PROSITE entry PS01246
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General information about the entry
Entry name [info] | UPF0003 |
Accession [info] | PS01246 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00959 |
Name and characterization of the entry
Description [info] | Uncharacterized protein family UPF0003 signature. |
Pattern [info] |
G-[STIF]-V-x(2)-[LIVM]-x(6)-[LIVMF]-x(3)-[DQT]-x(3)-[LIVH]-x-[LIV]-P- [NW]-x(2)-[LIVMF]-[LIVFSTA]-x(5)-[NV]. |
Numerical results [info]
Total number of hits | 21 in 21 different sequences |
Number of true positive hits | 21 in 21 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 1 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 95.45 % |
Comments [info]
Taxonomic range [info] | Archaea, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
21 sequences
MSCK_ECOLI (P77338), MSCM_ECOLI (P39285), MSCS_ECO57 (P0C0S2), MSCS_ECOLI (P0C0S1), MSCS_EDWI9 (O52401), MSCS_SHIFL (P0C0S3), MSMJL_METJA (Q58543), MSMJS_METJA (Q57634), Y1546_ARCFU (O28726), Y195A_HAEIN (Q57362), Y402_BUCBP (Q89AB5), Y415_HELPJ (Q9ZKG7), Y415_HELPY (O25170), Y437_BUCAP (Q8K9B1), Y452_BUCAI (P57527), Y639_SYNY3 (Q55717), Y812_AQUAE (O66994), YBIO_ECOLI (P75783), YHDY_BACSU (O07594), YNAI_ECO57 (P0AEB6), YNAI_ECOLI (P0AEB5)» more
|
UniProtKB/Swiss-Prot False negative sequences |
1 sequence
MSCS_WIGBR (P0DKS1) |
PDB [Detailed view] |
27 PDB
2OAU; 2VV5; 4AGE; 4AGF; 4HWA; 5AJI; 5Y4O; 6PWN; 6PWO; 6PWP; 6RLD; 6URT; 6UZH; 6VYK; 6VYL; 6VYM; 6ZYD; 6ZYE; 7A46; 7N4T; 7ONL; 7OO0; 7OO6; 7RAZ; 7UW5; 7UX1; 8DDJ » more |