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Entry: PS01175

General information about the entry

Entry name [info] RIBONUCLEASE_II
Accession [info] PS01175
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2001 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00904

Name and characterization of the entry

Description [info] Ribonuclease II family signature.
Pattern [info] 
[HI]-[FYE]-[GSTAM]-[LIVM]-x(4,5)-Y-[STALV]-x-[FWVAC]-[TV]-[SA]-P-[LIVMA]-
[RQ]-[KR]-[FY]-x-D-x(3)-[HQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 136 in 136 different sequences
Number of true positive hits 135 in 135 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 6
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.26 %
Recall (true positives / (true positives + false negatives)) 95.74 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 135 sequences 

CYT4_NEUCR  (P47950    ), DI32L_ARATH (Q0WPN0    ), DI3L1_BOVIN (A0JN80    ), 

DI3L1_DANRE (A2RV18    ), DI3L1_HUMAN (Q8TF46    ), DI3L1_MOUSE (Q8C0S1    ), 
DI3L1_PONAB (Q5R5N8    ), DI3L1_RAT   (Q5U2P0    ), DI3L1_XENLA (Q6GN11    ), 
DI3L1_XENTR (Q0P4R5    ), DI3L2_ARATH (P0DM58    ), DI3L2_CAEEL (Q09568    ), 
DI3L2_HUMAN (Q8IYB7    ), DI3L2_MOUSE (Q8CI75    ), DI3L2_SCHPO (O14040    ), 
DI3L2_XENTR (Q0V9R3    ), DIS3_SCHPO  (P37202    ), DSS1_YEAST  (P39112    ), 
RNB_ACTSZ   (A6VN85    ), RNB_AERHH   (A0KFR1    ), RNB_BAUCH   (Q1LTG8    ), 
RNB_BUCA5   (B8D959    ), RNB_BUCAI   (P57354    ), RNB_BUCAP   (Q8K9Q5    ), 
RNB_BUCAT   (B8D7G3    ), RNB_BUCBP   (Q89AM0    ), RNB_BUCCC   (Q057Q9    ), 
RNB_CITK8   (A8AG96    ), RNB_CROS8   (A7MMD8    ), RNB_ECO24   (A7ZLA9    ), 
RNB_ECO27   (B7UR96    ), RNB_ECO45   (B7MLW3    ), RNB_ECO55   (B7L4C3    ), 
RNB_ECO57   (Q8X7D6    ), RNB_ECO5E   (B5YZR8    ), RNB_ECO7I   (B7NVR1    ), 
RNB_ECO8A   (B7LY47    ), RNB_ECOBW   (C4ZTY2    ), RNB_ECODH   (B1XBN7    ), 
RNB_ECOHS   (A7ZZM6    ), RNB_ECOK1   (A1AAQ4    ), RNB_ECOL5   (Q0TI78    ), 
RNB_ECOL6   (Q8FHT6    ), RNB_ECOLC   (B1ITG7    ), RNB_ECOLI   (P30850    ), 
RNB_ECOLU   (B7N4A3    ), RNB_ECOSE   (B6IA03    ), RNB_ECOSM   (B1LGE7    ), 
RNB_ECOUT   (Q1RC77    ), RNB_EDWTE   (D0Z8E6    ), RNB_ENT38   (A4WAX5    ), 
RNB_ERWT9   (B2VKS8    ), RNB_ESCF3   (B7LRZ1    ), RNB_HAEDU   (Q7VLX8    ), 
RNB_HAEI8   (Q4QJL5    ), RNB_HAEIG   (A5UFG3    ), RNB_HAEIN   (P44440    ), 
RNB_KLEP3   (B5XS03    ), RNB_KLEP7   (A6T7Z4    ), RNB_MANSM   (Q65SI5    ), 
RNB_PASMU   (Q9CP74    ), RNB_PECAS   (Q6D5S7    ), RNB_PECCP   (C6DK05    ), 
RNB_PHOLL   (Q7N4F5    ), RNB_PROMH   (B4EW02    ), RNB_PSYIN   (A1SWZ6    ), 
RNB_SALA4   (B5F571    ), RNB_SALAR   (A9MQ20    ), RNB_SALCH   (Q57NV9    ), 
RNB_SALDC   (B5FU93    ), RNB_SALEP   (B5R490    ), RNB_SALG2   (B5R9Y0    ), 
RNB_SALHS   (B4TJI0    ), RNB_SALNS   (B4T6U4    ), RNB_SALPA   (Q5PCZ6    ), 
RNB_SALPB   (A9MWU8    ), RNB_SALPC   (C0Q3R1    ), RNB_SALPK   (B5BIE3    ), 
RNB_SALSV   (B4TX11    ), RNB_SALTI   (Q8Z7C9    ), RNB_SALTY   (Q8ZP54    ), 
RNB_SERP5   (A8GF49    ), RNB_SHIB3   (B2U0I4    ), RNB_SHIBS   (Q31ZY2    ), 
RNB_SHIDS   (Q32GP4    ), RNB_SHIF8   (Q0T5B1    ), RNB_SHIFL   (P59107    ), 
RNB_SHISS   (Q3Z135    ), RNB_SODGM   (Q2NST6    ), RNB_VIBC3   (A5F0G1    ), 
RNB_VIBCH   (Q9KLE1    ), RNB_VIBCM   (C3LW69    ), RNB_VIBPA   (Q87IJ9    ), 
RNB_VIBTL   (B7VSB8    ), RNB_VIBVU   (Q8D7K6    ), RNB_VIBVY   (Q7MEL4    ), 
RNB_XENBS   (D3V184    ), RNB_YERE8   (A1JM34    ), RNB_YERP3   (A7FI01    ), 
RNB_YERPA   (Q1C7L1    ), RNB_YERPB   (B2K4J2    ), RNB_YERPE   (Q8ZED8    ), 
RNB_YERPG   (A9R8T9    ), RNB_YERPN   (Q1CIZ7    ), RNB_YERPP   (A4TJ37    ), 
RNB_YERPS   (Q66AH3    ), RNB_YERPY   (B1JKP2    ), RNR1_LACLA  (Q9CH00    ), 
RNR2_LACLA  (Q02146    ), RNR_AQUAE   (O67834    ), RNR_BACSU   (O32231    ), 
RNR_BUCAI   (P57628    ), RNR_BUCAP   (Q8K917    ), RNR_CHLMU   (Q9PK00    ), 
RNR_CHLPN   (Q9Z848    ), RNR_CHLTR   (O84402    ), RNR_ECOLI   (P21499    ), 
RNR_HAEIN   (P44907    ), RNR_HELPJ   (Q9ZJX9    ), RNR_HELPY   (P56123    ), 
RNR_MYCGE   (P47350    ), RNR_MYCPN   (P75529    ), RNR_MYCPU   (Q98QL0    ), 
RNR_SHIFL   (P30851    ), RNR_THEMA   (Q9WZI1    ), RNR_UREPA   (Q9PR88    ), 
RNR_VIBCH   (Q9KNY1    ), RNR_VIBPA   (P40611    ), RP44A_ARATH (Q9SHL7    ), 
RRP44_CAEEL (Q17632    ), RRP44_HUMAN (Q9Y2L1    ), RRP44_MOUSE (Q9CSH3    ), 
RRP44_YEAST (Q08162    ), SSD1_YEAST  (P24276    ), ZAM_SYNY3   (Q46363    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 6 sequences 

RNB_ACTP2   (A3N0B9    ), RNB_ACTP7   (B3GXJ4    ), RNB_ACTPJ   (B0BP37    ), 

RNB_HAEPS   (B8F4C5    ), STS5_SCHPO  (O74454    ), YBU1_SCHPO  (O94525    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

HELZ2_HUMAN (Q9BYK8    )


				
	

	

		PDB
[Detailed view]		
		
			18 PDB
			


			2ID0; 2IX0; 2IX1; 2VNU; 2WP8; 4IFD; 4PMW; 4RO1; 5C0W; 5C0X; 5G06; 5JEA; 
			
				5K36; 5VZJ; 6D6Q; 6D6R; 6FSZ; 6H25
			
			

			» more

				
	





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