 |
|
| Entry: PS01153 |
General information about the entry
| Entry name [info] | NOL1_NOP2_SUN |
| Accession [info] | PS01153 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE; 02-JUN-2021 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00888 |
Name and characterization of the entry
| Description [info] | NOL1/NOP2/sun family signature. |
| Pattern [info] |
[FV]-[DQ]-[KRA]-[LIVMA]-L-x-D-[AV]-P-C-[ST]-[GA]. |
Numerical results [info]
| Total number of hits | 163 in 163 different sequences |
| Number of true positive hits | 163 in 163 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 43 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 79.13 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
163 sequences
NCL1_YEAST (P38205 ), NOP2A_ARATH (Q9FG73 ), NOP2B_ARATH (Q8VYM6 ), NOP2C_ARATH (Q84MA1 ), NOP2_HUMAN (P46087 ), NOP2_MOUSE (Q922K7 ), NOP2_SCHPO (O94268 ), NOP2_YEAST (P40991 ), NSUN1_CAEEL (Q9TYV5 ), NSUN2_DROME (Q9W4M9 ), NSUN6_HUMAN (Q8TEA1 ), RSMB_BACSU (P94464 ), RSMB_CITK8 (A8AQI3 ), RSMB_COXBU (P45679 ), RSMB_CROS8 (A7MPE7 ), RSMB_ECO24 (A7ZSH7 ), RSMB_ECO27 (B7UK12 ), RSMB_ECO45 (B7MCQ4 ), RSMB_ECO55 (B7LHZ0 ), RSMB_ECO57 (Q8XEE5 ), RSMB_ECO5E (B5YT08 ), RSMB_ECO7I (B7NLK8 ), RSMB_ECO81 (B7N0S9 ), RSMB_ECO8A (B7M0Z4 ), RSMB_ECOBW (C4ZUE3 ), RSMB_ECODH (B1X6E1 ), RSMB_ECOHS (A8A593 ), RSMB_ECOK1 (A1AGI0 ), RSMB_ECOL5 (Q0TCH3 ), RSMB_ECOL6 (Q8FD12 ), RSMB_ECOLC (B1IQ11 ), RSMB_ECOLI (P36929 ), RSMB_ECOLU (B7NDR0 ), RSMB_ECOSE (B6I202 ), RSMB_ECOSM (B1LGP5 ), RSMB_ECOUT (Q1R644 ), RSMB_ENT38 (A4WF97 ), RSMB_ERWT9 (B2VK95 ), RSMB_ESCF3 (B7LRQ5 ), RSMB_HAEDU (Q7VKC4 ), RSMB_HAEIN (P44788 ), RSMB_KLEP3 (B5XNC2 ), RSMB_KLEP7 (A6TEU2 ), RSMB_PASMU (Q9CKP7 ), RSMB_PECAS (Q6D000 ), RSMB_PECCP (C6DFR7 ), RSMB_PHOLL (Q7MYI0 ), RSMB_PROMH (B4F1L5 ), RSMB_PSEAE (Q9I7A9 ), RSMB_PSEPK (Q88RR3 ), RSMB_PSESM (Q88B41 ), RSMB_SALA4 (B5F7R5 ), RSMB_SALAR (A9MN78 ), RSMB_SALCH (Q57J62 ), RSMB_SALDC (B5FJI4 ), RSMB_SALEP (B5R1E5 ), RSMB_SALG2 (B5RH47 ), RSMB_SALHS (B4TJX9 ), RSMB_SALNS (B4SUR0 ), RSMB_SALPA (Q5PIT6 ), RSMB_SALPB (A9N8B3 ), RSMB_SALPC (C0PZV1 ), RSMB_SALPK (B5BGV5 ), RSMB_SALSV (B4TXB2 ), RSMB_SALTI (Q8Z1X1 ), RSMB_SALTY (Q8ZLM5 ), RSMB_SERP5 (A8GKG7 ), RSMB_SHEON (Q8EKR0 ), RSMB_SHIB3 (B2U2Q6 ), RSMB_SHIBS (Q31VY8 ), RSMB_SHIDS (Q32B61 ), RSMB_SHIF8 (Q0T014 ), RSMB_SHIFL (Q7UBD3 ), RSMB_SHISS (Q3YWX1 ), RSMB_SODGM (Q2NQQ2 ), RSMB_SYNY3 (P72943 ), RSMB_VIBCH (Q9KVU5 ), RSMB_VIBPA (Q87KD3 ), RSMB_VIBVU (Q8DDE5 ), RSMB_VIBVY (Q7MGK4 ), RSMB_XANAC (Q8PG22 ), RSMB_XANCP (Q8P4G1 ), RSMB_XYLFA (Q9PEV0 ), RSMB_XYLFT (Q87AR1 ), RSMB_YERE8 (A1JRZ3 ), RSMB_YERP3 (A7FNK4 ), RSMB_YERPA (Q1C2X7 ), RSMB_YERPB (B2K506 ), RSMB_YERPE (Q8ZJ81 ), RSMB_YERPG (A9R925 ), RSMB_YERPN (Q1CCX4 ), RSMB_YERPP (A4TH21 ), RSMB_YERPS (Q664V2 ), RSMB_YERPY (B1JJH6 ), RSMF_AERHH (A0KKI5 ), RSMF_AERS4 (A4SMI9 ), RSMF_CITK8 (A8AFL6 ), RSMF_CROS8 (A7MKH5 ), RSMF_ECO24 (A7ZMV8 ), RSMF_ECO27 (B7USL2 ), RSMF_ECO45 (B7MBP2 ), RSMF_ECO55 (B7L7N7 ), RSMF_ECO57 (Q8XCL9 ), RSMF_ECO5E (B5YQX9 ), RSMF_ECO7I (B7NS84 ), RSMF_ECO81 (B7MVW5 ), RSMF_ECO8A (B7M2B1 ), RSMF_ECOBW (C4ZZJ2 ), RSMF_ECODH (B1XHA3 ), RSMF_ECOHS (A8A133 ), RSMF_ECOK1 (A1AC00 ), RSMF_ECOL5 (Q0TGZ7 ), RSMF_ECOL6 (Q8FGS9 ), RSMF_ECOLC (B1J0Q3 ), RSMF_ECOLI (P76273 ), RSMF_ECOLU (B7NBI3 ), RSMF_ECOSE (B6IBR3 ), RSMF_ECOSM (B1LD37 ), RSMF_ECOUT (Q1RAV2 ), RSMF_ENT38 (A4WBJ4 ), RSMF_ERWT9 (B2VJ83 ), RSMF_ESCF3 (B7LPL0 ), RSMF_KLEP3 (B5XQ35 ), RSMF_KLEP7 (A6TB06 ), RSMF_PECAS (Q6D4C8 ), RSMF_PECCP (C6DFU6 ), RSMF_PSYIN (A1SWV0 ), RSMF_SALA4 (B5F3P3 ), RSMF_SALAR (A9MNH4 ), RSMF_SALCH (Q57NF9 ), RSMF_SALDC (B5FTI4 ), RSMF_SALEP (B5R2S1 ), RSMF_SALG2 (B5R8V2 ), RSMF_SALHS (B4TKI0 ), RSMF_SALNS (B4SV89 ), RSMF_SALPA (Q5PHN5 ), RSMF_SALPB (A9MV57 ), RSMF_SALPC (C0Q2Y5 ), RSMF_SALPK (B5BHA6 ), RSMF_SALSV (B4TY18 ), RSMF_SALTI (Q8Z662 ), RSMF_SALTY (Q8ZNZ2 ), RSMF_SERP5 (A8GDM6 ), RSMF_SHESH (A8FWM8 ), RSMF_SHEWM (B1KQN1 ), RSMF_SHIB3 (B2U477 ), RSMF_SHIBS (Q321Y0 ), RSMF_SHIDS (Q32F19 ), RSMF_SHIF8 (Q0T529 ), RSMF_SHIFL (Q83RJ3 ), RSMF_SHISS (Q3Z2H4 ), RSMF_VIBA3 (B7VNJ8 ), RSMF_VIBCB (A7N0K6 ), RSMF_VIBCH (Q9KRY1 ), RSMF_VIBCM (C3LMI5 ), RSMF_VIBPA (Q87PA5 ), RSMF_VIBVU (Q8D9F3 ), RSMF_VIBVY (Q7MKY6 ), TRM4A_SCHPO (Q9HGQ2 ), TRM4B_SCHPO (O13935 ), TRM4_METJA (Q60343 ), Y1407_MYCTO (P9WGX2 ), Y1407_MYCTU (P9WGX3 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
43 sequences
NSUN2_CHICK (Q5ZLV4 ), NSUN2_HUMAN (Q08J23 ), NSUN2_MOUSE (Q1HFZ0 ), NSUN2_XENLA (Q4V7N2 ), NSUN2_XENTR (Q28E61 ), NSUN3_BOVIN (Q0P5D8 ), NSUN3_DANRE (Q4KMK0 ), NSUN3_HUMAN (Q9H649 ), NSUN3_MOUSE (Q8CCT7 ), NSUN4_BOVIN (Q0V8R7 ), NSUN4_HUMAN (Q96CB9 ), NSUN4_MOUSE (Q9CZ57 ), NSUN4_XENLA (Q5M7E3 ), NSUN4_XENTR (Q66KI9 ), NSUN5_HUMAN (Q96P11 ), NSUN6_MOUSE (Q7TS68 ), NSUN7_HUMAN (Q8NE18 ), NSUN7_MACFA (Q4R7Q1 ), NSUN7_MOUSE (Q14AW5 ), RCM1_SCHPO (O14039 ), RSMF_ALIF1 (Q5E5C7 ), RSMF_ALIFM (B5FE06 ), RSMF_ALISL (B6ELC0 ), RSMF_PHOPR (Q6LQU5 ), RSMF_PSET1 (Q3IHA0 ), RSMF_SHEAM (A1S788 ), RSMF_SHEB2 (B8E968 ), RSMF_SHEB5 (A3D5D5 ), RSMF_SHEB8 (A6WP46 ), RSMF_SHEB9 (A9L4E6 ), RSMF_SHEDO (Q12MJ8 ), RSMF_SHEFN (Q081I3 ), RSMF_SHEHH (B0TIZ6 ), RSMF_SHELP (A3QDA2 ), RSMF_SHEON (Q8EDY2 ), RSMF_SHEPA (A8H3W2 ), RSMF_SHEPC (A4Y7J8 ), RSMF_SHEPW (B8CPH7 ), RSMF_SHESA (A0KW34 ), RSMF_SHESM (Q0HJM6 ), RSMF_SHESR (Q0HVX2 ), RSMF_SHESW (A1RIZ0 ), TRCM_PYRAB (Q9V106 )» more |
| PDB [Detailed view] |
11 PDB
1SQF; 1SQG; 2FRX; 3A4T; 3AJD; 5WWQ; 5WWR; 5WWS; 5WWT; 6ELZ; 6EM5 |
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission