PROSITE entry PS01137
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS01137 |
| Entry name [info] | TATD_1 |
| Accession [info] | PS01137 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1995 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00836 |
Name and characterization of the entry
| Description [info] | TatD deoxyribonuclease family signature 1. |
| Pattern [info] |
[LIVMFY](2)-D-[STA]-H-x-H-[LIVMFP]-[DN]. |
Numerical results [info]
| Total number of hits | 28 in 28 different sequences |
| Number of true positive hits | 19 in 19 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 9 in 9 different sequences |
| Number of false negative sequences | 32 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 67.86 % |
| Recall (true positives / (true positives + false negatives)) | 37.25 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
19 sequences
DTD3_SYNY3 (P73335), TATD2_HUMAN (Q93075), TATD_MYCTU (O08343), Y009_MYCGE (P47255), Y009_MYCPN (P78005), Y017_UREPA (Q9PRC8), Y081_HAEIN (P44500), Y1664_HAEIN (P45305), Y325_BUCBP (Q89AG7), Y343_BUCAP (Q8K9J1), Y355_BUCAI (P57436), Y454_HAEIN (P44718), Y761_METJA (Q58171), YABD_BACSU (P37545), YCFH_ECO57 (P0AFQ9), YCFH_ECOL6 (P0AFQ8), YCFH_ECOLI (P0AFQ7), YJJV_ECOLI (P39408), YMES_GEOSE (P23918)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
32 sequences
TATD1_ENCCU (Q8SW70), TATD1_ENTBH (B7XJI2), TATD1_VAIC1 (C4VAS3), TATD_CITK8 (A8ACY8), TATD_CITRI (D2TUZ4), TATD_CROS8 (A7MQN1), TATD_CROTZ (C9XTA5), TATD_DICD3 (E0SLH6), TATD_ECOLI (P27859), TATD_EDWPI (D0Z9R0), TATD_ENT38 (A4WFX9), TATD_ENTLS (E3G381), TATD_ERWAE (D4ICL5), TATD_ERWBE (D8MKW4), TATD_ERWT9 (B2VG45), TATD_ESCF3 (B7LTZ5), TATD_KLEP3 (B5XYH5), TATD_MUSP7 (C6C4V4), TATD_PANAM (D4GGR2), TATD_PANSA (E6WHK1), TATD_PANVC (E1SKR8), TATD_PECAS (Q6DAQ1), TATD_PECCP (C6DI71), TATD_PECPW (D0KC77), TATD_RAHSY (E8XYF5), TATD_SALTY (Q9L6M2), TATD_SERP5 (A8G8C4), TATD_SHIF8 (Q0SZ31), TATD_YERPY (B1JP69), Y1582_METJA (Q58977), YBF5_YEAST (P34220), YNF8_SCHPO (Q9UUF1)» more |
| UniProtKB/Swiss-Prot False positive sequences |
9 sequences
ADEC_LACDA (Q1G825), ALLB_STRAW (Q82LL4), ALLB_STRCO (Q9RKU5), ALN1_DICDI (Q54SV3), ALN2_DICDI (Q55C91), ALN_YEAST (P32375), ATZC_PSESD (O52063), NOD2_MOUSE (Q8K3Z0), RDRP_BMV(P03594)» more |
| PDB [Detailed view] |
2 PDB
1YIX; 1ZZM |