PROSITE entry PS01139

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PURL: https://purl.expasy.org/prosite/signature/PS01139

Direct ScanProsite submission

General information about the entry

Entry name [info]	BMC_1
Accession [info]	PS01139
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00876

Name and characterization of the entry

Description [info]	Bacterial microcompartment (BMC) domain signature.
Pattern [info]	D-x(0,1)-M-x-K-[SAG](2)-x-[IV]-x-[LIVM]-[LIVMA]-[GCSY]-x(4)-[GDE]- [SGPDR]-[GA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.

Total number of hits	40 in 37 different sequences
Number of true positive hits	40 in 37 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	0
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	100.00 %

Comments [info]

Taxonomic range [info]	Prokaryotes (Bacteria)
Maximum number of repetitions [info]	2
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

37 sequences

BMCH_HALO1  (D0LID5), CCMK1_SYNY3 (P72760), CCMK1_THEVB (Q8DKB3),

CCMK2_SYNE7 (Q03511), CCMK2_SYNY3 (P72761), CCMK2_THEVB (Q8DKB2), 
CCMK3_HALP7 (K9Y7V9), CCMK3_SYNY3 (P73406), CCMK4_SYNE7 (Q31RK2), 
CCMK4_SYNY3 (P73407), CCMK_PICP2  (O30709), CCMO_SYNE7  (P46205), 
CCMO_SYNP6  (P23656), CCMO_SYNY3  (Q55121), CSOS1_PARMW (P0A329), 
CSOS1_PROMA (P0A328), CSOS1_PROMM (Q7V6F7), CSOS1_PROMP (Q7V2D1), 
CSOS1_SYNPW (P0A330), CSOSA_HALNC (P45689), CSOSA_HYDCU (Q31HD3), 
CSOSB_HALNC (P45690), CSOSB_HYDCU (Q31HD2), CSOSC_HALNC (P45688), 
CSOSC_HYDCU (Q31HD1), CSOSE_PROMM (Q7V6G4), EUTK_ECOLI  (P76540), 
EUTK_SALTY  (Q9ZFU8), EUTM_CLOD6  (Q187N0), EUTM_ECOL6  (P0ABF5), 
EUTM_ECOLI  (P0ABF4), EUTM_SALTY  (P41791), PDUA_CITFR  (P0DUM6), 
PDUA_SALTI  (P0A1C8), PDUA_SALTY  (P0A1C7), PDUJ_CITFR  (P0DUV5), 
PDUJ_SALTY  (H9L478)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

PDB
[Detailed view]

52 PDB

pdb_00002a10; pdb_00002a18; pdb_00002a1b; pdb_00002ewh; pdb_00002g13; pdb_00003bn4; pdb_00003cim; pdb_00003dn9; pdb_00003dnc; pdb_00003gv2; pdb_00003h8y; pdb_00003i6p; pdb_00003mpw; pdb_00003mpy; pdb_00003ngk; pdb_00003ssq; pdb_00003ssr; pdb_00003sss; pdb_00004axj; pdb_00004liw; pdb_00004ox6; pdb_00004ox7; pdb_00004ox8; pdb_00005djb; pdb_00005v74; pdb_00006mzu; pdb_00006mzv; pdb_00006mzx; pdb_00006mzy; pdb_00006n06; pdb_00006n07; pdb_00006n09; pdb_00006n0f; pdb_00006n0g; pdb_00006ner; pdb_00006nlu; pdb_00006scr; pdb_00007ckb; pdb_00007ckc; pdb_00008b0y; pdb_00008b11; pdb_00008b12; pdb_00008wxb; pdb_00008yvc; pdb_00008yvd; pdb_00008yve; pdb_00008yvf; pdb_00008yvi; pdb_00008yxu; pdb_00009f0h; pdb_00009iv3; pdb_00009iv7
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