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PROSITE entry PS01139

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General information about the entry

Entry name [info]	BMC_1
Accession [info]	PS01139
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00876

Name and characterization of the entry

Description [info]	Bacterial microcompartment (BMC) domain signature.
Pattern [info]	D-x(0,1)-M-x-K-[SAG](2)-x-[IV]-x-[LIVM]-[LIVMA]-[GCSY]-x(4)-[GDE]- [SGPDR]-[GA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.

Total number of hits	40 in 37 different sequences
Number of true positive hits	40 in 37 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	0
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	100.00 %

Comments [info]

Taxonomic range [info]	Prokaryotes (Bacteria)
Maximum number of repetitions [info]	2
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

37 sequences

BMCH_HALO1  (D0LID5), CCMK1_SYNY3 (P72760), CCMK1_THEVB (Q8DKB3),

CCMK2_SYNE7 (Q03511), CCMK2_SYNY3 (P72761), CCMK2_THEVB (Q8DKB2), 
CCMK3_HALP7 (K9Y7V9), CCMK3_SYNY3 (P73406), CCMK4_SYNE7 (Q31RK2), 
CCMK4_SYNY3 (P73407), CCMK_PICP2  (O30709), CCMO_SYNE7  (P46205), 
CCMO_SYNP6  (P23656), CCMO_SYNY3  (Q55121), CSOS1_PARMW (P0A329), 
CSOS1_PROMA (P0A328), CSOS1_PROMM (Q7V6F7), CSOS1_PROMP (Q7V2D1), 
CSOS1_SYNPW (P0A330), CSOSA_HALNC (P45689), CSOSA_HYDCU (Q31HD3), 
CSOSB_HALNC (P45690), CSOSB_HYDCU (Q31HD2), CSOSC_HALNC (P45688), 
CSOSC_HYDCU (Q31HD1), CSOSE_PROMM (Q7V6G4), EUTK_ECOLI  (P76540), 
EUTK_SALTY  (Q9ZFU8), EUTM_CLOD6  (Q187N0), EUTM_ECOL6  (P0ABF5), 
EUTM_ECOLI  (P0ABF4), EUTM_SALTY  (P41791), PDUA_CITFR  (P0DUM6), 
PDUA_SALTI  (P0A1C8), PDUA_SALTY  (P0A1C7), PDUJ_CITFR  (P0DUV5), 
PDUJ_SALTY  (H9L478)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
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[Clustal format, plain text] [Fasta format]
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PDB
[Detailed view]

43 PDB

2A10; 2A18; 2A1B; 2EWH; 2G13; 3BN4; 3CIM; 3DN9; 3DNC; 3GV2; 3H8Y; 3I6P; 3MPW; 3MPY; 3NGK; 3SSQ; 3SSR; 3SSS; 4AXJ; 4LIW; 4OX6; 4OX7; 4OX8; 5DJB; 5V74; 6MZU; 6MZV; 6MZX; 6MZY; 6N06; 6N07; 6N09; 6N0F; 6N0G; 6NER; 6NLU; 6SCR; 7CKB; 7CKC; 8B0Y; 8B11; 8B12; 8WXB
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