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Entry: PS01256

General information about the entry

Entry name [info] CULLIN_1
Accession [info] PS01256
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE;
11-DEC-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00967

Name and characterization of the entry

Description [info] Cullin family signature.
Pattern [info] 
[LIV]-[KL]-x(2)-[LIVM]-x(2)-L-[IL]-[DEQGVT]-[KRHNQ]-x-[YT]-[LIVM]-x-R-
x(5,7)-[FYLV]-x-Y-x-[SAT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_11 which contains 561'568 sequence entries.


Total number of hits 43 in 43 different sequences
Number of true positive hits 43 in 43 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 23
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 65.15 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 43 sequences 

CDC53_YEAST (Q12018    ), CUL1_ARATH  (Q94AH6    ), CUL1_CAEEL  (Q17389    ), 

CUL1_DICDI  (O60999    ), CUL1_DROME  (Q24311    ), CUL1_HUMAN  (Q13616    ), 
CUL1_MOUSE  (Q9WTX6    ), CUL1_ORYSJ  (Q5ZC88    ), CUL1_PONAB  (Q5R4G6    ), 
CUL1_SCHPO  (O13790    ), CUL2_CAEEL  (Q17390    ), CUL2_DICDI  (Q9XZJ3    ), 
CUL2_HUMAN  (Q13617    ), CUL2_MOUSE  (Q9D4H8    ), CUL2_PONAB  (Q5RCF3    ), 
CUL3A_XENLA (Q6DE95    ), CUL3B_XENLA (Q6GPF3    ), CUL3_CAEEL  (Q17391    ), 
CUL3_DICDI  (Q54NZ5    ), CUL3_HUMAN  (Q13618    ), CUL3_MOUSE  (Q9JLV5    ), 
CUL3_RAT    (B5DF89    ), CUL3_SCHPO  (Q09760    ), CUL3_XENTR  (A4IHP4    ), 
CUL3_YEAST  (P53202    ), CUL4A_HUMAN (Q13619    ), CUL4A_MOUSE (Q3TCH7    ), 
CUL4B_HUMAN (Q13620    ), CUL4B_MOUSE (A2A432    ), CUL4_ARATH  (Q8LGH4    ), 
CUL4_CAEEL  (Q17392    ), CUL4_DICDI  (Q54CS2    ), CUL4_SCHPO  (O14122    ), 
CUL5_CAEEL  (Q23639    ), CUL5_HUMAN  (Q93034    ), CUL5_MOUSE  (Q9D5V5    ), 
CUL5_PONAB  (Q5RB36    ), CUL5_RABIT  (Q29425    ), CUL5_RAT    (Q9JJ31    ), 
CUL6_CAEEL  (Q21346    ), CUL7_MOUSE  (Q8VE73    ), CUL9_HUMAN  (Q8IWT3    ), 
CUL9_MOUSE  (Q80TT8    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 23 sequences 

ANC2_CAEEL  (P34514    ), ANC2_HUMAN  (Q9UJX6    ), APC2_ARATH  (Q8H1U5    ), 

APC2_DICDI  (Q551S9    ), APC2_SCHPO  (Q874R3    ), APC2_YEAST  (Q12440    ), 
CACL1_HUMAN (Q86Y37    ), CACL1_MOUSE (Q8R0X2    ), CACL1_RAT   (Q5XI53    ), 
CLL1_ARATH  (P0CH31    ), CLL2_ARATH  (Q9XIE9    ), CLL3_ARATH  (Q9XIE8    ), 
CLL4_ARATH  (Q9STG3    ), CLL5_ARATH  (Q9SZ75    ), CUL2_ARATH  (Q9SRZ0    ), 
CUL3A_ARATH (Q9ZVH4    ), CUL3B_ARATH (Q9C9L0    ), CUL5_DICDI  (Q54XF7    ), 
CUL7_HUMAN  (Q14999    ), CUL7_PONAB  (Q5RCJ3    ), CUL7_RAT    (D3ZEF4    ), 
CUL8_YEAST  (P47050    ), YR337_MIMIV (Q5UQT0    )
» more

PDB
[Detailed view]		 23 PDB

1IUY; 1LDJ; 1LDK; 1U6G; 2DO7; 2HYE; 3DPL; 3DQV; 3O2P; 3O6B; 3RTR; 3TDU; 3TDZ; 4A0C; 4A0K; 4A0L; 4P5O; 5N4W; 5V89; 6R6H; 6R7F; 6R7I; 6R7N
» more

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