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PROSITE entry PS01171


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General information about the entry

Entry name [info] RIBOSOMAL_L21E
Accession [info] PS01171
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00901

Name and characterization of the entry

Description [info] Ribosomal protein L21e signature.
Pattern [info] 
[GN]-[DEQ]-x-V-x(10,11)-[GVT]-x(2)-[FYHDN]-x(2)-[FY]-x-G-x-[TV]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 74 in 74 different sequences
Number of true positive hits 73 in 73 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 2
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 98.65 %
Recall (true positives / (true positives + false negatives)) 97.33 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 73 sequences 

RL211_ARATH (Q43291), RL212_ARATH (Q9FDZ9), RL21A_CANAL (A0A1D8PGY0), 

RL21A_SCHPO (Q9UUC1), RL21A_YEAST (Q02753), RL21B_SCHPO (O42706), 
RL21B_YEAST (Q12672), RL21_AERPE  (P58077), RL21_ARCFU  (O28743), 
RL21_CAEEL  (P34334), RL21_CAPHI  (A5JSS2), RL21_CHILA  (Q6QN05), 
RL21_CYAPA  (O82574), RL21_DICDI  (Q54X53), RL21_ENCCU  (Q8SRW8), 
RL21_ENTH1  (P38653), RL21_HALMA  (P12734), RL21_HALS3  (B0R509), 
RL21_HALSA  (Q9HQG8), RL21_HALWD  (Q18G97), RL21_HUMAN  (P46778), 
RL21_IGNH4  (A8AAK8), RL21_KORCO  (B1L7A8), RL21_META3  (A6UT27), 
RL21_METAC  (Q8TQU3), RL21_METAR  (Q0W2E9), RL21_METB6  (A7I9H8), 
RL21_METBF  (Q466S9), RL21_METBU  (Q12XH4), RL21_METHJ  (Q2FS99), 
RL21_METJA  (P54013), RL21_METKA  (Q8TUU3), RL21_METLZ  (A2STS6), 
RL21_METM5  (A4G096), RL21_METM6  (A9A8J8), RL21_METM7  (A6VI82), 
RL21_METMA  (Q8PU21), RL21_METMJ  (A3CWY7), RL21_METMP  (Q6M125), 
RL21_METPE  (B8GEV3), RL21_METS3  (A5UN04), RL21_METS5  (A4YCT6), 
RL21_METTH  (O27378), RL21_METTP  (A0B7V4), RL21_METVS  (A6UR83), 
RL21_MOUSE  (O09167), RL21_NANEQ  (Q74N21), RL21_NATPD  (Q3IPL7), 
RL21_PIG(P49666), RL21_PYRAB  (Q9UZP1), RL21_PYRAE  (Q8ZTB5), 
RL21_PYRAR  (A4WLN2), RL21_PYRCJ  (A3MWX9), RL21_PYRFU  (Q8U217), 
RL21_PYRHO  (O74001), RL21_PYRNV  (B1Y9U2), RL21_PYUST  (P49667), 
RL21_RAT(P20280), RL21_SACS2  (Q9UXE0), RL21_STAMF  (A3DML6), 
RL21_SULAC  (Q4JB11), RL21_SULIA  (C3N5P7), RL21_SULIK  (C4KHC6), 
RL21_SULIL  (C3MQ30), RL21_SULIM  (C3MVE8), RL21_SULIN  (C3NHD9), 
RL21_SULIY  (C3NEB3), RL21_SULTO  (Q975F2), RL21_TETTS  (Q23TC8), 
RL21_THEAC  (Q9HIN8), RL21_THEGJ  (C5A597), RL21_THEKO  (Q5JI51), 
RL21_THEVO  (Q97BZ1)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

RL21_METST  (Q2NE44), RL21_PYRIL  (A1RS24)


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			2 sequences
			


			
RL21_SPIOL  (P82453), RL21_XENLA  (P49628)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			1 sequence
			


			
DGC_VIBC3   (A0A0H3AFM6)


				
	

	

		PDB
[Detailed view]		
		
			319 PDB
			


			1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 
			
				1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 
				1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 
				1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 
				3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 
				3G4S; 3G6E; 3G71; 3I55; 3I56; 3J6X; 3J6Y; 3J77; 3J78; 3J7O; 3J7P; 3J7Q; 
				3J7R; 3JCT; 3OW2; 4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 
				4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4B; 4V6I; 
				4V6U; 4V6X; 4V7F; 4V7R; 4V88; 4V8P; 4V8T; 4V8Y; 4V8Z; 4V91; 4V9F; 5AJ0; 
				5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5GAK; 5H4P; 5I4L; 
				5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 
				5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 6ELZ; 6EM5; 
				6FT6; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6LQM; 6LSR; 
				6LSS; 6LU8; 6M62; 6N8J; 6N8K; 6N8L; 6N8M; 6N8N; 6N8O; 6OIG; 6OLE; 6OLF; 
				6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 6R84; 6R86; 
				6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SKF; 6SKG; 6SNT; 6SV4; 6SWA; 6T4Q; 6T7I; 
				6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6W6L; 6WOO; 6XA1; 6XIQ; 6XIR; 6Y0G; 6Y2L; 
				6Y57; 6Y6X; 6YLG; 6YLH; 6YLX; 6YLY; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZM7; 
				6ZME; 6ZMI; 6ZMO; 7AZY; 7B7D; 7BHP; 7BT6; 7BTB; 7CPU; 7CPV; 7F5S; 7LS1; 
				7LS2; 7MPI; 7MPJ; 7N8B; 7NAC; 7NRC; 7NRD; 7OF1; 7OH3; 7OHQ; 7OHT; 7OW7; 
				7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QEP; 7QVP; 7R7A; 7TOO; 7TOP; 7U0H; 7UG6; 
				7UOO; 7UQB; 7UQZ; 7V08; 7XNX; 7XNY; 7Z34; 7ZPQ; 7ZRS; 7ZS5; 7ZUW; 7ZUX; 
				7ZW0; 8A3D; 8AAF; 8AGT; 8AGU; 8AGV; 8AGW; 8AGX; 8AGZ; 8BIP; 8BJQ; 8BQD; 
				8BQX; 8ESQ; 8ESR; 8ETC; 8ETG; 8ETH; 8ETI; 8ETJ; 8EUG; 8EUI; 8EUP; 8EUY; 
				8FKP; 8FKQ; 8FKR; 8FKS; 8FKT; 8FKU; 8FKV; 8FKW; 8FKX; 8FKY; 8FKZ; 8FL0; 
				8FL2; 8FL3; 8FL4; 8FL6; 8FL7; 8FL9; 8FLA; 8FLB; 8FLC; 8FLD; 8FLE; 8FLF; 
				8G5Y; 8G5Z; 8G60; 8G61; 8G6J; 8GLP; 8HFR
			
			

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