PROSITE entry PS01229
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS01229 |
| Entry name [info] | COF_2 |
| Accession [info] | PS01229 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00944 |
Name and characterization of the entry
| Description [info] | Hypothetical cof family signature 2. |
| Pattern [info] |
[LIVMFC]-G-D-[GSANQ]-x-N-D-x(3)-[LIMFY]-x(2)-[AV]-x(2)-[GSCP]-x(2)- [LMP]-x(2)-[GAS]. |
Numerical results [info]
| Total number of hits | 142 in 142 different sequences |
| Number of true positive hits | 84 in 84 different sequences |
| Number of 'unknown' hits | 1 |
| Number of false positive hits | 57 in 57 different sequences |
| Number of false negative sequences | 7 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 59.57 % |
| Recall (true positives / (true positives + false negatives)) | 92.31 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
84 sequences
COF_CITK8 (A8AK07), COF_CROS8 (A7MFJ6), COF_ECO24 (A7ZIK4),» more
|
| UniProtKB/Swiss-Prot False negative sequences |
7 sequences
BPPI_STRP6 (Q5XAQ1), Y028_BUCAI (P57140), Y029_BUCAP (Q8KA73),» more |
| UniProtKB/Swiss-Prot 'Unknown' sequences |
1 sequence
SPFA_ASPFU (Q4WYP6) |
| UniProtKB/Swiss-Prot False positive sequences |
57 sequences
AT132_HUMAN (Q9NQ11), AT132_MOUSE (Q9CTG6), ATC4_SCHPO (O14072),» more |
| PDB [Detailed view] |
6 PDB
1NRW; 1RLM; 1RLO; 1RLT; 2HF2; 3GYG |