 |
|
| Entry: PS01246 |
General information about the entry
| Entry name [info] | UPF0003 |
| Accession [info] | PS01246 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE; 02-JUN-2021 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00959 |
Name and characterization of the entry
| Description [info] | Uncharacterized protein family UPF0003 signature. |
| Pattern [info] |
G-[STIF]-V-x(2)-[LIVM]-x(6)-[LIVMF]-x(3)-[DQT]-x(3)-[LIVH]-x-[LIV]-P- [NW]-x(2)-[LIVMF]-[LIVFSTA]-x(5)-[NV]. |
Numerical results [info]
| Total number of hits | 21 in 21 different sequences |
| Number of true positive hits | 21 in 21 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 95.45 % |
Comments [info]
| Taxonomic range [info] | Archaea, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
21 sequences
MSCK_ECOLI (P77338 ), MSCM_ECOLI (P39285 ), MSCS_ECO57 (P0C0S2 ), MSCS_ECOLI (P0C0S1 ), MSCS_EDWI9 (O52401 ), MSCS_SHIFL (P0C0S3 ), MSMJL_METJA (Q58543 ), MSMJS_METJA (Q57634 ), Y1546_ARCFU (O28726 ), Y195A_HAEIN (Q57362 ), Y402_BUCBP (Q89AB5 ), Y415_HELPJ (Q9ZKG7 ), Y415_HELPY (O25170 ), Y437_BUCAP (Q8K9B1 ), Y452_BUCAI (P57527 ), Y639_SYNY3 (Q55717 ), Y812_AQUAE (O66994 ), YBIO_ECOLI (P75783 ), YHDY_BACSU (O07594 ), YNAI_ECO57 (P0AEB6 ), YNAI_ECOLI (P0AEB5 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
MSCS_WIGBR (P0DKS1 ) |
| PDB [Detailed view] |
14 PDB
2OAU; 2VV5; 4AGE; 4AGF; 4HWA; 5AJI; 6PWN; 6PWO; 6PWP; 6RLD; 6URT; 6UZH; 6ZYD; 6ZYE » more |
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission