PROSITE entry PS01153
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General information about the entry
| Entry name [info] | NOL1_NOP2_SUN |
| Accession [info] | PS01153 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00888 |
Name and characterization of the entry
| Description [info] | NOL1/NOP2/sun family signature. |
| Pattern [info] |
[FV]-[DQ]-[KRA]-[LIVMA]-L-x-D-[AV]-P-C-[ST]-[GA]. |
Numerical results [info]
| Total number of hits | 163 in 163 different sequences |
| Number of true positive hits | 163 in 163 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 43 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 79.13 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
163 sequences
NCL1_YEAST (P38205), NOP2A_ARATH (Q9FG73), NOP2B_ARATH (Q8VYM6), NOP2C_ARATH (Q84MA1), NOP2_HUMAN (P46087), NOP2_MOUSE (Q922K7), NOP2_SCHPO (O94268), NOP2_YEAST (P40991), NSUN1_CAEEL (Q9TYV5), NSUN2_DROME (Q9W4M9), NSUN6_HUMAN (Q8TEA1), RSMB_BACSU (P94464), RSMB_CITK8 (A8AQI3), RSMB_COXBU (P45679), RSMB_CROS8 (A7MPE7), RSMB_ECO24 (A7ZSH7), RSMB_ECO27 (B7UK12), RSMB_ECO45 (B7MCQ4), RSMB_ECO55 (B7LHZ0), RSMB_ECO57 (Q8XEE5), RSMB_ECO5E (B5YT08), RSMB_ECO7I (B7NLK8), RSMB_ECO81 (B7N0S9), RSMB_ECO8A (B7M0Z4), RSMB_ECOBW (C4ZUE3), RSMB_ECODH (B1X6E1), RSMB_ECOHS (A8A593), RSMB_ECOK1 (A1AGI0), RSMB_ECOL5 (Q0TCH3), RSMB_ECOL6 (Q8FD12), RSMB_ECOLC (B1IQ11), RSMB_ECOLI (P36929), RSMB_ECOLU (B7NDR0), RSMB_ECOSE (B6I202), RSMB_ECOSM (B1LGP5), RSMB_ECOUT (Q1R644), RSMB_ENT38 (A4WF97), RSMB_ERWT9 (B2VK95), RSMB_ESCF3 (B7LRQ5), RSMB_HAEDU (Q7VKC4), RSMB_HAEIN (P44788), RSMB_KLEP3 (B5XNC2), RSMB_KLEP7 (A6TEU2), RSMB_PASMU (Q9CKP7), RSMB_PECAS (Q6D000), RSMB_PECCP (C6DFR7), RSMB_PHOLL (Q7MYI0), RSMB_PROMH (B4F1L5), RSMB_PSEAE (Q9I7A9), RSMB_PSEPK (Q88RR3), RSMB_PSESM (Q88B41), RSMB_SALA4 (B5F7R5), RSMB_SALAR (A9MN78), RSMB_SALCH (Q57J62), RSMB_SALDC (B5FJI4), RSMB_SALEP (B5R1E5), RSMB_SALG2 (B5RH47), RSMB_SALHS (B4TJX9), RSMB_SALNS (B4SUR0), RSMB_SALPA (Q5PIT6), RSMB_SALPB (A9N8B3), RSMB_SALPC (C0PZV1), RSMB_SALPK (B5BGV5), RSMB_SALSV (B4TXB2), RSMB_SALTI (Q8Z1X1), RSMB_SALTY (Q8ZLM5), RSMB_SERP5 (A8GKG7), RSMB_SHEON (Q8EKR0), RSMB_SHIB3 (B2U2Q6), RSMB_SHIBS (Q31VY8), RSMB_SHIDS (Q32B61), RSMB_SHIF8 (Q0T014), RSMB_SHIFL (Q7UBD3), RSMB_SHISS (Q3YWX1), RSMB_SODGM (Q2NQQ2), RSMB_SYNY3 (P72943), RSMB_VIBCH (Q9KVU5), RSMB_VIBPA (Q87KD3), RSMB_VIBVU (Q8DDE5), RSMB_VIBVY (Q7MGK4), RSMB_XANAC (Q8PG22), RSMB_XANCP (Q8P4G1), RSMB_XYLFA (Q9PEV0), RSMB_XYLFT (Q87AR1), RSMB_YERE8 (A1JRZ3), RSMB_YERP3 (A7FNK4), RSMB_YERPA (Q1C2X7), RSMB_YERPB (B2K506), RSMB_YERPE (Q8ZJ81), RSMB_YERPG (A9R925), RSMB_YERPN (Q1CCX4), RSMB_YERPP (A4TH21), RSMB_YERPS (Q664V2), RSMB_YERPY (B1JJH6), RSMF_AERHH (A0KKI5), RSMF_AERS4 (A4SMI9), RSMF_CITK8 (A8AFL6), RSMF_CROS8 (A7MKH5), RSMF_ECO24 (A7ZMV8), RSMF_ECO27 (B7USL2), RSMF_ECO45 (B7MBP2), RSMF_ECO55 (B7L7N7), RSMF_ECO57 (Q8XCL9), RSMF_ECO5E (B5YQX9), RSMF_ECO7I (B7NS84), RSMF_ECO81 (B7MVW5), RSMF_ECO8A (B7M2B1), RSMF_ECOBW (C4ZZJ2), RSMF_ECODH (B1XHA3), RSMF_ECOHS (A8A133), RSMF_ECOK1 (A1AC00), RSMF_ECOL5 (Q0TGZ7), RSMF_ECOL6 (Q8FGS9), RSMF_ECOLC (B1J0Q3), RSMF_ECOLI (P76273), RSMF_ECOLU (B7NBI3), RSMF_ECOSE (B6IBR3), RSMF_ECOSM (B1LD37), RSMF_ECOUT (Q1RAV2), RSMF_ENT38 (A4WBJ4), RSMF_ERWT9 (B2VJ83), RSMF_ESCF3 (B7LPL0), RSMF_KLEP3 (B5XQ35), RSMF_KLEP7 (A6TB06), RSMF_PECAS (Q6D4C8), RSMF_PECCP (C6DFU6), RSMF_PSYIN (A1SWV0), RSMF_SALA4 (B5F3P3), RSMF_SALAR (A9MNH4), RSMF_SALCH (Q57NF9), RSMF_SALDC (B5FTI4), RSMF_SALEP (B5R2S1), RSMF_SALG2 (B5R8V2), RSMF_SALHS (B4TKI0), RSMF_SALNS (B4SV89), RSMF_SALPA (Q5PHN5), RSMF_SALPB (A9MV57), RSMF_SALPC (C0Q2Y5), RSMF_SALPK (B5BHA6), RSMF_SALSV (B4TY18), RSMF_SALTI (Q8Z662), RSMF_SALTY (Q8ZNZ2), RSMF_SERP5 (A8GDM6), RSMF_SHESH (A8FWM8), RSMF_SHEWM (B1KQN1), RSMF_SHIB3 (B2U477), RSMF_SHIBS (Q321Y0), RSMF_SHIDS (Q32F19), RSMF_SHIF8 (Q0T529), RSMF_SHIFL (Q83RJ3), RSMF_SHISS (Q3Z2H4), RSMF_VIBA3 (B7VNJ8), RSMF_VIBC1 (A7N0K6), RSMF_VIBCH (Q9KRY1), RSMF_VIBCM (C3LMI5), RSMF_VIBPA (Q87PA5), RSMF_VIBVU (Q8D9F3), RSMF_VIBVY (Q7MKY6), TRM4A_SCHPO (Q9HGQ2), TRM4B_SCHPO (O13935), TRM4_METJA (Q60343), Y1407_MYCTO (P9WGX2), Y1407_MYCTU (P9WGX3)» more
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| UniProtKB/Swiss-Prot False negative sequences |
43 sequences
NSUN2_CHICK (Q5ZLV4), NSUN2_HUMAN (Q08J23), NSUN2_MOUSE (Q1HFZ0), NSUN2_XENLA (Q4V7N2), NSUN2_XENTR (Q28E61), NSUN3_BOVIN (Q0P5D8), NSUN3_DANRE (Q4KMK0), NSUN3_HUMAN (Q9H649), NSUN3_MOUSE (Q8CCT7), NSUN4_BOVIN (Q0V8R7), NSUN4_HUMAN (Q96CB9), NSUN4_MOUSE (Q9CZ57), NSUN4_XENLA (Q5M7E3), NSUN4_XENTR (Q66KI9), NSUN5_HUMAN (Q96P11), NSUN6_MOUSE (Q7TS68), NSUN7_HUMAN (Q8NE18), NSUN7_MACFA (Q4R7Q1), NSUN7_MOUSE (Q14AW5), RCM1_SCHPO (O14039), RSMF_ALIF1 (Q5E5C7), RSMF_ALIFM (B5FE06), RSMF_ALISL (B6ELC0), RSMF_PHOPR (Q6LQU5), RSMF_PSET1 (Q3IHA0), RSMF_SHEAM (A1S788), RSMF_SHEB2 (B8E968), RSMF_SHEB5 (A3D5D5), RSMF_SHEB8 (A6WP46), RSMF_SHEB9 (A9L4E6), RSMF_SHEDO (Q12MJ8), RSMF_SHEFN (Q081I3), RSMF_SHEHH (B0TIZ6), RSMF_SHELP (A3QDA2), RSMF_SHEON (Q8EDY2), RSMF_SHEPA (A8H3W2), RSMF_SHEPC (A4Y7J8), RSMF_SHEPW (B8CPH7), RSMF_SHESA (A0KW34), RSMF_SHESM (Q0HJM6), RSMF_SHESR (Q0HVX2), RSMF_SHESW (A1RIZ0), TRCM_PYRAB (Q9V106)» more |
| PDB [Detailed view] |
24 PDB
1SQF; 1SQG; 2FRX; 3A4T; 3AJD; 5WWQ; 5WWR; 5WWS; 5WWT; 6ELZ; 6EM5; 7NAC; 7OHR; 7R6K; 7R7A; 7R7C; 8ESQ; 8ESR; 8FKT; 8FKU; 8FKV; 8FKW; 8FKX; 8FKY » more |