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PROSITE entry PS01200


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General information about the entry

Entry name [info] TUB_1
Accession [info] PS01200
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2001 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00923

Name and characterization of the entry

Description [info] Tub family signature 1.
Pattern [info] 
F-[KRHQ]-G-R-V-[ST]-x-A-S-V-K-N-F-Q.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 48 in 48 different sequences
Number of true positive hits 48 in 48 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.12 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 48 sequences 

TLP10_ARATH (Q9FRH7), TLP10_ORYSJ (Q688Y7), TLP11_ARATH (Q6NPQ1), 

TLP11_ORYSJ (Q8H485), TLP12_ORYSJ (Q69U54), TLP13_ORYSJ (Q53PP5), 
TLP14_ORYSJ (Q2QXB2), TLP1_ARATH  (Q9ZP59), TLP1_ORYSJ  (Q5QM27), 
TLP2_ARATH  (Q8GVE5), TLP3_ORYSJ  (Q8LJA9), TLP5_ARATH  (Q944S3), 
TLP5_ORYSJ  (Q6Z2G9), TLP6_ARATH  (Q0WPY0), TLP6_ORYSJ  (Q10LG8), 
TLP7_ARATH  (Q93VI8), TLP7_ORYSJ  (Q7XSV4), TLP8_ORYSJ  (Q75HX5), 
TLP9_ARATH  (Q9SQU1), TLP9_ORYSJ  (Q68Y48), TUB1_CAEBR  (A8WN62), 
TUB1_CAEEL  (Q09306), TUB_HUMAN   (P50607), TUB_MOUSE   (P50586), 
TUB_RAT (O88808), TULP1_AEDAE (Q16KI5), TULP1_CULQU (B0XFQ9), 
TULP1_HUMAN (O00294), TULP1_MOUSE (Q9Z273), TULP2_AEDAE (Q16IR1), 
TULP2_CULQU (B0WI30), TULP2_HUMAN (O00295), TULP2_MOUSE (P46686), 
TULP3_HUMAN (O75386), TULP3_MOUSE (O88413), TULP_ANOGA  (Q7PZK5), 
TULP_DROAN  (B3MDU3), TULP_DROER  (B3NJY0), TULP_DROGR  (B4J6R7), 
TULP_DROME  (Q86PC9), TULP_DROMO  (B4KNA9), TULP_DROPE  (B4H4X0), 
TULP_DROPS  (Q28X18), TULP_DROSE  (B4I7J9), TULP_DROSI  (B4QFM2), 
TULP_DROVI  (B4LMR9), TULP_DROWI  (B4MKC7), TULP_DROYA  (B4P9H8)
» more

UniProtKB/Swiss-Prot
False negative sequences		 3 sequences 

TLP2_ORYSJ  (Q94DT9), TLP3_ARATH  (Q8VY21), TLP4_ORYSJ  (Q6ETL2)


				
	

	

		PDB
[Detailed view]		
		
			6 PDB
			


			1C8Z; 1I7E; 1S31; 2FIM; 3C5N; 8FH3