PROSITE logo

PROSITE entry PS01189


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_S12E
Accession [info] PS01189
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2001 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00915

Name and characterization of the entry

Description [info] Ribosomal protein S12e signature.
Pattern [info]
[SA]-[LI]-[KREQP]-x(2)-[LIVM]-x(2)-[SA]-x(3)-[DNG]-G-[LIV]-x(2)-G-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 24 in 24 different sequences
Number of true positive hits 22 in 22 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 91.67 %
Recall (true positives / (true positives + false negatives)) 95.65 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
22 sequences

RS121_ARATH (Q9S9P1), RS122_ARATH (Q9SKZ3), RS12A_SCHPO (O14062), 
RS12B_SCHPO (O74322), RS12_BLUHO  (O59936), RS12_BOVIN  (Q76I81), 
RS12_CAEEL  (P49196), RS12_CANAL  (Q5ADQ6), RS12_CHICK  (P84175), 
RS12_CYAPA  (Q9SMI3), RS12_DROME  (P80455), RS12_HORVU  (Q9XHS0), 
RS12_HUMAN  (P25398), RS12_MOUSE  (P63323), RS12_ORENI  (O13019), 
RS12_PIG(P46405), RS12_PLAF7  (O97249), RS12_RABIT  (G1SFR8), 
RS12_RAT(P63324), RS12_TRYBB  (Q03253), RS12_XENLA  (P47840), 
RS12_YEAST  (P48589)
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

RS12_DICDI  (Q54PX9)

		
UniProtKB/Swiss-Prot
False positive sequences
2 sequences

PLEK2_HUMAN (Q9NYT0), PLEK2_MOUSE (Q9WV52)

		
PDB
[Detailed view]
283 PDB

3J6X; 3J6Y; 3J77; 3J78; 3J7A; 3J7R; 3JAG; 3JAH; 3JAI; 3JBN; 3JBO; 3JBP; 4D5L; 4D61; 4KZX; 4KZY; 4KZZ; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4V6W; 4V6X; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5K0Y; 5LKS; 5LYB; 5LZS; 5LZT; 5LZU; 5LZV; 5LZW; 5LZX; 5LZY; 5LZZ; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 5T2C; 5TBW; 5TGA; 5TGM; 5VYC; 5WYJ; 6D90; 6D9J; 6EML; 6FAI; 6FEC; 6G18; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6GZ3; 6HCF; 6HCJ; 6HCM; 6HCQ; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6KE6; 6LQP; 6LQU; 6MTB; 6MTC; 6MTD; 6MTE; 6OKK; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6P4G; 6P4H; 6P5I; 6P5J; 6P5K; 6P5N; 6Q8Y; 6QZP; 6R5Q; 6R6G; 6R6P; 6R7Q; 6RBD; 6RBE; 6S47; 6SGC; 6SNT; 6SV4; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TNU; 6W2S; 6W2T; 6WDR; 6WOO; 6XA1; 6XU6; 6XU7; 6XU8; 6Y0G; 6Y57; 6Y7C; 6YAL; 6YAM; 6YAN; 6YBS; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOL; 6ZON; 6ZP4; 6ZU9; 6ZUO; 6ZV6; 6ZVH; 6ZVI; 6ZVJ; 6ZVK; 6ZXD; 6ZXE; 6ZXF; 6ZXG; 6ZXH; 7A01; 7A09; 7A1G; 7B7D; 7D5S; 7JQB; 7JQC; 7K5I; 7LS1; 7LS2; 7MDZ; 7MPI; 7MPJ; 7MQ8; 7MQ9; 7MQA; 7N8B; 7NRC; 7NRD; 7NWG; 7NWH; 7NWI; 7O7Y; 7O7Z; 7O80; 7O81; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QGG; 7QP6; 7QP7; 7R4X; 7SYG; 7SYH; 7SYI; 7SYJ; 7SYK; 7SYL; 7SYM; 7SYN; 7SYO; 7SYP; 7SYQ; 7SYR; 7SYS; 7SYT; 7SYU; 7SYV; 7SYW; 7SYX; 7TOQ; 7TOR; 7TQL; 7WTT; 7WTU; 7WTV; 7WTW; 7WTX; 7WTZ; 7WU0; 7XNX; 7XNY; 7ZJW; 7ZJX; 7ZPQ; 7ZRS; 7ZUW; 7ZUX; 7ZW0; 8BHF; 8BQD; 8BQX; 8BTK; 8CAH; 8CAS; 8CBJ; 8G5Y; 8G60; 8G61; 8G6J; 8GLP; 8IFD; 8IFE; 8OVA; 8OZ0; 8P2K; 8PPK; 8PPL; 8SCB; 8T4S; 8Y0U
» more