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PROSITE entry PS01189


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General information about the entry

Entry name [info] RIBOSOMAL_S12E
Accession [info] PS01189
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2001 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00915

Name and characterization of the entry

Description [info] Ribosomal protein S12e signature.
Pattern [info] 
[SA]-[LI]-[KREQP]-x(2)-[LIVM]-x(2)-[SA]-x(3)-[DNG]-G-[LIV]-x(2)-G-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 23 in 23 different sequences
Number of true positive hits 21 in 21 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 91.30 %
Recall (true positives / (true positives + false negatives)) 95.45 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 21 sequences 

RS121_ARATH (Q9S9P1), RS122_ARATH (Q9SKZ3), RS12A_SCHPO (O14062), 

RS12B_SCHPO (O74322), RS12_BLUHO  (O59936), RS12_BOVIN  (Q76I81), 
RS12_CAEEL  (P49196), RS12_CANAL  (Q5ADQ6), RS12_CHICK  (P84175), 
RS12_CYAPA  (Q9SMI3), RS12_DROME  (P80455), RS12_HORVU  (Q9XHS0), 
RS12_HUMAN  (P25398), RS12_MOUSE  (P63323), RS12_ORENI  (O13019), 
RS12_PIG(P46405), RS12_PLAF7  (O97249), RS12_RAT(P63324), 
RS12_TRYBB  (Q03253), RS12_XENLA  (P47840), RS12_YEAST  (P48589)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

RS12_DICDI  (Q54PX9)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			2 sequences
			


			
PLEK2_HUMAN (Q9NYT0), PLEK2_MOUSE (Q9WV52)


				
	

	

		PDB
[Detailed view]		
		
			189 PDB
			


			3J6X; 3J6Y; 3J77; 3J78; 3J7A; 3J7R; 3JBN; 3JBO; 3JBP; 4U3M; 4U3N; 4U3U; 
			
				4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 
				4U56; 4U6F; 4V6W; 4V6X; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 
				5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 
				5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 5T2C; 
				5TBW; 5TGA; 5TGM; 5VYC; 5WYJ; 6EML; 6FAI; 6FEC; 6G18; 6G51; 6G53; 6G5H; 
				6G5I; 6GQ1; 6GQB; 6GQV; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6KE6; 6LQP; 6LQU; 
				6OKK; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QZP; 6RBD; 6RBE; 
				6S47; 6SNT; 6SV4; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TNU; 6WDR; 6WOO; 6XA1; 
				6XU6; 6XU7; 6XU8; 6Y0G; 6Y57; 6Y7C; 6YBS; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 
				6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOL; 6ZON; 
				6ZP4; 6ZU9; 6ZUO; 6ZV6; 6ZVH; 6ZVI; 6ZVJ; 6ZXD; 6ZXE; 6ZXF; 6ZXG; 6ZXH; 
				7A09; 7A1G; 7B7D; 7D5S; 7K5I; 7LS1; 7LS2; 7MPI; 7MPJ; 7MQ8; 7MQ9; 7MQA; 
				7N8B; 7NRC; 7NRD; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QGG; 7QP6; 7QP7; 7R4X; 
				7TQL; 7WTT; 7WTU; 7WTV; 7WTW; 7WTX; 7WTZ; 7WU0; 7XNX; 7XNY; 7ZUX; 7ZW0; 
				8BQX; 8CAH; 8CAS; 8CBJ; 8G5Y; 8G60; 8G61; 8G6J; 8GLP
			
			

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