Home  |  Contact
Entry: PS01139

General information about the entry

Entry name [info] BMC_1
Accession [info] PS01139
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE;
10-FEB-2021 INFO UPDATE.
PROSITE Doc. [info] PDOC00876

Name and characterization of the entry

Description [info] Bacterial microcompartment (BMC) domain signature.
Pattern [info] 
D-x(0,1)-M-x-K-[SAG](2)-x-[IV]-x-[LIVM]-[LIVMA]-[GCSY]-x(4)-[GDE]-
[SGPDR]-[GA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2021_01 which contains 564'277 sequence entries.


Total number of hits 35 in 32 different sequences
Number of true positive hits 35 in 32 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 32 sequences 

CCMK1_SYNY3 (P72760    ), CCMK1_THEEB (Q8DKB3    ), CCMK2_SYNE7 (Q03511    ), 

CCMK2_SYNY3 (P72761    ), CCMK2_THEEB (Q8DKB2    ), CCMK3_HALP7 (K9Y7V9    ), 
CCMK3_SYNY3 (P73406    ), CCMK4_SYNE7 (Q31RK2    ), CCMK4_SYNY3 (P73407    ), 
CCMK_SYNP2  (O30709    ), CCMO_SYNE7  (P46205    ), CCMO_SYNP6  (P23656    ), 
CCMO_SYNY3  (Q55121    ), CSOS1_PROMA (P0A328    ), CSOS1_PROMM (Q7V6F7    ), 
CSOS1_PROMP (Q7V2D1    ), CSOS1_SYNPW (P0A330    ), CSOS1_SYNPX (P0A329    ), 
CSOSA_HALNC (P45689    ), CSOSA_HYDCU (Q31HD3    ), CSOSB_HALNC (P45690    ), 
CSOSB_HYDCU (Q31HD2    ), CSOSC_HALNC (P45688    ), CSOSC_HYDCU (Q31HD1    ), 
CSOSE_PROMM (Q7V6G4    ), EUTK_ECOLI  (P76540    ), EUTK_SALTY  (Q9ZFU8    ), 
EUTM_ECOL6  (P0ABF5    ), EUTM_ECOLI  (P0ABF4    ), EUTM_SALTY  (P41791    ), 
PDUA_SALTI  (P0A1C8    ), PDUA_SALTY  (P0A1C7    )
» more

PDB
[Detailed view]		 23 PDB

2A10; 2A18; 2A1B; 2EWH; 2G13; 3BN4; 3CIM; 3DN9; 3DNC; 3GV2; 3H8Y; 3I6P; 3MPW; 3MPY; 3NGK; 3SSQ; 3SSR; 3SSS; 4LIW; 4OX6; 4OX7; 4OX8; 6SCR
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission