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Entry: PS01189

General information about the entry

Entry name [info] RIBOSOMAL_S12E
Accession [info] PS01189
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2001 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00915

Name and characterization of the entry

Description [info] Ribosomal protein S12e signature.
Pattern [info]
[SA]-[LI]-[KREQP]-x(2)-[LIVM]-x(2)-[SA]-x(3)-[DNG]-G-[LIV]-x(2)-G-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 22 in 22 different sequences
Number of true positive hits 20 in 20 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 90.91 %
Recall (true positives / (true positives + false negatives)) 95.24 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
20 sequences

RS121_ARATH (Q9S9P1    ), RS122_ARATH (Q9SKZ3    ), RS12A_SCHPO (O14062    ), 
RS12B_SCHPO (O74322    ), RS12_BLUGH  (O59936    ), RS12_BOVIN  (Q76I81    ), 
RS12_CAEEL  (P49196    ), RS12_CHICK  (P84175    ), RS12_CYAPA  (Q9SMI3    ), 
RS12_DROME  (P80455    ), RS12_HORVU  (Q9XHS0    ), RS12_HUMAN  (P25398    ), 
RS12_MOUSE  (P63323    ), RS12_ORENI  (O13019    ), RS12_PIG    (P46405    ), 
RS12_PLAF7  (O97249    ), RS12_RAT    (P63324    ), RS12_TRYBB  (Q03253    ), 
RS12_XENLA  (P47840    ), RS12_YEAST  (P48589    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

RS12_DICDI  (Q54PX9    )

		
UniProtKB/Swiss-Prot
False positive sequences
2 sequences

PLEK2_HUMAN (Q9NYT0    ), PLEK2_MOUSE (Q9WV52    )

		
PDB
[Detailed view]
105 PDB

3J6X; 3J6Y; 3J77; 3J78; 3J7A; 3J7R; 3JBN; 3JBO; 3JBP; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4V6W; 4V6X; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 5T2C; 5TBW; 5TGA; 5TGM; 5VYC; 5WYJ; 6EK0; 6EML; 6FAI; 6FEC; 6G18; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6OKK; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QZP; 6RBD; 6RBE; 6S47; 6SNT; 6SV4; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TNU; 6Y0G; 6Y57; 6Y7C
» more

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