PROSITE entry PS01263

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General information about the entry

Entry name [info]	UPF0021
Accession [info]	PS01263
Entry type [info]	PATTERN
Date [info]	01-NOV-1997 CREATED; 01-NOV-1997 DATA UPDATE; 27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00971

Name and characterization of the entry

Description [info]	Uncharacterized protein family UPF0021 signature.
Pattern [info]	C-K-x(2)-F-x(4)-E-x(22,23)-S-G-G-K-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.

Total number of hits	33 in 33 different sequences
Number of true positive hits	33 in 33 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	18
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	64.71 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

33 sequences

CTU1_ANOGA  (Q7Q9I4), CTU1_CANAL  (Q5AML2), CTU1_CANGA  (Q6FMB5),

CTU1_DANRE  (Q803X1), CTU1_DEBHA  (B5RV24), CTU1_DICDI  (Q94480), 
CTU1_DROAN  (B3MI77), CTU1_DROER  (B3N7L9), CTU1_DROGR  (B4J5B3), 
CTU1_DROME  (Q7JWW5), CTU1_DROMO  (B4KLL0), CTU1_DROPE  (B4GHY8), 
CTU1_DROPS  (Q28ZC1), CTU1_DROSE  (B4HSL7), CTU1_DROVI  (B4LM02), 
CTU1_DROWI  (B4NN33), CTU1_DROYA  (B4P3W7), CTU1_EREGS  (Q755T1), 
CTU1_KLULA  (Q6CWX6), CTU1_PICGU  (A5DPQ4), CTU1_PICST  (A3GGB3), 
CTU1_SCHPO  (O94282), CTU1_USTMA  (Q4P6R3), CTU1_VANPO  (A7TER7), 
CTU1_XENLA  (Q05AW7), CTU1_XENTR  (Q5FW05), CTU1_YARLI  (Q6C8R5), 
CTU1_YEAS1  (B3LHQ7), CTU1_YEAS7  (A6ZTX8), CTU1_YEAST  (P53088), 
TTUA_METJA  (Q58873), TTUA_THEMA  (Q9WY40), Y1157_METJA (Q58558)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
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Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

18 sequences

CTU1_AEDAE  (Q16QI1), CTU1_ARATH  (O64862), CTU1_ASPNC  (A2Q879),

CTU1_BOVIN  (Q0VC66), CTU1_CAEBR  (A8WR63), CTU1_CAEEL  (O76365), 
CTU1_CHLRE  (A8JF71), CTU1_CRYNB  (P0CS71), CTU1_CRYNJ  (P0CS70), 
CTU1_HUMAN  (Q7Z7A3), CTU1_LACBS  (B0DK66), CTU1_LODEL  (A5E3Q3), 
CTU1_MALGO  (A8PVM6), CTU1_MOUSE  (Q99J10), CTU1_ORYSJ  (Q6Z6G6), 
CTU1_RAT(B1WBV0), NCSA_HALVD  (D4GSH6), Y485_METJA  (Q57909)

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