PROSITE entry PS01239

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PURL: https://purl.expasy.org/prosite/signature/PS01239

Direct ScanProsite submission

General information about the entry

Entry name [info]	DYNEIN_LIGHT_1
Accession [info]	PS01239
Entry type [info]	PATTERN
Date [info]	01-NOV-1997 CREATED; 01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00953

Name and characterization of the entry

Description [info]	Dynein light chain type 1 signature.
Pattern [info]	H-x-[IV]-x-G-[KR]-x-F-[GA]-S-x-V-[ST]-[HY]-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.

Total number of hits	27 in 27 different sequences
Number of true positive hits	27 in 27 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	4
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	87.10 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

27 sequences

DYL1_BOVIN  (P61285), DYL1_CAEEL  (Q22799), DYL1_CANGA  (Q6FUJ0),

DYL1_CHLRE  (Q39580), DYL1_DEBHA  (Q6BZF8), DYL1_DROME  (Q24117), 
DYL1_EMENI  (O94111), DYL1_EREGS  (Q759T0), DYL1_HELCR  (O02414), 
DYL1_HUMAN  (P63167), DYL1_KLULA  (Q6CWX4), DYL1_MACFA  (P61273), 
DYL1_MOUSE  (P63168), DYL1_RABIT  (P63169), DYL1_RAT(P63170), 
DYL1_SCHMA  (Q94758), DYL1_SCHPO  (Q9UR05), DYL1_YEAST  (Q02647), 
DYL2_BOVIN  (Q3MHR3), DYL2_CAEEL  (Q21557), DYL2_CHLRE  (Q39579), 
DYL2_DROME  (O96860), DYL2_HUMAN  (Q96FJ2), DYL2_MOUSE  (Q9D0M5), 
DYL2_RAT(Q78P75), DYL2_SCHMA  (Q94748), DYL_DICDI   (Q86A88)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

4 sequences

DNAL4_BOVIN (Q32KN5), DNAL4_HUMAN (O96015), DNAL4_MOUSE (Q9DCM4),

DNAL4_PIG   (A4F4L4)

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PDB
[Detailed view]

49 PDB

pdb_00001cmi; pdb_00001f3c; pdb_00001f95; pdb_00001f96; pdb_00001pwj; pdb_00001re6; pdb_00001rhw; pdb_00002p2t; pdb_00002pg1; pdb_00002xqq; pdb_00003bri; pdb_00003brl; pdb_00003dvh; pdb_00003dvp; pdb_00003dvt; pdb_00003e2b; pdb_00003fm7; pdb_00003glw; pdb_00003p8m; pdb_00003zke; pdb_00003zkf; pdb_00004d07; pdb_00004ds1; pdb_00004ht6; pdb_00004qh7; pdb_00004qh8; pdb_00005e0l; pdb_00005e0m; pdb_00006gzj; pdb_00006gzl; pdb_00006rlb; pdb_00006sc2; pdb_00007cnu; pdb_00007d35; pdb_00007jtk; pdb_00007jts; pdb_00007ju4; pdb_00007k3j; pdb_00007k3k; pdb_00007k3l; pdb_00007kzm; pdb_00007kzn; pdb_00007n9f; pdb_00007y8w; pdb_00008glv; pdb_00008pr0; pdb_00008pr1; pdb_00008ptk; pdb_00008rgg
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