PROSITE entry PS01201
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General information about the entry
| Entry name [info] | TUB_2 |
| Accession [info] | PS01201 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00923 |
Name and characterization of the entry
| Description [info] | Tub family signature 2. |
| Pattern [info] |
A-F-[AG]-I-[GSAC]-[LIVM]-[ST]-S-F-x-[GST]-K-x-A-C-E. |
Numerical results [info]
| Total number of hits | 41 in 41 different sequences |
| Number of true positive hits | 41 in 41 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 10 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 80.39 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
41 sequences
TLP10_ARATH (Q9FRH7), TLP10_ORYSJ (Q688Y7), TLP11_ORYSJ (Q8H485), TLP12_ORYSJ (Q69U54), TLP13_ORYSJ (Q53PP5), TLP14_ORYSJ (Q2QXB2), TLP1_ARATH (Q9ZP59), TLP1_ORYSJ (Q5QM27), TLP2_ARATH (Q8GVE5), TLP3_ORYSJ (Q8LJA9), TLP5_ORYSJ (Q6Z2G9), TLP7_ARATH (Q93VI8), TLP7_ORYSJ (Q7XSV4), TLP8_ORYSJ (Q75HX5), TLP9_ORYSJ (Q68Y48), TUB1_CAEBR (A8WN62), TUB1_CAEEL (Q09306), TUB_HUMAN (P50607), TUB_MOUSE (P50586), TUB_RAT (O88808), TULP1_AEDAE (Q16KI5), TULP1_CULQU (B0XFQ9), TULP1_HUMAN (O00294), TULP1_MOUSE (Q9Z273), TULP2_AEDAE (Q16IR1), TULP2_CULQU (B0WI30), TULP3_HUMAN (O75386), TULP3_MOUSE (O88413), TULP_ANOGA (Q7PZK5), TULP_DROAN (B3MDU3), TULP_DROER (B3NJY0), TULP_DROGR (B4J6R7), TULP_DROME (Q86PC9), TULP_DROMO (B4KNA9), TULP_DROPE (B4H4X0), TULP_DROPS (Q28X18), TULP_DROSE (B4I7J9), TULP_DROSI (B4QFM2), TULP_DROVI (B4LMR9), TULP_DROWI (B4MKC7), TULP_DROYA (B4P9H8)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
10 sequences
TLP11_ARATH (Q6NPQ1), TLP2_ORYSJ (Q94DT9), TLP3_ARATH (Q8VY21), TLP4_ORYSJ (Q6ETL2), TLP5_ARATH (Q944S3), TLP6_ARATH (Q0WPY0), TLP6_ORYSJ (Q10LG8), TLP9_ARATH (Q9SQU1), TULP2_HUMAN (O00295), TULP2_MOUSE (P46686)» more |
| PDB [Detailed view] |
5 PDB
1C8Z; 1I7E; 1S31; 2FIM; 8FH3 |