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PROSITE entry PS01262


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General information about the entry

Entry name [info] IF1A
Accession [info] PS01262
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00970

Name and characterization of the entry

Description [info] Eukaryotic initiation factor 1A signature.
Pattern [info] 
[IMVALH]-x-G-x-[GSDENK]-[KRHFW]-x(4)-[CL]-x-D-G-x(2)-[RY]-x(2)-[RH]-[IL]-
x-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 57 in 57 different sequences
Number of true positive hits 57 in 57 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 57 sequences 

IF1A1_HALSA (Q9HN64), IF1A1_HALWD (Q18EX1), IF1A1_METAC (Q8TSA3), 

IF1A1_METBF (Q469J2), IF1A1_METMA (Q8PVF1), IF1A2_HALSA (Q9HP87), 
IF1A2_HALWD (Q18JF4), IF1A2_METAC (Q8TR33), IF1A2_METBF (Q469I9), 
IF1A2_METMA (Q8PUJ8), IF1A3_METAC (Q8TR31), IF1AX_HUMAN (P47813), 
IF1AX_MOUSE (Q8BMJ3), IF1AX_PONAB (Q5RA42), IF1AY_HUMAN (O14602), 
IF1AY_PANTR (Q6GVM3), IF1A_AERPE  (P57676), IF1A_ARCFU  (O29481), 
IF1A_DICDI  (Q54YJ6), IF1A_HALMA  (Q5UZM2), IF1A_HALS3  (B0R7D8), 
IF1A_META3  (A6UUK8), IF1A_METBU  (Q12YN5), IF1A_METJA  (Q57887), 
IF1A_METKA  (Q8TXZ3), IF1A_METLZ  (A2STQ8), IF1A_METM5  (A4FYM5), 
IF1A_METM6  (A9A6C2), IF1A_METM7  (A6VJQ7), IF1A_METMP  (Q6LZM1), 
IF1A_METS5  (A4YEH8), IF1A_METTH  (O27085), IF1A_MOUSE  (Q60872), 
IF1A_NATPD  (Q3IT14), IF1A_ONOVI  (P56331), IF1A_PICTO  (Q6L2G4), 
IF1A_PYRAB  (Q9V138), IF1A_PYRAE  (Q8ZXV9), IF1A_PYRFU  (Q8U0K5), 
IF1A_PYRHO  (O59280), IF1A_RABIT  (P47814), IF1A_RAT(Q6VV72), 
IF1A_SACS2  (Q97W62), IF1A_SCHPO  (P55877), IF1A_SULAC  (Q4JA54), 
IF1A_SULIA  (C3N0P1), IF1A_SULIK  (C4KK84), IF1A_SULIL  (C3MK60), 
IF1A_SULIM  (C3MU29), IF1A_SULIN  (C3NMA0), IF1A_SULIY  (C3N8M9), 
IF1A_SULTO  (Q974Z9), IF1A_THEAC  (Q03590), IF1A_THEKO  (Q5JH78), 
IF1A_THEVO  (Q979F7), IF1A_WHEAT  (P47815), IF1A_YEAST  (P38912)
» more

UniProtKB/Swiss-Prot
False negative sequences		 3 sequences 

IF1A_DESA1  (B8D5N1), IF1A_METST  (Q2NEP1), YN98_SCHPO  (Q9Y803)


				
	

	

		PDB
[Detailed view]		
		
			40 PDB
			


			1D7Q; 1JT8; 3J80; 3J81; 3JAM; 3JAP; 3WBK; 3ZJY; 4KZY; 4KZZ; 4MNO; 5JB3; 
			
				5JBH; 6FYX; 6FYY; 6GSM; 6GSN; 6SW9; 6SWC; 6SWD; 6SWE; 6YBW; 6ZCE; 6ZMW; 
				6ZP4; 6ZU9; 7A09; 7QP6; 7QP7; 7SYQ; 7SYR; 7SYS; 7SYV; 7SYW; 7SYX; 7TQL; 
				7ZAG; 7ZAH; 7ZAI; 7ZKI
			
			

			» more