PROSITE entry PS01315
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS01315 |
| Entry name [info] | CDS |
| Accession [info] | PS01315 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUL-1998 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC01019 |
Name and characterization of the entry
| Description [info] | Phosphatidate cytidylyltransferase signature. |
| Pattern [info] |
S-x-[LIVMF]-K-R-x(4)-K-D-x-[GSA]-x(2)-[LIF]-[PGS]-x-H-G-G-[LIVMF]-x-D-R- [LIVMFT]-D. |
Numerical results [info]
| Total number of hits | 55 in 55 different sequences |
| Number of true positive hits | 55 in 55 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 3 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 94.83 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
55 sequences
CDS1_ARATH (O04928), CDS1_ENCCU (Q95ZE3), CDS1_HUMAN (Q92903), CDS1_MOUSE (P98191), CDS1_RAT(O35052), CDS1_SCHPO (Q9P381), CDS1_SOLTU (O04940), CDS1_YEAST (P38221), CDS2_ARATH (O49639), CDS2_BOVIN (A0JNC1), CDS2_HUMAN (O95674), CDS2_MOUSE (Q99L43), CDS2_RAT(Q91XU8), CDS3_ARATH (Q1PE48), CDS4_ARATH (Q94A03), CDS5_ARATH (Q9M001), CDSA_AQUAE (O67292), CDSA_BACSU (O31752), CDSA_BRUA2 (Q2YRP9), CDSA_BRUAB (P0C102), CDSA_BRUME (Q8YHH2), CDSA_BRUSU (Q8G0E0), CDSA_CAEEL (P53439), CDSA_ECO57 (P0ABG2), CDSA_ECOLI (P0ABG1), CDSA_HAEIN (P44937), CDSA_HELPJ (Q9ZML7), CDSA_HELPY (O25004), CDSA_MYCBO (P63759), CDSA_MYCGE (Q49433), CDSA_MYCLE (Q9CBU1), CDSA_MYCPN (P75160), CDSA_MYCTO (P9WPF6), CDSA_MYCTU (P9WPF7), CDSA_PSEAE (Q59640), CDSA_RICBR (Q1RII7), CDSA_RICCN (Q92I31), CDSA_RICFE (Q4ULR7), CDSA_RICPR (Q9ZDA8), CDSA_RICTY (Q68WV5), CDSA_SHIFL (P0ABG3), CDSA_STAAC (Q5HGH0), CDSA_STAAM (Q99UL1), CDSA_STAAN (Q7A5Y4), CDSA_STAAR (Q6GHH4), CDSA_STAAS (Q6G9V2), CDSA_STAAW (Q7A121), CDSA_STAEQ (Q5HPT0), CDSA_STAES (Q8CST9), CDSA_STAHJ (Q4L5W3), CDSA_STAS1 (Q49X46), CDSA_SYNY3 (P73548), CDSA_THEMA (Q9X1B7), CDS_DROME (P56079), YNBB_ECOLI (P76091)» more
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| UniProtKB/Swiss-Prot False negative sequences |
3 sequences
CDSA_CHLMU (Q9PJU1), CDSA_CHLPN (Q9Z7Y6), CDSA_CHLTR (O84457) |
| PDB [Detailed view] |
1 PDB
4Q2G |