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Entry: PS01154

General information about the entry

Entry name [info] RNA_POL_L_13KD
Accession [info] PS01154
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE;
17-JUN-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00889

Name and characterization of the entry

Description [info] RNA polymerases L / 13 to 16 Kd subunits signature.
Pattern [info]
[LIVMFA]-x(2)-[EYD]-x-[HYN]-[ST]-[LIVMFY]-x-[NSTR]-x-[LIV]-x(3)-[LIVA]-
x(4,5)-[VPG]-x(4)-[FY]-x(3)-[HPY]-[PEV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_03 which contains 562'755 sequence entries.


Total number of hits 69 in 69 different sequences
Number of true positive hits 69 in 69 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.52 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
69 sequences

NRPBB_ARATH (Q38859    ), RPAC2_BOVIN (Q1RMG8    ), RPAC2_CAEBR (Q61IX2    ), 
RPAC2_CAEEL (P34476    ), RPAC2_DANRE (Q6DRI4    ), RPAC2_DROME (Q9VIZ0    ), 
RPAC2_HUMAN (P0DPB6    ), RPAC2_MOUSE (P97304    ), RPAC2_SCHPO (Q09177    ), 
RPAC2_XENLA (Q5XK67    ), RPAC2_YEAST (P28000    ), RPB11_ANOGA (Q7PVQ9    ), 
RPB11_BOVIN (Q32P79    ), RPB11_CAEBR (Q60SM4    ), RPB11_CAEEL (Q9XVH6    ), 
RPB11_DROME (Q9VJE4    ), RPB11_HUMAN (P52435    ), RPB11_MOUSE (O08740    ), 
RPB11_PLABA (Q4YZZ7    ), RPB11_PLACH (Q4XS21    ), RPB11_PLAF7 (Q8IER7    ), 
RPB11_SCHPO (P87123    ), RPB11_YEAST (P38902    ), RPB1B_HUMAN (Q9GZM3    ), 
RPB1C_HUMAN (Q9H1A7    ), RPC19_DICDI (Q54ES6    ), RPOL_AERPE  (Q9YEZ1    ), 
RPOL_ARCFU  (O30032    ), RPOL_HALLT  (B9LTT8    ), RPOL_HALMA  (Q5V2C7    ), 
RPOL_HALS3  (B0R4B1    ), RPOL_HALSA  (Q9HR53    ), RPOL_HALWD  (Q18JI2    ), 
RPOL_KORCO  (B1L7Q7    ), RPOL_METAC  (Q8TSS4    ), RPOL_METBF  (Q46C10    ), 
RPOL_METBU  (Q12W27    ), RPOL_METJA  (Q57832    ), RPOL_METKA  (Q8TZ81    ), 
RPOL_METM5  (A4FZS6    ), RPOL_METM6  (A9A836    ), RPOL_METM7  (A6VIQ1    ), 
RPOL_METMA  (Q8PVT0    ), RPOL_METMP  (Q6M0K9    ), RPOL_METS5  (A4YHV0    ), 
RPOL_METTH  (O27372    ), RPOL_METVS  (A6URP9    ), RPOL_NANEQ  (Q74MN9    ), 
RPOL_NATPD  (Q3INY0    ), RPOL_PICTO  (Q6L204    ), RPOL_PYRAB  (Q9V2M4    ), 
RPOL_PYRAE  (Q8ZW46    ), RPOL_PYRFU  (Q8U4N1    ), RPOL_PYRHO  (P57671    ), 
RPOL_SACS2  (Q980K0    ), RPOL_SULAC  (P46217    ), RPOL_SULIA  (C3MZG6    ), 
RPOL_SULIK  (C4KIP6    ), RPOL_SULIL  (C3MRD1    ), RPOL_SULIM  (C3MXM0    ), 
RPOL_SULIN  (C3NFY8    ), RPOL_SULIY  (C3N7I8    ), RPOL_SULTO  (Q96YA7    ), 
RPOL_THEAC  (Q9HIC5    ), RPOL_THEGJ  (C5A5J3    ), RPOL_THEKO  (Q5JE88    ), 
RPOL_THEON  (B6YTH7    ), RPOL_THESM  (C6A1R5    ), RPOL_THEVO  (Q978F5    )
» more

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

RPB11_DICDI (Q86JJ5    ), RPOL_METAR  (Q0W8P1    ), RPOL_METTP  (A0B533    ), 
YR470_MIMIV (Q5UQD9    )
» more


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