PROSITE entry PS01264
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General information about the entry
| Entry name [info] | TBOX_2 |
| Accession [info] | PS01264 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00972 |
Name and characterization of the entry
| Description [info] | T-box domain signature 2. |
| Pattern [info] |
[LIVMFYWE]-H-[PADHL]-[DENQRS]-[GSE]-x(3)-G-x(2)-[WL]-[ML]-x(3)-[IVA]-x-F. |
Numerical results [info]
| Total number of hits | 93 in 93 different sequences |
| Number of true positive hits | 93 in 93 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 10 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 90.29 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
93 sequences
BRC2_HALRO (O01409 ), BYN_DROME (P55965 ), EOMES_HUMAN (O95936 ), EOMES_MOUSE (O54839 ), EOMES_XENLA (P79944 ), MGAP_HUMAN (Q8IWI9 ), MGAP_MOUSE (A2AWL7 ), OMB_DROME (Q24432 ), TBR1_HUMAN (Q16650 ), TBR1_MOUSE (Q64336 ), TBX10_HUMAN (O75333 ), TBX10_MOUSE (Q810F8 ), TBX11_CAEEL (Q20257 ), TBX12_CAEEL (P90971 ), TBX15_HUMAN (Q96SF7 ), TBX15_MOUSE (O70306 ), TBX18_HUMAN (O95935 ), TBX18_MOUSE (Q9EPZ6 ), TBX19_CANLF (Q5XNS0 ), TBX19_CHICK (P79778 ), TBX19_HUMAN (O60806 ), TBX19_MOUSE (Q99ME7 ), TBX1A_XENLA (Q8AX98 ), TBX1B_XENLA (Q32NI9 ), TBX1_DANRE (Q8AXX2 ), TBX1_HUMAN (O43435 ), TBX1_MOUSE (P70323 ), TBX1_XENTR (Q3SA49 ), TBX20_CHICK (Q8UW76 ), TBX20_DANRE (Q9I9K7 ), TBX20_HUMAN (Q9UMR3 ), TBX20_MOUSE (Q9ES03 ), TBX20_XENLA (Q8AXW8 ), TBX20_XENTR (Q3SA46 ), TBX21_HUMAN (Q9UL17 ), TBX21_MOUSE (Q9JKD8 ), TBX22_HUMAN (Q9Y458 ), TBX22_MOUSE (Q8K402 ), TBX2A_XENLA (Q9IBC8 ), TBX2B_XENLA (Q6PCL0 ), TBX2_CAEEL (Q19691 ), TBX2_CANLF (Q863A2 ), TBX2_DANRE (Q7ZTU9 ), TBX2_HUMAN (Q13207 ), TBX2_MOUSE (Q60707 ), TBX2_XENTR (Q3SA48 ), TBX30_CAEEL (Q9N2K7 ), TBX32_CAEEL (O61764 ), TBX35_CAEEL (Q09376 ), TBX37_CAEEL (Q9U2C9 ), TBX38_CAEEL (Q9XVD5 ), TBX39_CAEEL (Q9NA56 ), TBX3_CHICK (O73718 ), TBX3_HUMAN (O15119 ), TBX3_MOUSE (P70324 ), TBX3_RAT (Q7TST9 ), TBX40_CAEEL (Q9NA55 ), TBX4_CANLF (Q861Q9 ), TBX4_HUMAN (P57082 ), TBX4_MOUSE (P70325 ), TBX5A_DANRE (Q9IAK8 ), TBX5_CHICK (Q9PWE8 ), TBX5_HUMAN (Q99593 ), TBX5_MOUSE (P70326 ), TBX5_RAT (Q5I2P1 ), TBX5_XENLA (Q9W7C2 ), TBX6L_CHICK (P79779 ), TBX6L_DANRE (P79742 ), TBX6_BOVIN (E1BEA8 ), TBX6_GORGO (A1YF56 ), TBX6_HUMAN (O95947 ), TBX6_MOUSE (P70327 ), TBX6_RAT (D3ZJK7 ), TBX6_XENLA (Q8AV66 ), TBX6_XENTR (Q66JL1 ), TBX7_CAEEL (Q95PX3 ), TBX8_CAEEL (Q22292 ), TBX9_CAEEL (Q22289 ), TBXT1_BRAFL (Q17134 ), TBXT2_BRAFL (P80492 ), TBXTA_DANRE (Q07998 ), TBXT_CANLF (Q9GL27 ), TBXT_CHICK (P79777 ), TBXT_HALRO (P56158 ), TBXT_HEMPU (Q25113 ), TBXT_HUMAN (O15178 ), TBXT_MOUSE (P20293 ), TBXT_PATPE (Q9U903 ), TBXT_XENLA (P24781 ), VEGTA_XENLA (P87377 ), VEGTB_XENLA (O13161 ), VEGT_XENBO (Q98UD2 ), VEGT_XENTR (Q28HY0 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
10 sequences
H15_DROME (Q94890 ), TBR1_PATPE (Q9NL40 ), TBX18_CAEEL (O02073 ), TBX1_CAEEL (O17212 ), TBX31_CAEEL (Q9TZL0 ), TBX33_CAEEL (O45291 ), TBX34_CAEEL (Q9NAH2 ), TBX36_CAEEL (Q23622 ), TBX41_CAEEL (Q22813 ), TBX5_XENTR (Q3SA47 )» more |
| PDB [Detailed view] |
61 PDB
1H6F; 1XBR; 2X6U; 2X6V; 4A04; 4S0H; 5BQD; 5FLV; 5QRF; 5QRG; 5QRH; 5QRI; 5QRJ; 5QRK; 5QRL; 5QRM; 5QRN; 5QRO; 5QRP; 5QRQ; 5QRR; 5QRS; 5QRT; 5QRU; 5QRV; 5QRW; 5QRX; 5QRY; 5QRZ; 5QS0; 5QS1; 5QS2; 5QS3; 5QS4; 5QS5; 5QS6; 5QS7; 5QS8; 5QS9; 5QSA; 5QSB; 5QSC; 5QSD; 5QSE; 5QSF; 5QSG; 5QSH; 5QSI; 5QSJ; 5QSK; 5QSL; 5QT0; 5T1J; 6F58; 6F59; 6ZU8; 7ZK2; 7ZKF; 7ZL2; 8A10; 8A7N » more |