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Entry: PS01213

General information about the entry

Entry name [info] GLOBIN_FAM_2
Accession [info] PS01213
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00933

Name and characterization of the entry

Description [info] Protozoan/cyanobacterial globins signature.
Pattern [info] 
F-[LF]-x(4)-[GE]-G-[PAT]-x(2)-[YW]-x-[GSE]-[KRQAE]-x(1,5)-[LIVM]-x(3)-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 18 in 18 different sequences
Number of true positive hits 18 in 18 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 90.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] heme(?) at position 15
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 18 sequences 

TRHBN_MYCBO (P0A593    ), TRHBN_MYCPA (Q740T9    ), TRHBN_MYCSM (P0A594    ), 

TRHBN_MYCTO (P9WN24    ), TRHBN_MYCTU (P9WN25    ), TRHBN_NOSCO (Q00812    ), 
TRHBN_NOSSN (P52335    ), TRHBN_PARCA (P15160    ), TRHBN_SYNY3 (P73925    ), 
TRHBN_TETPY (P17724    ), TRHBN_TETTH (Q03459    ), TRHBO_BACSU (O31607    ), 
TRHBO_MYCBO (P0A596    ), TRHBO_MYCLE (Q9CC59    ), TRHBO_MYCTO (P9WN22    ), 
TRHBO_MYCTU (P9WN23    ), TRHN1_CHLMO (Q08753    ), TRHN2_CHLMO (P52334    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

GLB3_ARATH  (Q67XG0    ), TRHBP_CAMJE (Q0PB48    )


				
	

	

		PDB
[Detailed view]		
		
			28 PDB
			


			1DLW; 1DLY; 1IDR; 1MWB; 1NGK; 1RTE; 1RTX; 1S56; 1S61; 1S69; 1S6A; 1UVX; 
			
				1UVY; 1UX8; 2GKM; 2GKN; 2GL3; 2GLN; 2HZ1; 2HZ2; 2HZ3; 2QRW; 3AQ5; 3AQ6; 
				3AQ7; 3AQ8; 3AQ9; 5AB8
			
			

			» more

				
	





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