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Entry: PS01171

General information about the entry

Entry name [info] RIBOSOMAL_L21E
Accession [info] PS01171
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00901

Name and characterization of the entry

Description [info] Ribosomal protein L21e signature.
Pattern [info] 
[GN]-[DEQ]-x-V-x(10,11)-[GVT]-x(2)-[FYHDN]-x(2)-[FY]-x-G-x-[TV]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 73 in 73 different sequences
Number of true positive hits 72 in 72 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 2
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 98.63 %
Recall (true positives / (true positives + false negatives)) 97.30 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 72 sequences 

RL211_ARATH (Q43291    ), RL212_ARATH (Q9FDZ9    ), RL21A_SCHPO (Q9UUC1    ), 

RL21A_YEAST (Q02753    ), RL21B_SCHPO (O42706    ), RL21B_YEAST (Q12672    ), 
RL21_AERPE  (P58077    ), RL21_ARCFU  (O28743    ), RL21_CAEEL  (P34334    ), 
RL21_CAPHI  (A5JSS2    ), RL21_CHILA  (Q6QN05    ), RL21_CYAPA  (O82574    ), 
RL21_DICDI  (Q54X53    ), RL21_ENCCU  (Q8SRW8    ), RL21_ENTHI  (P38653    ), 
RL21_HALMA  (P12734    ), RL21_HALS3  (B0R509    ), RL21_HALSA  (Q9HQG8    ), 
RL21_HALWD  (Q18G97    ), RL21_HUMAN  (P46778    ), RL21_IGNH4  (A8AAK8    ), 
RL21_KORCO  (B1L7A8    ), RL21_META3  (A6UT27    ), RL21_METAC  (Q8TQU3    ), 
RL21_METAR  (Q0W2E9    ), RL21_METB6  (A7I9H8    ), RL21_METBF  (Q466S9    ), 
RL21_METBU  (Q12XH4    ), RL21_METHJ  (Q2FS99    ), RL21_METJA  (P54013    ), 
RL21_METKA  (Q8TUU3    ), RL21_METLZ  (A2STS6    ), RL21_METM5  (A4G096    ), 
RL21_METM6  (A9A8J8    ), RL21_METM7  (A6VI82    ), RL21_METMA  (Q8PU21    ), 
RL21_METMJ  (A3CWY7    ), RL21_METMP  (Q6M125    ), RL21_METPE  (B8GEV3    ), 
RL21_METS3  (A5UN04    ), RL21_METS5  (A4YCT6    ), RL21_METTH  (O27378    ), 
RL21_METTP  (A0B7V4    ), RL21_METVS  (A6UR83    ), RL21_MOUSE  (O09167    ), 
RL21_NANEQ  (Q74N21    ), RL21_NATPD  (Q3IPL7    ), RL21_PIG    (P49666    ), 
RL21_PYRAB  (Q9UZP1    ), RL21_PYRAE  (Q8ZTB5    ), RL21_PYRAR  (A4WLN2    ), 
RL21_PYRCJ  (A3MWX9    ), RL21_PYRFU  (Q8U217    ), RL21_PYRHO  (O74001    ), 
RL21_PYRNV  (B1Y9U2    ), RL21_PYUST  (P49667    ), RL21_RAT    (P20280    ), 
RL21_SACS2  (Q9UXE0    ), RL21_STAMF  (A3DML6    ), RL21_SULAC  (Q4JB11    ), 
RL21_SULIA  (C3N5P7    ), RL21_SULIK  (C4KHC6    ), RL21_SULIL  (C3MQ30    ), 
RL21_SULIM  (C3MVE8    ), RL21_SULIN  (C3NHD9    ), RL21_SULIY  (C3NEB3    ), 
RL21_SULTO  (Q975F2    ), RL21_TETTS  (Q23TC8    ), RL21_THEAC  (Q9HIN8    ), 
RL21_THEGJ  (C5A597    ), RL21_THEKO  (Q5JI51    ), RL21_THEVO  (Q97BZ1    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

RL21_METST  (Q2NE44    ), RL21_PYRIL  (A1RS24    )


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			2 sequences
			


			
RL21_SPIOL  (P82453    ), RL21_XENLA  (P49628    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			1 sequence
			


			
DGC_VIBC3   (A0A0H3AFM6)


				
	

	

		PDB
[Detailed view]		
		
			192 PDB
			


			1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 
			
				1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 
				1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 
				1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 
				3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 
				3G4S; 3G6E; 3G71; 3I55; 3I56; 3J6X; 3J6Y; 3J77; 3J78; 3J7O; 3J7P; 3J7Q; 
				3J7R; 3JCT; 3OW2; 4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 
				4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4B; 4V6I; 
				4V6U; 4V6X; 4V7F; 4V7R; 4V88; 4V8P; 4V8T; 4V8Y; 4V8Z; 4V91; 4V9F; 5AJ0; 
				5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FL8; 5GAK; 5H4P; 
				5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 
				5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 6EK0; 
				6ELZ; 6EM5; 6FT6; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 
				6N8J; 6N8K; 6N8L; 6N8M; 6N8N; 6N8O; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 
				6OM7; 6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 
				6S47; 6SNT; 6SV4; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TNU; 6Y0G; 6Y2L; 6Y57
			
			

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