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PROSITE entry PS01315


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General information about the entry

Entry name [info] CDS
Accession [info] PS01315
Entry type [info] PATTERN
Date [info] 01-JUL-1998 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC01019

Name and characterization of the entry

Description [info] Phosphatidate cytidylyltransferase signature.
Pattern [info]
S-x-[LIVMF]-K-R-x(4)-K-D-x-[GSA]-x(2)-[LIF]-[PGS]-x-H-G-G-[LIVMF]-x-D-R-
[LIVMFT]-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 55 in 55 different sequences
Number of true positive hits 55 in 55 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.83 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
55 sequences

CDS1_ARATH  (O04928), CDS1_ENCCU  (Q95ZE3), CDS1_HUMAN  (Q92903), 
CDS1_MOUSE  (P98191), CDS1_RAT(O35052), CDS1_SOLTU  (O04940), 
CDS1_YEAST  (P38221), CDS2_ARATH  (O49639), CDS2_BOVIN  (A0JNC1), 
CDS2_HUMAN  (O95674), CDS2_MOUSE  (Q99L43), CDS2_RAT(Q91XU8), 
CDS3_ARATH  (Q1PE48), CDS4_ARATH  (Q94A03), CDS5_ARATH  (Q9M001), 
CDSA_AQUAE  (O67292), CDSA_BACSU  (O31752), CDSA_BRUA2  (Q2YRP9), 
CDSA_BRUAB  (P0C102), CDSA_BRUME  (Q8YHH2), CDSA_BRUSU  (Q8G0E0), 
CDSA_CAEEL  (P53439), CDSA_ECO57  (P0ABG2), CDSA_ECOLI  (P0ABG1), 
CDSA_HAEIN  (P44937), CDSA_HELPJ  (Q9ZML7), CDSA_HELPY  (O25004), 
CDSA_MYCBO  (P63759), CDSA_MYCGE  (Q49433), CDSA_MYCLE  (Q9CBU1), 
CDSA_MYCPN  (P75160), CDSA_MYCTO  (P9WPF6), CDSA_MYCTU  (P9WPF7), 
CDSA_PSEAE  (Q59640), CDSA_RICBR  (Q1RII7), CDSA_RICCN  (Q92I31), 
CDSA_RICFE  (Q4ULR7), CDSA_RICPR  (Q9ZDA8), CDSA_RICTY  (Q68WV5), 
CDSA_SHIFL  (P0ABG3), CDSA_STAAC  (Q5HGH0), CDSA_STAAM  (Q99UL1), 
CDSA_STAAN  (Q7A5Y4), CDSA_STAAR  (Q6GHH4), CDSA_STAAS  (Q6G9V2), 
CDSA_STAAW  (Q7A121), CDSA_STAEQ  (Q5HPT0), CDSA_STAES  (Q8CST9), 
CDSA_STAHJ  (Q4L5W3), CDSA_STAS1  (Q49X46), CDSA_SYNY3  (P73548), 
CDSA_THEMA  (Q9X1B7), CDSH_SCHPO  (Q9P381), CDS_DROME   (P56079), 
YNBB_ECOLI  (P76091)
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

CDSA_CHLMU  (Q9PJU1), CDSA_CHLPN  (Q9Z7Y6), CDSA_CHLTR  (O84457)

		
PDB
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1 PDB

4Q2G