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PROSITE entry PS01207


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General information about the entry

Entry name [info] GLYPICAN
Accession [info] PS01207
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE;
13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00927

Name and characterization of the entry

Description [info] Glypicans signature.
Pattern [info] 
C-x(2)-C-x-[GS]-[LIVM]-x(4)-P-C-x(2)-[FY]-C-x(2)-[LIVM]-x(2)-G-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.


Total number of hits 20 in 20 different sequences
Number of true positive hits 20 in 20 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.24 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 20 sequences 

GPC1_BOVIN  (G3X745), GPC1_CHICK  (P50593), GPC1_DANRE  (F1QCC6), 

GPC1_HUMAN  (P35052), GPC1_MOUSE  (Q9QZF2), GPC1_RAT(P35053), 
GPC2_HUMAN  (Q8N158), GPC2_MOUSE  (Q8BKV1), GPC2_RAT(P51653), 
GPC3_HUMAN  (P51654), GPC3_MOUSE  (Q8CFZ4), GPC3_PANTR  (A5A6P7), 
GPC3_RAT(P13265), GPC4_HUMAN  (O75487), GPC4_MOUSE  (P51655), 
GPC5_HUMAN  (P78333), GPC5_MOUSE  (Q8CAL5), GPC6_HUMAN  (Q9Y625), 
GPC6_MOUSE  (Q9R087), GPC6_PONAB  (Q5RE54)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

DALY_DROME  (Q24114)


				
	

	

		PDB
[Detailed view]		
		
			11 PDB
			


			4ACR; 4AD7; 4BWE; 4YWT; 6WJL; 7T62; 7ZA1; 7ZA2; 7ZA3; 7ZAV; 7ZAW