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| Entry: PS01277 |
General information about the entry
| Entry name [info] | RIBONUCLEASE_PH |
| Accession [info] | PS01277 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE; 12-AUG-2020 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00983 |
Name and characterization of the entry
| Description [info] | Ribonuclease PH signature. |
| Pattern [info] |
[CA]-[DE]-[LIVM](2)-[NQV]-[GTA]-D-[GA]-[SG]-x(2,3)-[TAVLC]-[AT]. |
Numerical results [info]
| Total number of hits | 418 in 418 different sequences |
| Number of true positive hits | 418 in 418 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 8 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 98.12 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
418 sequences
EXOS4_CAEBR (A8WQQ5 ), EXOS4_CAEEL (Q17533 ), RNPH_ACAM1 (B0CAB9 ), RNPH_ACIAD (Q6FFX5 ), RNPH_ACIB3 (B7H2J6 ), RNPH_ACIB5 (B7IBN8 ), RNPH_ACIBC (B2I029 ), RNPH_ACIBS (B0VMP4 ), RNPH_ACIBT (A3M0U3 ), RNPH_ACIBY (B0V5W8 ), RNPH_ACTP2 (A3MYC7 ), RNPH_ACTP7 (B3GZP5 ), RNPH_ACTPJ (B0BRL3 ), RNPH_ACTSZ (A6VLF1 ), RNPH_AGRFC (Q8UIG8 ), RNPH_AGRRK (B9J7T9 ), RNPH_AGRVS (B9JZG3 ), RNPH_ALCBS (Q0VT66 ), RNPH_ALIF1 (Q5E8P0 ), RNPH_ALIFM (B5FFE2 ), RNPH_ALISL (B6EPI9 ), RNPH_ALKEH (Q0A5V1 ), RNPH_ALTMD (B4S201 ), RNPH_ANAD2 (B8J5H5 ), RNPH_ANADE (Q2IEX1 ), RNPH_ANADF (A7HFW3 ), RNPH_ANASK (B4UBI2 ), RNPH_ANOFW (B7GH12 ), RNPH_AQUAE (O67069 ), RNPH_AROAE (Q5P5J6 ), RNPH_AZOC5 (A8HV93 ), RNPH_AZOSB (A1KCM3 ), RNPH_AZOVD (C1DI48 ), RNPH_BACAA (C3PA74 ), RNPH_BACAC (C3L7T5 ), RNPH_BACAN (Q81LA9 ), RNPH_BACC0 (B7JQ74 ), RNPH_BACC1 (Q72ZT1 ), RNPH_BACC2 (B7IIZ1 ), RNPH_BACC3 (C1ETS9 ), RNPH_BACC4 (B7HEB3 ), RNPH_BACC7 (B7HQP4 ), RNPH_BACCN (A7GTG6 ), RNPH_BACCQ (B9IZ73 ), RNPH_BACCR (Q817P3 ), RNPH_BACCZ (Q633V4 ), RNPH_BACHD (Q9K8D8 ), RNPH_BACHK (Q6HD42 ), RNPH_BACLD (Q65GG2 ), RNPH_BACMK (A9VIV4 ), RNPH_BACP2 (A8FFY6 ), RNPH_BACSK (Q5WEM3 ), RNPH_BACSU (P28619 ), RNPH_BACVZ (A7Z7C6 ), RNPH_BDEBA (Q6MJR9 ), RNPH_BEII9 (B2IH14 ), RNPH_BIFLO (Q8G7I0 ), RNPH_BORBR (Q7WI90 ), RNPH_BORPA (Q7W6C1 ), RNPH_BORPE (Q7VXY3 ), RNPH_BRADU (Q89WK4 ), RNPH_BRASB (A5E8I9 ), RNPH_BRASO (A4YJR3 ), RNPH_BREBN (C0ZAF8 ), RNPH_BRUA1 (B2S8G4 ), RNPH_BRUA2 (Q2YP33 ), RNPH_BRUAB (Q57FK3 ), RNPH_BRUC2 (A9M7B8 ), RNPH_BRUMB (C0RGM7 ), RNPH_BRUME (Q8YEV2 ), RNPH_BRUO2 (A5VNA8 ), RNPH_BRUSI (B0CJ32 ), RNPH_BRUSU (Q8G2Y5 ), RNPH_BURA4 (B1YUN3 ), RNPH_BURCA (Q1BY75 ), RNPH_BURCC (B1JXM2 ), RNPH_BURCH (A0K5H3 ), RNPH_BURCJ (B4EBP8 ), RNPH_BURCM (Q0BHF7 ), RNPH_BURL3 (Q39IL4 ), RNPH_BURM1 (A9AEQ7 ), RNPH_BURM7 (A3MML4 ), RNPH_BURM9 (A2S9I2 ), RNPH_BURMA (Q62HZ8 ), RNPH_BURP0 (A3NY37 ), RNPH_BURP6 (A3NC95 ), RNPH_BURPS (Q63RV5 ), RNPH_BURTA (Q2SY74 ), RNPH_BURVG (A4JCC2 ), RNPH_CALBD (B9MQJ8 ), RNPH_CALS4 (Q8RC30 ), RNPH_CALS8 (A4XI64 ), RNPH_CARHZ (Q3AFA0 ), RNPH_CAUSK (B0T369 ), RNPH_CAUVC (P0CAW5 ), RNPH_CAUVN (B8GXP2 ), RNPH_CELJU (B3PGE8 ), RNPH_CHESB (Q11B42 ), RNPH_CHRVO (Q7MBD4 ), RNPH_CITK8 (A8ARN1 ), RNPH_CLOBA (B2UZ31 ), RNPH_CLOBB (B2TJ05 ), RNPH_CLOK1 (B9DWL2 ), RNPH_CLOK5 (A5N2V9 ), RNPH_CLOP1 (Q0TN64 ), RNPH_CLOPE (Q8XI67 ), RNPH_CLOPS (Q0SQU1 ), RNPH_COLP3 (Q48AN3 ), RNPH_CORDI (Q6NFN6 ), RNPH_COREF (Q8FMU8 ), RNPH_CORGB (A4QGQ6 ), RNPH_CORGL (Q8NMR4 ), RNPH_CORK4 (C4LJY5 ), RNPH_COXBN (A9KGR9 ), RNPH_COXBR (A9NB33 ), RNPH_COXBU (Q83EL9 ), RNPH_CROS5 (B1WUL8 ), RNPH_CUPMC (Q1LQ38 ), RNPH_CUPNH (Q0KD27 ), RNPH_CUPTR (B3R3N0 ), RNPH_CUTAK (Q6A759 ), RNPH_CYAP4 (B8HPC6 ), RNPH_DECAR (Q479A2 ), RNPH_DEHM1 (Q3Z6Z8 ), RNPH_DEHMB (A5FQ49 ), RNPH_DEHMC (Q3ZYH8 ), RNPH_DEIRA (Q9RU11 ), RNPH_DESAP (B1I4W9 ), RNPH_DESPS (Q6ANS2 ), RNPH_DESRM (A4J7Y7 ), RNPH_DICNV (A5EV74 ), RNPH_DICTD (B8E0G7 ), RNPH_DINSH (A8LPD1 ), RNPH_ECO24 (A7ZTJ4 ), RNPH_ECO27 (B7UM50 ), RNPH_ECO57 (P66680 ), RNPH_ECO5E (B5YWE1 ), RNPH_ECOBW (P0CG18 ), RNPH_ECOHS (A8A6A5 ), RNPH_ECOK1 (A1AHH4 ), RNPH_ECOL5 (Q0TBG6 ), RNPH_ECOL6 (P66679 ), RNPH_ECOLC (B1IYV7 ), RNPH_ECOLI (P0CG19 ), RNPH_ECOSE (B6I3M0 ), RNPH_ECOSM (B1LK80 ), RNPH_EDWI9 (C5B9C9 ), RNPH_ENT38 (A4W506 ), RNPH_ERWT9 (B2VF76 ), RNPH_ERYLH (Q2NAJ7 ), RNPH_EXIS2 (B1YJW6 ), RNPH_FRAP2 (B0U040 ), RNPH_FRAT1 (Q14HY4 ), RNPH_FRATF (A7NA52 ), RNPH_FRATH (Q2A562 ), RNPH_FRATM (B2SF43 ), RNPH_FRATN (A0Q4X5 ), RNPH_FRATO (Q0BNH8 ), RNPH_FRATT (Q5NGI2 ), RNPH_FRATW (A4IYU1 ), RNPH_GEODF (B9M3E3 ), RNPH_GEOKA (Q5KWI5 ), RNPH_GEOLS (B3E3D2 ), RNPH_GEOMG (Q39UG9 ), RNPH_GEOSL (Q74C79 ), RNPH_GEOSW (C5D5M7 ), RNPH_GEOTN (A4IRI5 ), RNPH_GEOUR (A5G3S1 ), RNPH_HAEDU (Q7VP10 ), RNPH_HAEI8 (Q4QNR6 ), RNPH_HAEIE (A5UAL6 ), RNPH_HAEIG (A5UG91 ), RNPH_HAEIN (P44444 ), RNPH_HAEPS (B8F6D8 ), RNPH_HAES1 (Q0I4U1 ), RNPH_HAHCH (Q2S8P0 ), RNPH_HALHL (A1WVN7 ), RNPH_HAMD5 (C4K3X0 ), RNPH_HISS2 (B0UWM2 ), RNPH_HYDS0 (B4U8T3 ), RNPH_IDILO (Q5QYL5 ), RNPH_KLEP3 (B5XTF9 ), RNPH_KLEP7 (A6TFN5 ), RNPH_LARHH (C1DCK5 ), RNPH_LEGPA (Q5X3P0 ), RNPH_LEGPC (A5IDJ5 ), RNPH_LEGPH (Q5ZTZ6 ), RNPH_LEGPL (Q5WV28 ), RNPH_LEGPN (Q9X528 ), RNPH_LEIXX (Q6AEK9 ), RNPH_LISIN (Q92CH1 ), RNPH_LISMC (C1L2E3 ), RNPH_LISMF (Q720J1 ), RNPH_LISMH (B8DHZ4 ), RNPH_LISMO (Q8Y7N6 ), RNPH_LISW6 (A0AHX9 ), RNPH_MANHA (Q9AES0 ), RNPH_MANSM (Q65W01 ), RNPH_MARHV (A1TY30 ), RNPH_MARMM (Q0AKA6 ), RNPH_MARMS (A6W3H7 ), RNPH_METC4 (B7L092 ), RNPH_METCA (Q602N9 ), RNPH_METEP (A9VZR7 ), RNPH_METFK (Q1GXA4 ), RNPH_METNO (B8IFR7 ), RNPH_METPB (B1ZJ73 ), RNPH_METRJ (B1M4N1 ), RNPH_METS4 (B0UP55 ), RNPH_METSB (B8ERN7 ), RNPH_MOOTA (Q2RL40 ), RNPH_MYCA1 (A0QD04 ), RNPH_MYCA9 (B1MLZ3 ), RNPH_MYCBO (Q7U076 ), RNPH_MYCBP (A1KID0 ), RNPH_MYCBT (C1AMY5 ), RNPH_MYCGI (A4T8F7 ), RNPH_MYCLB (B8ZR59 ), RNPH_MYCLE (P37939 ), RNPH_MYCPA (Q73X87 ), RNPH_MYCS2 (A0R1W8 ), RNPH_MYCSJ (A3Q379 ), RNPH_MYCSK (A1UJV2 ), RNPH_MYCSS (Q1B585 ), RNPH_MYCTA (A5U240 ), RNPH_MYCTO (P9WGZ6 ), RNPH_MYCTU (P9WGZ7 ), RNPH_MYCUA (A0PUG0 ), RNPH_MYCVP (A1TD14 ), RNPH_MYXXD (Q1DAT4 ), RNPH_NEIG1 (Q5F840 ), RNPH_NEIG2 (B4RL28 ), RNPH_NEIM0 (A9M0T5 ), RNPH_NEIMA (Q9JTN2 ), RNPH_NEIMB (Q9JYN5 ), RNPH_NEIMF (A1KUT9 ), RNPH_NITEC (Q0AJ79 ), RNPH_NITEU (Q82XJ4 ), RNPH_NITHX (Q1QRU5 ), RNPH_NITMU (Q2YCZ6 ), RNPH_NITOC (Q3J8F0 ), RNPH_NITWN (Q3SW80 ), RNPH_NOCFA (Q5Z0V1 ), RNPH_NOCSJ (A1SGA2 ), RNPH_NOSP7 (B2J9Q1 ), RNPH_NOSS1 (Q8Z0M2 ), RNPH_OCEIH (Q8EPJ5 ), RNPH_OCHA4 (A6WVA9 ), RNPH_OLICO (B6JCH9 ), RNPH_PARL1 (A7HZ45 ), RNPH_PARP8 (B2JEI0 ), RNPH_PARPJ (B2T6B5 ), RNPH_PARXL (Q13V47 ), RNPH_PASMU (Q9CJW5 ), RNPH_PECAS (Q6DAW2 ), RNPH_PECCP (C6DIC7 ), RNPH_PERMH (C0QTN9 ), RNPH_PHEZH (B4RC87 ), RNPH_PHOLL (Q7MAX2 ), RNPH_PHOPR (Q6LVN8 ), RNPH_PROMH (B4F0W3 ), RNPH_PROMM (Q7V4V8 ), RNPH_PSEA6 (Q15MV7 ), RNPH_PSEA7 (A6VEE1 ), RNPH_PSEA8 (B7V5M5 ), RNPH_PSEAB (Q02E28 ), RNPH_PSEAE (P50597 ), RNPH_PSEF5 (Q4K3R6 ), RNPH_PSEFS (C3K479 ), RNPH_PSEHT (Q3IJI0 ), RNPH_PSEMY (A4Y0L7 ), RNPH_PSEP1 (A5WB10 ), RNPH_PSEPF (Q3K4M0 ), RNPH_PSEPG (B0KQ94 ), RNPH_PSEPK (Q88C89 ), RNPH_PSEPW (B1J4L4 ), RNPH_PSESM (Q88BE0 ), RNPH_PSEU2 (Q4ZZY6 ), RNPH_PSEU5 (A4VGR8 ), RNPH_PSYA2 (Q4FQJ5 ), RNPH_PSYCK (Q1Q8S2 ), RNPH_PSYIN (A1T097 ), RNPH_PSYWF (A5WHJ0 ), RNPH_RALPJ (B2U8D8 ), RNPH_RALSO (Q8XXF5 ), RNPH_RHIE6 (B3PZA2 ), RNPH_RHIEC (Q2KDA1 ), RNPH_RHIL3 (Q1MMD1 ), RNPH_RHILO (Q98DN6 ), RNPH_RHILW (B5ZMW8 ), RNPH_RHIME (Q92SK2 ), RNPH_RHOBA (Q7URE2 ), RNPH_RHOE4 (C1A1V2 ), RNPH_RHOP2 (Q2J324 ), RNPH_RHOPA (Q6NCY8 ), RNPH_RHOPB (Q21CI6 ), RNPH_RHOPS (Q13E56 ), RNPH_RHOPT (B3Q968 ), RNPH_RHORT (Q2RN60 ), RNPH_RHOS1 (A3PNR8 ), RNPH_RHOS5 (A4WVY1 ), RNPH_RHOSK (B9KPU4 ), RNPH_RICAE (C3PP75 ), RNPH_RICAH (A8GPB9 ), RNPH_RICB8 (A8GW25 ), RNPH_RICBR (Q1RIX6 ), RNPH_RICCK (A8EY33 ), RNPH_RICCN (Q92GZ7 ), RNPH_RICFE (Q4UJN4 ), RNPH_RICPR (Q9ZCT5 ), RNPH_RICPU (C4K2U2 ), RNPH_RICRO (B0BUM3 ), RNPH_RICRS (A8GT33 ), RNPH_ROSDO (Q16D02 ), RNPH_RUEPO (Q5LWF6 ), RNPH_RUEST (Q1GCL2 ), RNPH_RUMCH (B8I1A8 ), RNPH_SACD2 (Q21EE1 ), RNPH_SACEN (A4F913 ), RNPH_SALA4 (B5EXE7 ), RNPH_SALAI (A8M4I1 ), RNPH_SALAR (A9MKN2 ), RNPH_SALCH (Q57I99 ), RNPH_SALDC (B5FM66 ), RNPH_SALEP (B5R5G7 ), RNPH_SALG2 (B5RG80 ), RNPH_SALHS (B4T9Y6 ), RNPH_SALNS (B4SXE4 ), RNPH_SALPA (Q5PC25 ), RNPH_SALPK (B5BI17 ), RNPH_SALSV (B4TZY4 ), RNPH_SALTI (P0A2C4 ), RNPH_SALTO (A4X3X5 ), RNPH_SALTY (P0A2C3 ), RNPH_SERP5 (A8GLF0 ), RNPH_SHEAM (A1S2C5 ), RNPH_SHEB2 (B8E4I8 ), RNPH_SHEB5 (A3CZI9 ), RNPH_SHEB8 (A6WI99 ), RNPH_SHEB9 (A9KXZ7 ), RNPH_SHEDO (Q12SG2 ), RNPH_SHEFN (Q07WF3 ), RNPH_SHEHH (B0TQK4 ), RNPH_SHELP (A3QIQ6 ), RNPH_SHEON (Q8E9L4 ), RNPH_SHEPA (A8H9B7 ), RNPH_SHEPC (A4Y2K5 ), RNPH_SHEPW (B8CM22 ), RNPH_SHESA (A0L1S6 ), RNPH_SHESH (A8FQ68 ), RNPH_SHESM (Q0HE49 ), RNPH_SHESR (Q0HZV0 ), RNPH_SHESW (A1RET8 ), RNPH_SHEWM (B1KL12 ), RNPH_SHIB3 (B2TTV7 ), RNPH_SHIBS (Q31UY3 ), RNPH_SHIDS (Q329L3 ), RNPH_SHIF8 (Q0SYH0 ), RNPH_SHIFL (Q83PN2 ), RNPH_SHISS (Q3YW05 ), RNPH_SINFN (C3MEJ1 ), RNPH_SINMW (A6U5E0 ), RNPH_SODGM (Q2NQT7 ), RNPH_SOLUE (Q01NZ9 ), RNPH_SPHAL (Q1GWJ5 ), RNPH_SPHWW (A5V3R9 ), RNPH_STRAW (Q82D17 ), RNPH_STRCO (Q9S2H7 ), RNPH_STRGG (B1VVV6 ), RNPH_STRM5 (B4SU06 ), RNPH_STRMK (B2FT17 ), RNPH_SULSY (B2V890 ), RNPH_SYMTH (Q67SL5 ), RNPH_SYNAS (Q2LTS3 ), RNPH_SYNE7 (Q31PB6 ), RNPH_SYNJA (Q2JRJ9 ), RNPH_SYNJB (Q2JKT3 ), RNPH_SYNP6 (Q5N4V3 ), RNPH_SYNPX (Q7U9I1 ), RNPH_SYNSC (Q3AMY6 ), RNPH_SYNWW (Q0AZR6 ), RNPH_TERTT (C5BLF9 ), RNPH_THEEB (Q8DLA4 ), RNPH_THEP3 (B0KBM5 ), RNPH_THEPX (B0K3T4 ), RNPH_THISH (B8GPB2 ), RNPH_TOLAT (C4L818 ), RNPH_TRIV2 (Q3M9Q2 ), RNPH_TROW8 (Q83HF6 ), RNPH_TROWT (Q83FT1 ), RNPH_VIBCH (Q9KVD6 ), RNPH_VIBPA (Q87T93 ), RNPH_VIBTL (B7VHJ7 ), RNPH_VIBVU (Q8DDX4 ), RNPH_VIBVY (Q7MPT3 ), RNPH_XANAC (Q8PH63 ), RNPH_XANC5 (Q3BPR8 ), RNPH_XANC8 (Q4UY39 ), RNPH_XANCB (B0RP96 ), RNPH_XANCP (Q8P5T5 ), RNPH_XANOM (Q2P6N2 ), RNPH_XANOP (B2SLL1 ), RNPH_XANP2 (A7IID4 ), RNPH_XYLF2 (B2IA38 ), RNPH_XYLFA (Q9PD74 ), RNPH_XYLFM (B0U6W7 ), RNPH_XYLFT (Q87DG3 ), RNPH_YERE8 (A1JHW7 ), RNPH_YERP3 (A7FCS9 ), RNPH_YERPA (Q1C262 ), RNPH_YERPB (B2JYM8 ), RNPH_YERPE (Q8ZJP8 ), RNPH_YERPG (A9R668 ), RNPH_YERPN (Q1CCZ7 ), RNPH_YERPP (A4TSE2 ), RNPH_YERPS (Q66GE1 ), RNPH_YERPY (B1JQX8 ), RNPH_ZYMMO (Q5NRL6 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
8 sequences
CER7L_ARATH (Q9LDM2 ), CER7_ARATH (Q9M209 ), MTR3_SCHPO (Q9P7R3 ), RNPH_DICT6 (B5YEU4 ), RNPH_FRACC (Q2JEN8 ), RNPH_FRASN (A8L766 ), RNPH_GLOC7 (B7KB81 ), RNPH_THEYD (B5YFY8 )» more |
| PDB [Detailed view] |
11 PDB
1OYP; 1OYR; 1OYS; 1R6L; 1R6M; 1UDN; 1UDO; 1UDQ; 1UDS; 3B4T; 3DD6 |
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