PROSITE logo

PROSITE entry PS01211


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] UPF0001
Accession [info] PS01211
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00931

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0001 signature.
Pattern [info] 
[FW]-H-[FM]-[IV]-G-x-[LIV]-Q-x-[NKRQ]-[KN]-x(3)-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.


Total number of hits 28 in 28 different sequences
Number of true positive hits 28 in 28 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 93.33 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 28 sequences 

PLPHP_AQUAE (O66631), PLPHP_BACSU (O31727), PLPHP_BOVIN (Q3T0G5), 

PLPHP_BUCAI (P57614), PLPHP_BUCAP (Q8K929), PLPHP_CAEEL (P52057), 
PLPHP_CORGL (O24748), PLPHP_DEIRA (Q9RUL6), PLPHP_DICDI (Q1ZXI6), 
PLPHP_ECO57 (P67082), PLPHP_ECOL6 (P67081), PLPHP_ECOLI (P67080), 
PLPHP_HAEIN (P44506), PLPHP_HELPJ (Q9ZKF2), PLPHP_HELPY (O25156), 
PLPHP_HUMAN (O94903), PLPHP_MOUSE (Q9Z2Y8), PLPHP_MYCBO (P67084), 
PLPHP_MYCLE (Q9CCE2), PLPHP_MYCTO (P9WFQ6), PLPHP_MYCTU (P9WFQ7), 
PLPHP_PASMU (Q9CPD5), PLPHP_PONAB (Q5R4Z1), PLPHP_PSEAE (P24562), 
PLPHP_SYNY3 (P52056), PLPHP_VIBAL (P52055), PLPHP_VIBCH (Q9KUQ4), 
PLPHP_YEAST (P38197)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

PLPHP_BUCBP (Q89A48), PLPHP_SCHPO (Q9P6Q1)


				
	

	

		PDB
[Detailed view]		
		
			12 PDB
			


			1B54; 1CT5; 1W8G; 7U9C; 7U9H; 7UAT; 7UAU; 7UAX; 7UB4; 7UB8; 7UBP; 7UBQ