PROSITE entry PS01263

View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission

General information about the entry

Entry name [info]	UPF0021
Accession [info]	PS01263
Entry type [info]	PATTERN
Date [info]	01-NOV-1997 CREATED; 01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00971

Name and characterization of the entry

Description [info]	Uncharacterized protein family UPF0021 signature.
Pattern [info]	C-K-x(2)-F-x(4)-E-x(22,23)-S-G-G-K-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.

Total number of hits	33 in 33 different sequences
Number of true positive hits	33 in 33 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	18
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	64.71 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

33 sequences

CTU1_ANOGA  (Q7Q9I4), CTU1_CANAL  (Q5AML2), CTU1_CANGA  (Q6FMB5),

CTU1_DANRE  (Q803X1), CTU1_DEBHA  (B5RV24), CTU1_DICDI  (Q94480), 
CTU1_DROAN  (B3MI77), CTU1_DROER  (B3N7L9), CTU1_DROGR  (B4J5B3), 
CTU1_DROME  (Q7JWW5), CTU1_DROMO  (B4KLL0), CTU1_DROPE  (B4GHY8), 
CTU1_DROPS  (Q28ZC1), CTU1_DROSE  (B4HSL7), CTU1_DROVI  (B4LM02), 
CTU1_DROWI  (B4NN33), CTU1_DROYA  (B4P3W7), CTU1_EREGS  (Q755T1), 
CTU1_KLULA  (Q6CWX6), CTU1_PICGU  (A5DPQ4), CTU1_PICST  (A3GGB3), 
CTU1_SCHPO  (O94282), CTU1_USTMA  (Q4P6R3), CTU1_VANPO  (A7TER7), 
CTU1_XENLA  (Q05AW7), CTU1_XENTR  (Q5FW05), CTU1_YARLI  (Q6C8R5), 
CTU1_YEAS1  (B3LHQ7), CTU1_YEAS7  (A6ZTX8), CTU1_YEAST  (P53088), 
TTUA_METJA  (Q58873), TTUA_THEMA  (Q9WY40), Y1157_METJA (Q58558)

» more

Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

18 sequences

CTU1_AEDAE  (Q16QI1), CTU1_ARATH  (O64862), CTU1_ASPNC  (A2Q879),

CTU1_BOVIN  (Q0VC66), CTU1_CAEBR  (A8WR63), CTU1_CAEEL  (O76365), 
CTU1_CHLRE  (A8JF71), CTU1_CRYNB  (P0CS71), CTU1_CRYNJ  (P0CS70), 
CTU1_HUMAN  (Q7Z7A3), CTU1_LACBS  (B0DK66), CTU1_LODEL  (A5E3Q3), 
CTU1_MALGO  (A8PVM6), CTU1_MOUSE  (Q99J10), CTU1_ORYSJ  (Q6Z6G6), 
CTU1_RAT(B1WBV0), NCSA_HALVD  (D4GSH6), Y485_METJA  (Q57909)

» more