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PROSITE entry PS01326


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General information about the entry

Entry name [info] DAP_EPIMERASE
Accession [info] PS01326
Entry type [info] PATTERN
Date [info] 01-JUL-1999 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC01029
Associated ProRule [info] PRU10125

Name and characterization of the entry

Description [info] Diaminopimelate epimerase signature.
Pattern [info]
N-x-[DN]-[GS]-[SENGFT]-x(4)-C-[GI]-N-[GA]-x-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 413 in 413 different sequences
Number of true positive hits 413 in 413 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 10
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.64 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 7
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
413 sequences

DAPF1_NOSS1 (Q8YVD0), DAPF_ACAM1  (B0C312), DAPF_ACET2  (A3DK16), 
DAPF_ACIAD  (Q6F950), DAPF_ACIB3  (B7GY71), DAPF_ACIB5  (B7I5Y5), 
DAPF_ACIBC  (B2HX82), DAPF_ACIBS  (B0VT30), DAPF_ACIBT  (A3M804), 
DAPF_ACIBY  (B0VDN4), DAPF_ACIC1  (A0LUZ5), DAPF_ACICJ  (A5G1F7), 
DAPF_ACIET  (B9MFT0), DAPF_ACTP2  (A3N2H9), DAPF_ACTP7  (B3GYL3), 
DAPF_ACTPJ  (B0BRC5), DAPF_ACTSZ  (A6VQR8), DAPF_AERHH  (A0KFI1), 
DAPF_AERS4  (A4SRW9), DAPF_AFIC5  (B6JAP3), DAPF_AGARV  (C4Z900), 
DAPF_AGRFC  (Q8UC03), DAPF_ALCBS  (Q0VM18), DAPF_ALIF1  (Q5E1W7), 
DAPF_ALISL  (B6EP85), DAPF_ALKEH  (Q0ACL9), DAPF_ALKMQ  (A6TRX5), 
DAPF_ALKOO  (A8MH77), DAPF_ALLAM  (B9JUB9), DAPF_AQUAE  (O67693), 
DAPF_ARATH  (Q9LFG2), DAPF_ARCFU  (O29511), DAPF_AROAE  (Q5P2V2), 
DAPF_AZOPC  (B6YS11), DAPF_AZOSB  (A1K306), DAPF_AZOVD  (C1DJ56), 
DAPF_BACAA  (C3PDH0), DAPF_BACAC  (C3LC72), DAPF_BACAH  (A0RKC7), 
DAPF_BACAN  (Q81XR2), DAPF_BACC0  (B7JDJ2), DAPF_BACC1  (Q72YE7), 
DAPF_BACC2  (B7IMV5), DAPF_BACC3  (C1EX98), DAPF_BACC4  (B7HBI0), 
DAPF_BACC7  (B7HUS8), DAPF_BACCN  (A7GUE1), DAPF_BACCR  (Q816D1), 
DAPF_BACCZ  (Q632C7), DAPF_BACFR  (Q64SY7), DAPF_BACHK  (Q6HBW8), 
DAPF_BACLD  (Q65FD6), DAPF_BACMK  (A9VN01), DAPF_BACP2  (A8FH15), 
DAPF_BACSU  (O32114), DAPF_BACTN  (Q8AAB7), DAPF_BACVZ  (A7Z8D3), 
DAPF_BARBK  (A1UQV5), DAPF_BARHE  (Q6G1L7), DAPF_BARQU  (Q6FYC7), 
DAPF_BART1  (A9IZW1), DAPF_BAUCH  (Q1LTX0), DAPF_BEII9  (B2IEM1), 
DAPF_BLOFL  (Q7VRM5), DAPF_BLOPB  (Q491Z7), DAPF_BRADU  (Q89X45), 
DAPF_BRAHW  (C0QZX1), DAPF_BRASB  (A5E915), DAPF_BRASO  (A4YKA5), 
DAPF_BRUA1  (B2S885), DAPF_BRUA2  (Q2YLR4), DAPF_BRUA4  (A6WXE4), 
DAPF_BRUAB  (Q57AW6), DAPF_BRUC2  (A9M8R8), DAPF_BRUMB  (C0RFH7), 
DAPF_BRUME  (Q8YJF0), DAPF_BRUO2  (A5VSQ7), DAPF_BRUSI  (B0CIT6), 
DAPF_BRUSU  (Q8FYF0), DAPF_BUCA5  (B8D8F1), DAPF_BUCAI  (P57649), 
DAPF_BUCAP  (Q8K901), DAPF_BUCAT  (B8D8A8), DAPF_BUCBP  (P59582), 
DAPF_BURCM  (Q0BAY6), DAPF_BURM7  (A3MRQ6), DAPF_BURM9  (A2S862), 
DAPF_BURMA  (Q62EZ3), DAPF_BURMS  (A1V7L3), DAPF_BURP0  (A3NQ71), 
DAPF_BURP6  (A3N4H9), DAPF_BURPS  (Q63YH7), DAPF_BURTA  (Q2T269), 
DAPF_BURVG  (A4JIQ6), DAPF_CALS4  (Q8R9S4), DAPF_CAMJ8  (A8FNJ1), 
DAPF_CAMJD  (A7H5P5), DAPF_CAMJE  (Q9PMD8), DAPF_CAMJJ  (A1W1D0), 
DAPF_CAMJR  (Q5HSQ5), DAPF_CAMLR  (B9KED6), DAPF_CARHZ  (Q3AC09), 
DAPF_CAUSK  (B0T542), DAPF_CAUVC  (Q9A280), DAPF_CAUVN  (B8GVW2), 
DAPF_CELJU  (B3PEI8), DAPF_CERS4  (Q3IZB6), DAPF_CHESB  (Q11CW3), 
DAPF_CHLMU  (Q9PJW2), DAPF_CHLPN  (Q9Z833), DAPF_CHLT2  (B0B802), 
DAPF_CHLTA  (Q3KLS0), DAPF_CHLTB  (B0BC67), DAPF_CHLTE  (Q8KAX9), 
DAPF_CHLTR  (O84437), DAPF_CHRSD  (Q1QSV1), DAPF_CHRVO  (Q7NV18), 
DAPF_CLAM3  (A5CSL3), DAPF_CLASE  (B0RHB0), DAPF_CLOAB  (Q97FV2), 
DAPF_CLOPE  (Q46185), DAPF_COLP3  (Q48AR8), DAPF_CORA7  (C3PGX6), 
DAPF_COREF  (Q8FPE1), DAPF_CORGB  (A4QEV1), DAPF_CORGL  (Q8NP73), 
DAPF_COXB1  (B6J630), DAPF_COXB2  (B6J395), DAPF_COXBN  (A9KGY8), 
DAPF_COXBR  (A9N9J6), DAPF_COXBU  (Q83AD4), DAPF_CROS8  (A7MQK2), 
DAPF_CUPMC  (Q1LS37), DAPF_CUPNH  (Q0KF42), DAPF_CUPPJ  (Q476V3), 
DAPF_CUPTR  (B2AGE5), DAPF_CYAP4  (B8HU20), DAPF_DECAR  (Q47JN0), 
DAPF_DESAH  (C0QAP3), DAPF_DESAP  (B1I545), DAPF_DESDA  (B8IZX7), 
DAPF_DESHD  (B8FSD4), DAPF_DESRM  (A4J568), DAPF_ECO24  (A7ZU14), 
DAPF_ECO27  (B7UNC6), DAPF_ECO45  (B7MH73), DAPF_ECO55  (B7L969), 
DAPF_ECO57  (P0A6K2), DAPF_ECO5E  (B5YY56), DAPF_ECO7I  (B7NTD3), 
DAPF_ECO81  (B7MR29), DAPF_ECO8A  (B7M611), DAPF_ECOBW  (C4ZZ73), 
DAPF_ECODH  (B1XAH6), DAPF_ECOHS  (A8A6R7), DAPF_ECOL5  (Q0TAR6), 
DAPF_ECOL6  (Q8FBN6), DAPF_ECOLC  (B1IW95), DAPF_ECOLI  (P0A6K1), 
DAPF_ECOLU  (B7NFB1), DAPF_ECOSM  (B1LLY0), DAPF_EDWI9  (C5BBD4), 
DAPF_ELUMP  (B2KDH2), DAPF_ENT38  (A4WG08), DAPF_ENTFA  (Q838I3), 
DAPF_ERWT9  (B2VI49), DAPF_ERYLH  (Q2NBR6), DAPF_ESCF3  (B7LU47), 
DAPF_FLAPJ  (A6GYX5), DAPF_GEOKA  (Q5KVP4), DAPF_GEOSW  (C5D729), 
DAPF_GEOTN  (A4ISE8), DAPF_GLAP5  (B8F878), DAPF_GLOC7  (B7KH06), 
DAPF_GLUOX  (Q5FQZ4), DAPF_GRABC  (Q0BS04), DAPF_HAEDU  (Q7VPN0), 
DAPF_HAEI8  (Q4QME8), DAPF_HAEIE  (A5UDX5), DAPF_HAEIG  (A5UHQ4), 
DAPF_HAEIN  (P44859), DAPF_HAHCH  (Q2SQ64), DAPF_HALH5  (Q9K7F0), 
DAPF_HALHL  (A1WWB3), DAPF_HALOH  (B8CX90), DAPF_HELMI  (B0TGR9), 
DAPF_HELP2  (B6JLE8), DAPF_HELPG  (B5Z6T7), DAPF_HELPH  (Q1CTW0), 
DAPF_HELPJ  (Q9ZLR5), DAPF_HELPS  (B2UTR2), DAPF_HELPY  (O25290), 
DAPF_HERAR  (A4G980), DAPF_HISS1  (Q0I572), DAPF_HISS2  (B0UWU6), 
DAPF_HYDS0  (B4U9P0), DAPF_IDILO  (Q5QUS6), DAPF_LACPL  (Q88V90), 
DAPF_LARHH  (C1D8Q0), DAPF_LEIXX  (Q6AE05), DAPF_LEPBA  (B0SC36), 
DAPF_LEPBJ  (Q04W97), DAPF_LEPBL  (Q04X60), DAPF_LEPIC  (Q72W63), 
DAPF_LEPIN  (Q8F9V5), DAPF_LIGS1  (Q1WTU5), DAPF_LISIN  (Q929Z7), 
DAPF_LISMC  (C1KWW2), DAPF_LISMF  (Q71Y02), DAPF_LISMH  (B8DBR3), 
DAPF_LISMO  (Q8Y5N9), DAPF_LISW6  (A0AKC4), DAPF_MAGMM  (A0LE31), 
DAPF_MANSM  (Q65RL9), DAPF_META3  (A6UTH4), DAPF_METAR  (Q0W3B6), 
DAPF_METC4  (B7KQM2), DAPF_METEP  (A9W6A5), DAPF_METJA  (Q58519), 
DAPF_METKA  (Q8TY71), DAPF_METM5  (A4FXV0), DAPF_METM6  (A9AB27), 
DAPF_METM7  (A6VFK8), DAPF_METMP  (Q6LYS1), DAPF_METNO  (B8I9H6), 
DAPF_METPB  (B1ZDT1), DAPF_METPP  (A2SKV9), DAPF_METS4  (B0UCI8), 
DAPF_METSB  (B8EM14), DAPF_METTH  (O27389), DAPF_MICAN  (B0JJ58), 
DAPF_MOOTA  (Q2RK34), DAPF_MYCA1  (A0QIQ8), DAPF_MYCA9  (B1MD00), 
DAPF_MYCBO  (P63898), DAPF_MYCBP  (A1KM64), DAPF_MYCBT  (C1AFI5), 
DAPF_MYCGI  (A4TCN3), DAPF_MYCLB  (B8ZQU1), DAPF_MYCLE  (P46814), 
DAPF_MYCMM  (B2HL16), DAPF_MYCPA  (Q73W21), DAPF_MYCS2  (A0QVY0), 
DAPF_MYCSJ  (A3PYF9), DAPF_MYCSK  (A1UEZ9), DAPF_MYCTA  (A5U678), 
DAPF_MYCTO  (P9WP18), DAPF_MYCTU  (P9WP19), DAPF_MYCUA  (A0PT80), 
DAPF_MYCVP  (A1T7U8), DAPF_NATTJ  (B2A663), DAPF_NEIMA  (Q9JV69), 
DAPF_NEIMB  (Q9K060), DAPF_NITEC  (Q0AIP0), DAPF_NITEU  (Q82U84), 
DAPF_NITHX  (Q1QHJ3), DAPF_NITMU  (Q2Y5Z0), DAPF_NITOC  (Q3JEA2), 
DAPF_NITSB  (A6Q160), DAPF_NOSP7  (B2J3A7), DAPF_OCEIH  (Q8ENX2), 
DAPF_ORYSI  (A2ZLS4), DAPF_ORYSJ  (Q2QNF7), DAPF_PARC0  (A1TKA9), 
DAPF_PARD8  (A6L8U3), DAPF_PARP8  (B2JJY4), DAPF_PARPJ  (B2T1P5), 
DAPF_PARXL  (Q146W2), DAPF_PASMU  (P57962), DAPF_PECAS  (Q6CZG8), 
DAPF_PECCP  (C6DHB7), DAPF_PELTS  (A5D193), DAPF_PELUB  (Q4FP10), 
DAPF_PHEZH  (B4RCE2), DAPF_PHOLL  (Q7MYN5), DAPF_PHOPR  (Q6LLN5), 
DAPF_PHOV8  (A6L7E5), DAPF_PICP2  (B1XP39), DAPF_PROM1  (A2C243), 
DAPF_PROMH  (B4F1X7), DAPF_PROMM  (Q7V7M5), DAPF_PROMT  (Q46L14), 
DAPF_PSE14  (Q48C02), DAPF_PSEA6  (Q15NG5), DAPF_PSEA7  (A6VE52), 
DAPF_PSEA8  (B7V5G9), DAPF_PSEAB  (Q02E84), DAPF_PSEAE  (Q51564), 
DAPF_PSEE4  (Q1I303), DAPF_PSEFL  (O05322), DAPF_PSEMY  (A4XNX4), 
DAPF_PSEPF  (Q3K4R8), DAPF_PSEPG  (B0KQ41), DAPF_PSEPK  (Q88CF3), 
DAPF_PSEPW  (B1J1W0), DAPF_PSESM  (Q88B09), DAPF_PSET1  (Q3IEW3), 
DAPF_PSEU2  (Q500B6), DAPF_PSYA2  (Q4FV85), DAPF_PSYCK  (Q1QE99), 
DAPF_PSYIN  (A1SQZ9), DAPF_PSYWF  (A5WCB3), DAPF_RALN1  (Q8Y344), 
DAPF_RALPJ  (B2UD25), DAPF_RHIEC  (Q2K386), DAPF_RHILO  (Q98EB6), 
DAPF_RHILW  (B5ZTH4), DAPF_RHIME  (Q92L46), DAPF_RHIR8  (B9JCL3), 
DAPF_RHIWR  (A5VAG4), DAPF_RHOCS  (B6IP82), DAPF_RHOE4  (C0ZYN8), 
DAPF_RHOJR  (Q0S1N7), DAPF_RHOOB  (C1B393), DAPF_RHOP2  (Q2J390), 
DAPF_RHOP5  (Q07UV4), DAPF_RHOPA  (Q6ND59), DAPF_RHOPB  (Q21CU6), 
DAPF_RHOPS  (Q13DT7), DAPF_RHOPT  (B3Q862), DAPF_RICAE  (C3PNE1), 
DAPF_RICAH  (A8GND7), DAPF_RICB8  (A8GWH4), DAPF_RICBR  (Q1RIT1), 
DAPF_RICCK  (A8EZ08), DAPF_RICCN  (Q92I41), DAPF_RICFE  (Q4ULS7), 
DAPF_RICM5  (A8F1I9), DAPF_RICPR  (Q9ZDB7), DAPF_RICPU  (C4K2A3), 
DAPF_RICRO  (B0BXH3), DAPF_RICRS  (A8GS10), DAPF_RICTY  (Q68WW4), 
DAPF_RIPO1  (B7K1E7), DAPF_SACD2  (Q21P78), DAPF_SALA4  (B5EZS3), 
DAPF_SALDC  (B5FNU5), DAPF_SALHS  (B4TB37), DAPF_SALNS  (B4SZ51), 
DAPF_SALPA  (Q5PKM6), DAPF_SALPB  (A9MY70), DAPF_SALPK  (B5BIV6), 
DAPF_SALSV  (B4TNV9), DAPF_SALTI  (P0A1F3), DAPF_SALTY  (P0A1F2), 
DAPF_SERP5  (A8G852), DAPF_SHEAM  (A1SAP5), DAPF_SHEB2  (B8E690), 
DAPF_SHEB5  (A3D9Q0), DAPF_SHEB8  (A6WTF5), DAPF_SHEB9  (A9L5F5), 
DAPF_SHEDO  (Q12S90), DAPF_SHEFN  (Q088K8), DAPF_SHELP  (A3Q9P7), 
DAPF_SHEON  (Q8E9H5), DAPF_SHEPC  (A4YBF7), DAPF_SHESA  (A0KS65), 
DAPF_SHESH  (A8G0W0), DAPF_SHESM  (Q0HN95), DAPF_SHESR  (Q0HQJ2), 
DAPF_SHESW  (A1RPD2), DAPF_SHEWM  (B1KQD0), DAPF_SHIB3  (B2TUW5), 
DAPF_SHIF8  (Q0SZ00), DAPF_SODGM  (Q2NQF4), DAPF_SPHAL  (Q1GPI7), 
DAPF_STRCO  (O69969), DAPF_STUS1  (A4VGW5), DAPF_SYNE7  (Q31LW2), 
DAPF_SYNJA  (Q2JUV6), DAPF_SYNJB  (Q2JLR0), DAPF_SYNP6  (Q5N013), 
DAPF_SYNY3  (P74667), DAPF_TERTT  (C5BUL6), DAPF_THEFY  (Q47RR3), 
DAPF_THEMA  (Q9X1L0), DAPF_THEVB  (Q8DGM2), DAPF_THISH  (B8GT89), 
DAPF_TOLAT  (C4LDU8), DAPF_TRIEI  (Q116P1), DAPF_VARPS  (C5CND4), 
DAPF_VESOH  (A5CWN5), DAPF_VIBA3  (B7VMD4), DAPF_VIBC1  (A7N0W0), 
DAPF_VIBC3  (A5F4I6), DAPF_VIBCH  (Q9KVL6), DAPF_VIBPA  (Q87KJ4), 
DAPF_VIBVU  (Q8DD81), DAPF_VIBVY  (Q7MQC1), DAPF_WIGBR  (Q8D2T4), 
DAPF_WOLTR  (Q5GSB8), DAPF_WOLWR  (C0R4N2), DAPF_XANAC  (Q8PPQ1), 
DAPF_XANC8  (Q4UYY2), DAPF_XANCB  (B0RNK1), DAPF_XANCP  (Q8P548), 
DAPF_XANE5  (Q3BXU3), DAPF_XANOM  (Q2NYV5), DAPF_XYLF2  (B2IA16), 
DAPF_XYLFA  (Q9PD98), DAPF_XYLFM  (B0U6U5), DAPF_XYLFT  (Q87DI4), 
DAPF_YERE8  (A1JI90), DAPF_YERP3  (A7FD74), DAPF_YERPA  (Q1CBM6), 
DAPF_YERPB  (B2K072), DAPF_YERPE  (P46357), DAPF_YERPG  (A9R8K5), 
DAPF_YERPN  (Q1CNH8), DAPF_YERPP  (A4TRA3), DAPF_YERPS  (Q66FZ5), 
DAPF_YERPY  (B1JPE1), DAPF_ZYMMO  (Q5NNL4)
» more

UniProtKB/Swiss-Prot
False negative sequences
10 sequences

DAPF2_NOSS1 (P54897), DAPF_ALBFT  (Q21SV0), DAPF_GEMAT  (C1A8U3), 
DAPF_LEGPA  (Q5X822), DAPF_LEGPC  (A5IHM9), DAPF_LEGPH  (Q5ZYK6), 
DAPF_LEGPL  (Q5WZH5), DAPF_LEPCP  (B1Y6S6), DAPF_METTP  (A0B6C1), 
DAPF_RUTMC  (A1AWJ5)
» more

PDB
[Detailed view]
22 PDB

1BWZ; 1GQZ; 2GKE; 2GKJ; 2OTN; 2Q9J; 3EJX; 3EKM; 3FVE; 4IJZ; 4IK0; 5H2G; 5H2Y; 5HA4; 5M47; 5YGU; 6D13; 6D1Q; 6D1V; 6VCK; 6VCL; 6VCM
» more