PROSITE entry PS01264
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| Entry name [info] | TBOX_2 |
| Accession [info] | PS01264 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00972 |
Name and characterization of the entry
| Description [info] | T-box domain signature 2. |
| Pattern [info] |
[LIVMFYWE]-H-[PADHL]-[DENQRS]-[GSE]-x(3)-G-x(2)-[WL]-[ML]-x(3)-[IVA]-x-F. |
Numerical results [info]
| Total number of hits | 93 in 93 different sequences |
| Number of true positive hits | 93 in 93 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 10 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 90.29 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
93 sequences
BRC2_HALRO (O01409), BYN_DROME (P55965), EOMES_HUMAN (O95936), EOMES_MOUSE (O54839), EOMES_XENLA (P79944), MGAP_HUMAN (Q8IWI9), MGAP_MOUSE (A2AWL7), OMB_DROME (Q24432), TBR1_HUMAN (Q16650), TBR1_MOUSE (Q64336), TBX10_HUMAN (O75333), TBX10_MOUSE (Q810F8), TBX11_CAEEL (Q20257), TBX12_CAEEL (P90971), TBX15_HUMAN (Q96SF7), TBX15_MOUSE (O70306), TBX18_HUMAN (O95935), TBX18_MOUSE (Q9EPZ6), TBX19_CANLF (Q5XNS0), TBX19_CHICK (P79778), TBX19_HUMAN (O60806), TBX19_MOUSE (Q99ME7), TBX1A_XENLA (Q8AX98), TBX1B_XENLA (Q32NI9), TBX1_DANRE (Q8AXX2), TBX1_HUMAN (O43435), TBX1_MOUSE (P70323), TBX1_XENTR (Q3SA49), TBX20_CHICK (Q8UW76), TBX20_DANRE (Q9I9K7), TBX20_HUMAN (Q9UMR3), TBX20_MOUSE (Q9ES03), TBX20_XENLA (Q8AXW8), TBX20_XENTR (Q3SA46), TBX21_HUMAN (Q9UL17), TBX21_MOUSE (Q9JKD8), TBX22_HUMAN (Q9Y458), TBX22_MOUSE (Q8K402), TBX2A_XENLA (Q9IBC8), TBX2B_XENLA (Q6PCL0), TBX2_CAEEL (Q19691), TBX2_CANLF (Q863A2), TBX2_DANRE (Q7ZTU9), TBX2_HUMAN (Q13207), TBX2_MOUSE (Q60707), TBX2_XENTR (Q3SA48), TBX30_CAEEL (Q9N2K7), TBX32_CAEEL (O61764), TBX35_CAEEL (Q09376), TBX37_CAEEL (Q9U2C9), TBX38_CAEEL (Q9XVD5), TBX39_CAEEL (Q9NA56), TBX3_CHICK (O73718), TBX3_HUMAN (O15119), TBX3_MOUSE (P70324), TBX3_RAT(Q7TST9), TBX40_CAEEL (Q9NA55), TBX4_CANLF (Q861Q9), TBX4_HUMAN (P57082), TBX4_MOUSE (P70325), TBX5A_DANRE (Q9IAK8), TBX5_CHICK (Q9PWE8), TBX5_HUMAN (Q99593), TBX5_MOUSE (P70326), TBX5_RAT(Q5I2P1), TBX5_XENLA (Q9W7C2), TBX6L_CHICK (P79779), TBX6L_DANRE (P79742), TBX6_BOVIN (E1BEA8), TBX6_GORGO (A1YF56), TBX6_HUMAN (O95947), TBX6_MOUSE (P70327), TBX6_RAT(D3ZJK7), TBX6_XENLA (Q8AV66), TBX6_XENTR (Q66JL1), TBX7_CAEEL (Q95PX3), TBX8_CAEEL (Q22292), TBX9_CAEEL (Q22289), TBXT1_BRAFL (Q17134), TBXT2_BRAFL (P80492), TBXTA_DANRE (Q07998), TBXT_CANLF (Q9GL27), TBXT_CHICK (P79777), TBXT_HALRO (P56158), TBXT_HEMPU (Q25113), TBXT_HUMAN (O15178), TBXT_MOUSE (P20293), TBXT_PATPE (Q9U903), TBXT_XENLA (P24781), VEGTA_XENLA (P87377), VEGTB_XENLA (O13161), VEGT_XENBO (Q98UD2), VEGT_XENTR (Q28HY0)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
10 sequences
H15_DROME (Q94890), TBR1_PATPE (Q9NL40), TBX18_CAEEL (O02073), TBX1_CAEEL (O17212), TBX31_CAEEL (Q9TZL0), TBX33_CAEEL (O45291), TBX34_CAEEL (Q9NAH2), TBX36_CAEEL (Q23622), TBX41_CAEEL (Q22813), TBX5_XENTR (Q3SA47)» more |
| PDB [Detailed view] |
62 PDB
1H6F; 1XBR; 2X6U; 2X6V; 4A04; 4S0H; 5BQD; 5FLV; 5QRF; 5QRG; 5QRH; 5QRI; 5QRJ; 5QRK; 5QRL; 5QRM; 5QRN; 5QRO; 5QRP; 5QRQ; 5QRR; 5QRS; 5QRT; 5QRU; 5QRV; 5QRW; 5QRX; 5QRY; 5QRZ; 5QS0; 5QS1; 5QS2; 5QS3; 5QS4; 5QS5; 5QS6; 5QS7; 5QS8; 5QS9; 5QSA; 5QSB; 5QSC; 5QSD; 5QSE; 5QSF; 5QSG; 5QSH; 5QSI; 5QSJ; 5QSK; 5QSL; 5QT0; 5T1J; 6F58; 6F59; 6ZU8; 7ZK2; 7ZKF; 7ZL2; 8A10; 8A7N; 8CDN » more |