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Entry: PS01218

General information about the entry

Entry name [info] TATC
Accession [info] PS01218
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00936

Name and characterization of the entry

Description [info] TatC family signature.
Pattern [info] 
Y-x(2)-[FL]-[LIVMAFNT]-[LIVMAFT]-x-[LVSI]-x(4)-[GASF]-x(2)-F-[EQ]-
[LIVMFC]-P-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 35 in 35 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 15
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 35 sequences 

TATCD_BACSU (P42252    ), TATCY_BACSU (O05523    ), TATC_AQUAE  (O67305    ), 

TATC_ARATH  (Q9SJV5    ), TATC_AZOCH  (P54085    ), TATC_BACHD  (Q9Z9P4    ), 
TATC_CAMJE  (Q9PHT8    ), TATC_CORK4  (C4LIK6    ), TATC_ECO57  (P69424    ), 
TATC_ECOL6  (Q8FBI6    ), TATC_ECOLI  (P69423    ), TATC_HAEIN  (P44560    ), 
TATC_HALNC  (D0KWI6    ), TATC_HELPJ  (Q9ZM59    ), TATC_HELPY  (O25701    ), 
TATC_KORVE  (Q1IN69    ), TATC_LISIN  (Q92ES8    ), TATC_MAGMM  (A0L833    ), 
TATC_MAIZE  (C4IZX0    ), TATC_MYCBO  (P66896    ), TATC_MYCLE  (P54078    ), 
TATC_MYCTO  (P9WG96    ), TATC_MYCTU  (P9WG97    ), TATC_ORYSJ  (Q9AVE6    ), 
TATC_PEA    (Q94G17    ), TATC_RICPR  (Q9ZCG6    ), TATC_SYNY3  (P54086    ), 
YCF43_CYACA (Q9TLS5    ), YCF43_GRATL (Q6B8S9    ), YCF43_GUITH (O78493    ), 
YCF43_PORPU (P51264    ), YCF43_PYRYE (Q1XDM3    ), YCF43_TRICV (P49538    ), 
YMF16_NEPOL (Q9TC94    ), YMF16_RECAM (O21266    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 15 sequences 

TATCO_HALVD (D4GZD0    ), TATCT_HALVD (D4GZC9    ), TATC_AKKM8  (B2UN92    ), 

TATC_BLASP  (D0J948    ), TATC_CARHZ  (Q3ADS0    ), TATC_CENSY  (A0RW14    ), 
TATC_DEHMV  (D2BJS8    ), TATC_DEIRA  (Q9RW63    ), TATC_DESAH  (C0QD59    ), 
TATC_FRACC  (Q2J9S4    ), TATC_METAR  (Q0W5V8    ), TATC_PELCD  (Q3A8D5    ), 
TATC_RHOCB  (D5AT98    ), TATC_ROTMD  (D2NT99    ), TATC_XYLCX  (D1BTU8    )
» more

PDB
[Detailed view]		 3 PDB

4B4A; 4HTS; 4HTT

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