PROSITE entry PS01315
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| Entry name [info] | CDS |
| Accession [info] | PS01315 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUL-1998 CREATED;
01-DEC-2004 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC01019 |
Name and characterization of the entry
| Description [info] | Phosphatidate cytidylyltransferase signature. |
| Pattern [info] |
S-x-[LIVMF]-K-R-x(4)-K-D-x-[GSA]-x(2)-[LIF]-[PGS]-x-H-G-G-[LIVMF]-x-D-R- [LIVMFT]-D. |
Numerical results [info]
| Total number of hits | 55 in 55 different sequences |
| Number of true positive hits | 55 in 55 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 3 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 94.83 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
55 sequences
CDS1_ARATH (O04928 ), CDS1_ENCCU (Q95ZE3 ), CDS1_HUMAN (Q92903 ), CDS1_MOUSE (P98191 ), CDS1_RAT (O35052 ), CDS1_SOLTU (O04940 ), CDS1_YEAST (P38221 ), CDS2_ARATH (O49639 ), CDS2_BOVIN (A0JNC1 ), CDS2_HUMAN (O95674 ), CDS2_MOUSE (Q99L43 ), CDS2_RAT (Q91XU8 ), CDS3_ARATH (Q1PE48 ), CDS4_ARATH (Q94A03 ), CDS5_ARATH (Q9M001 ), CDSA_AQUAE (O67292 ), CDSA_BACSU (O31752 ), CDSA_BRUA2 (Q2YRP9 ), CDSA_BRUAB (P0C102 ), CDSA_BRUME (Q8YHH2 ), CDSA_BRUSU (Q8G0E0 ), CDSA_CAEEL (P53439 ), CDSA_ECO57 (P0ABG2 ), CDSA_ECOLI (P0ABG1 ), CDSA_HAEIN (P44937 ), CDSA_HELPJ (Q9ZML7 ), CDSA_HELPY (O25004 ), CDSA_MYCBO (P63759 ), CDSA_MYCGE (Q49433 ), CDSA_MYCLE (Q9CBU1 ), CDSA_MYCPN (P75160 ), CDSA_MYCTO (P9WPF6 ), CDSA_MYCTU (P9WPF7 ), CDSA_PSEAE (Q59640 ), CDSA_RICBR (Q1RII7 ), CDSA_RICCN (Q92I31 ), CDSA_RICFE (Q4ULR7 ), CDSA_RICPR (Q9ZDA8 ), CDSA_RICTY (Q68WV5 ), CDSA_SHIFL (P0ABG3 ), CDSA_STAAC (Q5HGH0 ), CDSA_STAAM (Q99UL1 ), CDSA_STAAN (Q7A5Y4 ), CDSA_STAAR (Q6GHH4 ), CDSA_STAAS (Q6G9V2 ), CDSA_STAAW (Q7A121 ), CDSA_STAEQ (Q5HPT0 ), CDSA_STAES (Q8CST9 ), CDSA_STAHJ (Q4L5W3 ), CDSA_STAS1 (Q49X46 ), CDSA_SYNY3 (P73548 ), CDSA_THEMA (Q9X1B7 ), CDSH_SCHPO (Q9P381 ), CDS_DROME (P56079 ), YNBB_ECOLI (P76091 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
3 sequences
CDSA_CHLMU (Q9PJU1 ), CDSA_CHLPN (Q9Z7Y6 ), CDSA_CHLTR (O84457 ) |
| PDB [Detailed view] |
1 PDB
4Q2G |