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PROSITE entry PS01246


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General information about the entry

Entry name [info] UPF0003
Accession [info] PS01246
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00959

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0003 signature.
Pattern [info] 
G-[STIF]-V-x(2)-[LIVM]-x(6)-[LIVMF]-x(3)-[DQT]-x(3)-[LIVH]-x-[LIV]-P-
[NW]-x(2)-[LIVMF]-[LIVFSTA]-x(5)-[NV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.


Total number of hits 21 in 21 different sequences
Number of true positive hits 21 in 21 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.45 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 21 sequences 

MSCK_ECOLI  (P77338), MSCM_ECOLI  (P39285), MSCS_ECO57  (P0C0S2), 

MSCS_ECOLI  (P0C0S1), MSCS_EDWI9  (O52401), MSCS_SHIFL  (P0C0S3), 
MSMJL_METJA (Q58543), MSMJS_METJA (Q57634), Y1546_ARCFU (O28726), 
Y195A_HAEIN (Q57362), Y402_BUCBP  (Q89AB5), Y415_HELPJ  (Q9ZKG7), 
Y415_HELPY  (O25170), Y437_BUCAP  (Q8K9B1), Y452_BUCAI  (P57527), 
Y639_SYNY3  (Q55717), Y812_AQUAE  (O66994), YBIO_ECOLI  (P75783), 
YHDY_BACSU  (O07594), YNAI_ECO57  (P0AEB6), YNAI_ECOLI  (P0AEB5)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

MSCS_WIGBR  (P0DKS1)


				
	

	

		PDB
[Detailed view]		
		
			27 PDB
			


			2OAU; 2VV5; 4AGE; 4AGF; 4HWA; 5AJI; 5Y4O; 6PWN; 6PWO; 6PWP; 6RLD; 6URT; 
			
				6UZH; 6VYK; 6VYL; 6VYM; 6ZYD; 6ZYE; 7A46; 7N4T; 7ONL; 7OO0; 7OO6; 7RAZ; 
				7UW5; 7UX1; 8DDJ
			
			

			» more