PROSITE entry PS01239

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General information about the entry

Entry name [info]	DYNEIN_LIGHT_1
Accession [info]	PS01239
Entry type [info]	PATTERN
Date [info]	01-NOV-1997 CREATED; 01-DEC-2001 DATA UPDATE; 27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00953

Name and characterization of the entry

Description [info]	Dynein light chain type 1 signature.
Pattern [info]	H-x-[IV]-x-G-[KR]-x-F-[GA]-S-x-V-[ST]-[HY]-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.

Total number of hits	27 in 27 different sequences
Number of true positive hits	27 in 27 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	4
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	87.10 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

27 sequences

DYL1_BOVIN  (P61285), DYL1_CAEEL  (Q22799), DYL1_CANGA  (Q6FUJ0),

DYL1_CHLRE  (Q39580), DYL1_DEBHA  (Q6BZF8), DYL1_DROME  (Q24117), 
DYL1_EMENI  (O94111), DYL1_EREGS  (Q759T0), DYL1_HELCR  (O02414), 
DYL1_HUMAN  (P63167), DYL1_KLULA  (Q6CWX4), DYL1_MACFA  (P61273), 
DYL1_MOUSE  (P63168), DYL1_RABIT  (P63169), DYL1_RAT(P63170), 
DYL1_SCHMA  (Q94758), DYL1_SCHPO  (Q9UR05), DYL1_YEAST  (Q02647), 
DYL2_BOVIN  (Q3MHR3), DYL2_CAEEL  (Q21557), DYL2_CHLRE  (Q39579), 
DYL2_DROME  (O96860), DYL2_HUMAN  (Q96FJ2), DYL2_MOUSE  (Q9D0M5), 
DYL2_RAT(Q78P75), DYL2_SCHMA  (Q94748), DYL_DICDI   (Q86A88)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

4 sequences

DNAL4_BOVIN (Q32KN5), DNAL4_HUMAN (O96015), DNAL4_MOUSE (Q9DCM4),

DNAL4_PIG   (A4F4L4)

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PDB
[Detailed view]

45 PDB

1CMI; 1F3C; 1F95; 1F96; 1PWJ; 1RE6; 1RHW; 2P2T; 2PG1; 2XQQ; 3BRI; 3BRL; 3DVH; 3DVP; 3DVT; 3E2B; 3FM7; 3GLW; 3P8M; 3ZKE; 3ZKF; 4D07; 4DS1; 4HT6; 4QH7; 4QH8; 5E0L; 5E0M; 6GZJ; 6GZL; 6RLB; 6SC2; 7CNU; 7D35; 7JTK; 7JTS; 7JU4; 7K3J; 7K3K; 7K3L; 7KZM; 7KZN; 7N9F; 7Y8W; 8GLV
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