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PROSITE entry PS01211


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General information about the entry

Entry name [info] UPF0001
Accession [info] PS01211
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00931

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0001 signature.
Pattern [info] 
[FW]-H-[FM]-[IV]-G-x-[LIV]-Q-x-[NKRQ]-[KN]-x(3)-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 28 in 28 different sequences
Number of true positive hits 28 in 28 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 93.33 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 28 sequences 

PLPHP_AQUAE (O66631), PLPHP_BACSU (O31727), PLPHP_BOVIN (Q3T0G5), 

PLPHP_BUCAI (P57614), PLPHP_BUCAP (Q8K929), PLPHP_CAEEL (P52057), 
PLPHP_CORGL (O24748), PLPHP_DEIRA (Q9RUL6), PLPHP_DICDI (Q1ZXI6), 
PLPHP_ECO57 (P67082), PLPHP_ECOL6 (P67081), PLPHP_ECOLI (P67080), 
PLPHP_HAEIN (P44506), PLPHP_HELPJ (Q9ZKF2), PLPHP_HELPY (O25156), 
PLPHP_HUMAN (O94903), PLPHP_MOUSE (Q9Z2Y8), PLPHP_MYCBO (P67084), 
PLPHP_MYCLE (Q9CCE2), PLPHP_MYCTO (P9WFQ6), PLPHP_MYCTU (P9WFQ7), 
PLPHP_PASMU (Q9CPD5), PLPHP_PONAB (Q5R4Z1), PLPHP_PSEAE (P24562), 
PLPHP_SYNY3 (P52056), PLPHP_VIBAL (P52055), PLPHP_VIBCH (Q9KUQ4), 
PLPHP_YEAST (P38197)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

PLPHP_BUCBP (Q89A48), PLPHP_SCHPO (Q9P6Q1)


				
	

	

		PDB
[Detailed view]		
		
			12 PDB
			


			1B54; 1CT5; 1W8G; 7U9C; 7U9H; 7UAT; 7UAU; 7UAX; 7UB4; 7UB8; 7UBP; 7UBQ