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PROSITE entry PS01201


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General information about the entry

Entry name [info] TUB_2
Accession [info] PS01201
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2001 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00923

Name and characterization of the entry

Description [info] Tub family signature 2.
Pattern [info] 
A-F-[AG]-I-[GSAC]-[LIVM]-[ST]-S-F-x-[GST]-K-x-A-C-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 41 in 41 different sequences
Number of true positive hits 41 in 41 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 10
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 80.39 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 41 sequences 

TLP10_ARATH (Q9FRH7), TLP10_ORYSJ (Q688Y7), TLP11_ORYSJ (Q8H485), 

TLP12_ORYSJ (Q69U54), TLP13_ORYSJ (Q53PP5), TLP14_ORYSJ (Q2QXB2), 
TLP1_ARATH  (Q9ZP59), TLP1_ORYSJ  (Q5QM27), TLP2_ARATH  (Q8GVE5), 
TLP3_ORYSJ  (Q8LJA9), TLP5_ORYSJ  (Q6Z2G9), TLP7_ARATH  (Q93VI8), 
TLP7_ORYSJ  (Q7XSV4), TLP8_ORYSJ  (Q75HX5), TLP9_ORYSJ  (Q68Y48), 
TUB1_CAEBR  (A8WN62), TUB1_CAEEL  (Q09306), TUB_HUMAN   (P50607), 
TUB_MOUSE   (P50586), TUB_RAT (O88808), TULP1_AEDAE (Q16KI5), 
TULP1_CULQU (B0XFQ9), TULP1_HUMAN (O00294), TULP1_MOUSE (Q9Z273), 
TULP2_AEDAE (Q16IR1), TULP2_CULQU (B0WI30), TULP3_HUMAN (O75386), 
TULP3_MOUSE (O88413), TULP_ANOGA  (Q7PZK5), TULP_DROAN  (B3MDU3), 
TULP_DROER  (B3NJY0), TULP_DROGR  (B4J6R7), TULP_DROME  (Q86PC9), 
TULP_DROMO  (B4KNA9), TULP_DROPE  (B4H4X0), TULP_DROPS  (Q28X18), 
TULP_DROSE  (B4I7J9), TULP_DROSI  (B4QFM2), TULP_DROVI  (B4LMR9), 
TULP_DROWI  (B4MKC7), TULP_DROYA  (B4P9H8)
» more

UniProtKB/Swiss-Prot
False negative sequences		 10 sequences 

TLP11_ARATH (Q6NPQ1), TLP2_ORYSJ  (Q94DT9), TLP3_ARATH  (Q8VY21), 

TLP4_ORYSJ  (Q6ETL2), TLP5_ARATH  (Q944S3), TLP6_ARATH  (Q0WPY0), 
TLP6_ORYSJ  (Q10LG8), TLP9_ARATH  (Q9SQU1), TULP2_HUMAN (O00295), 
TULP2_MOUSE (P46686)
» more

PDB
[Detailed view]		 5 PDB

1C8Z; 1I7E; 1S31; 2FIM; 8FH3