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| Entry: PS01327 |
General information about the entry
| Entry name [info] | MSCL |
| Accession [info] | PS01327 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUL-1999 CREATED;
01-APR-2006 DATA UPDATE; 12-AUG-2020 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC01030 |
Name and characterization of the entry
| Description [info] | Large-conductance mechanosensitive channels mscL family signature. |
| Pattern [info] |
[KR]-G-N-[LIVM](2)-D-[LIVM]-A-[LIVM]-[GA]-[LIVM](3)-G. |
Numerical results [info]
| Total number of hits | 362 in 362 different sequences |
| Number of true positive hits | 362 in 362 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 22 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 94.27 % |
Comments [info]
| Taxonomic range [info] | Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
362 sequences
MSCL1_RHILO (Q98DH7 ), MSCL2_RHILO (Q98DG5 ), MSCL3_RHILO (Q98B79 ), MSCL_ACIAC (A1TTF7 ), MSCL_ACIAD (Q6FE93 ), MSCL_ACIB3 (B7GWU1 ), MSCL_ACIB5 (B7I868 ), MSCL_ACIBC (B2HYF5 ), MSCL_ACIBS (B0VRV0 ), MSCL_ACIBT (A3M8J6 ), MSCL_ACIBY (B0V4Z4 ), MSCL_ACIET (B9MDX6 ), MSCL_ACISJ (A1W457 ), MSCL_ACTP2 (A3N2P0 ), MSCL_ACTP7 (B3H2I9 ), MSCL_ACTPJ (B0BRR8 ), MSCL_ACTSZ (A6VKX7 ), MSCL_AERHH (A0KNB2 ), MSCL_AERS4 (A4SJT9 ), MSCL_AGRFC (Q8UHY0 ), MSCL_AGRRK (B9J924 ), MSCL_ALKOO (A8MGZ0 ), MSCL_ANAD2 (B8J6V0 ), MSCL_ANASK (B4UD86 ), MSCL_ANOFW (B7GLN3 ), MSCL_AROAE (Q5P4W4 ), MSCL_AZOSB (A1KC82 ), MSCL_AZOVD (C1DER3 ), MSCL_BACAA (C3PBD7 ), MSCL_BACAC (C3L9Y0 ), MSCL_BACAH (A0RJR6 ), MSCL_BACAN (Q81KR6 ), MSCL_BACC0 (B7JS48 ), MSCL_BACC1 (Q72Z61 ), MSCL_BACC2 (B7IKT7 ), MSCL_BACC3 (C1EV23 ), MSCL_BACC4 (B7H732 ), MSCL_BACC7 (B7HSK8 ), MSCL_BACCN (A7GTU7 ), MSCL_BACCQ (B9J176 ), MSCL_BACCR (Q816Z0 ), MSCL_BACCZ (Q633B8 ), MSCL_BACFN (Q5LGV7 ), MSCL_BACFR (Q64XQ8 ), MSCL_BACHK (Q6HCK7 ), MSCL_BACLD (Q65E27 ), MSCL_BACMK (A9VKI1 ), MSCL_BACP2 (A8FI71 ), MSCL_BACSU (P94585 ), MSCL_BACTN (Q89ZV7 ), MSCL_BACV8 (A6L685 ), MSCL_BACVZ (A7Z9K9 ), MSCL_BARBK (A1URL2 ), MSCL_BARHE (Q6G4F8 ), MSCL_BARQU (Q6G160 ), MSCL_BART1 (A9IQ78 ), MSCL_BDEBA (Q6MRC6 ), MSCL_BEII9 (B2ID03 ), MSCL_BRADU (Q89K46 ), MSCL_BRASO (A4YWD8 ), MSCL_BREBN (C0Z921 ), MSCL_BRUA1 (B2S9G8 ), MSCL_BRUA2 (Q2YPJ2 ), MSCL_BRUAB (Q57F40 ), MSCL_BRUC2 (A9M8A1 ), MSCL_BRUMB (C0RH35 ), MSCL_BRUME (Q8YFB7 ), MSCL_BRUO2 (A5VNQ9 ), MSCL_BRUSI (B0CJU8 ), MSCL_BRUSU (Q8G2K1 ), MSCL_BURA4 (B1YS18 ), MSCL_BURCA (Q1BHB3 ), MSCL_BURCC (B1JTX9 ), MSCL_BURCH (A0K875 ), MSCL_BURCJ (B4EC31 ), MSCL_BURCM (Q0BEC9 ), MSCL_BURL3 (Q39FB0 ), MSCL_BURM1 (A9AIS5 ), MSCL_BURM7 (A3MKN7 ), MSCL_BURM9 (A2SBC7 ), MSCL_BURMA (Q62JH4 ), MSCL_BURMS (A1V513 ), MSCL_BURP0 (A3NWF4 ), MSCL_BURP1 (Q3JR90 ), MSCL_BURP6 (A3NAN4 ), MSCL_BURPS (Q63T62 ), MSCL_BURTA (Q2SWU6 ), MSCL_BURVG (A4JF27 ), MSCL_CAMC1 (A7ZCB7 ), MSCL_CAMC5 (A7GXI2 ), MSCL_CAMHC (A7I339 ), MSCL_CAUSK (B0T274 ), MSCL_CAUVC (Q9A2H6 ), MSCL_CAUVN (B8H6A4 ), MSCL_CHLAA (A9WJI9 ), MSCL_CHLAD (B8G6C2 ), MSCL_CHLCH (Q3ANR9 ), MSCL_CHLP8 (B3QN57 ), MSCL_CHLPB (B3EL80 ), MSCL_CHLPD (A1BFW8 ), MSCL_CHLPM (A4SEF1 ), MSCL_CHLTE (Q8KD14 ), MSCL_CHRVO (Q7NYB4 ), MSCL_CITK8 (A8AQI5 ), MSCL_CLOP1 (Q0TUQ9 ), MSCL_CLOPE (P53380 ), MSCL_CLOPS (Q0SWK0 ), MSCL_CROS8 (A7MPE5 ), MSCL_CUPMC (Q1LIC3 ), MSCL_CUPNH (Q0K6A4 ), MSCL_CUPPJ (Q46WM9 ), MSCL_CYTH3 (Q11TN7 ), MSCL_DEHMB (A5FPV4 ), MSCL_DEHMC (Q3ZYR8 ), MSCL_DELAS (A9BX57 ), MSCL_DESHD (B8FTI4 ), MSCL_DESHY (Q24Y14 ), MSCL_DINSH (A8LLI0 ), MSCL_ECO24 (A7ZSH9 ), MSCL_ECO27 (B7UK14 ), MSCL_ECO45 (B7MCQ6 ), MSCL_ECO55 (B7LHZ2 ), MSCL_ECO57 (P0A743 ), MSCL_ECO5E (B5YT10 ), MSCL_ECO7I (B7NLL0 ), MSCL_ECO81 (B7N0T1 ), MSCL_ECO8A (B7M0Z6 ), MSCL_ECOBW (C4ZUE5 ), MSCL_ECODH (B1X6E2 ), MSCL_ECOHS (A8A595 ), MSCL_ECOK1 (A1AGI2 ), MSCL_ECOL5 (Q0TCH1 ), MSCL_ECOL6 (Q8FD11 ), MSCL_ECOLC (B1IQ09 ), MSCL_ECOLI (P0A742 ), MSCL_ECOLU (B7NDR2 ), MSCL_ECOSE (B6I204 ), MSCL_ECOSM (B1LGP7 ), MSCL_ECOUT (Q1R642 ), MSCL_ENT38 (A4WF99 ), MSCL_ERWT9 (B2VK97 ), MSCL_ESCF3 (B7LRQ7 ), MSCL_EXIS2 (B1YKK2 ), MSCL_EXISA (C4KYQ8 ), MSCL_FLAJ1 (A5FKC3 ), MSCL_FUSNN (Q8RFE0 ), MSCL_GEOKA (Q5L081 ), MSCL_GEOLS (B3EA78 ), MSCL_GEOMG (Q39SN1 ), MSCL_GEOSL (Q749E9 ), MSCL_GEOSW (C5DA22 ), MSCL_GEOTN (A4IMP7 ), MSCL_GLUOX (Q5FNB7 ), MSCL_HAEDU (Q7VKA0 ), MSCL_HAEI8 (Q4QMW0 ), MSCL_HAEIE (A5UEB0 ), MSCL_HAEIG (A5UH89 ), MSCL_HAEIN (P44789 ), MSCL_HAES1 (Q0I185 ), MSCL_HATHI (Q9X722 ), MSCL_HERA2 (A9B815 ), MSCL_HERAR (A4G9H5 ), MSCL_HISS2 (B0UWZ1 ), MSCL_JANMA (A6T365 ), MSCL_KLEP3 (B5XNC0 ), MSCL_KLEP7 (A6TEU4 ), MSCL_LACAC (Q5FLW0 ), MSCL_LACBA (Q03SF6 ), MSCL_LACCB (B3WAS8 ), MSCL_LACF3 (B2GEU1 ), MSCL_LACGA (Q041C3 ), MSCL_LACH4 (A8YTR2 ), MSCL_LACJO (Q74HV9 ), MSCL_LACLA (Q9CDW0 ), MSCL_LACLM (A2RNQ7 ), MSCL_LACLS (Q02W23 ), MSCL_LACP3 (Q034S0 ), MSCL_LACPL (Q88X97 ), MSCL_LACRD (A5VIB3 ), MSCL_LACRJ (B2G5U0 ), MSCL_LACS1 (Q1WVR1 ), MSCL_LACSS (Q38V39 ), MSCL_LARHH (C1DBZ0 ), MSCL_LEGPA (Q5X1Y7 ), MSCL_LEGPC (A5IEQ9 ), MSCL_LEGPH (Q5ZSH7 ), MSCL_LEGPL (Q5WTR2 ), MSCL_LEPCP (B1Y2I5 ), MSCL_LEUCK (B1MZU9 ), MSCL_LEUMM (Q03YJ0 ), MSCL_LISIN (Q929V3 ), MSCL_LISMC (C1KX17 ), MSCL_LISMF (Q71XV0 ), MSCL_LISMH (B8DH65 ), MSCL_LISMO (Q8Y5J6 ), MSCL_LISW6 (A0AKH0 ), MSCL_LYSSC (B1HRA8 ), MSCL_MACCJ (B9EBV2 ), MSCL_MANSM (Q65QF7 ), MSCL_METC4 (B7KPQ5 ), MSCL_METEP (A9W5W6 ), MSCL_METFK (Q1H3M0 ), MSCL_METPB (B1ZC68 ), MSCL_METPP (A2SE21 ), MSCL_METRJ (B1M0R9 ), MSCL_MYCBO (P0A5K9 ), MSCL_MYCBP (A1KHC1 ), MSCL_MYCBT (C1ALX4 ), MSCL_MYCLB (B8ZU13 ), MSCL_MYCLE (Q9Z5G4 ), MSCL_MYCMM (B2HEA6 ), MSCL_MYCTA (A5U127 ), MSCL_MYCTO (P9WJN4 ), MSCL_MYCTU (P9WJN5 ), MSCL_MYCUA (A0PWB0 ), MSCL_NITHX (Q1QL44 ), MSCL_NITWN (Q3SRA3 ), MSCL_NOVAD (Q2G9Z8 ), MSCL_OCEIH (Q8CUT6 ), MSCL_OCHA4 (A6WVY7 ), MSCL_OLICO (B6JGA5 ), MSCL_PARD8 (A6L898 ), MSCL_PARDP (A1B4B3 ), MSCL_PARL1 (A7HR02 ), MSCL_PARP8 (B2JGJ7 ), MSCL_PARPJ (B2T3W8 ), MSCL_PARXL (Q13Z35 ), MSCL_PASMU (P57950 ), MSCL_PECAS (Q6CZZ8 ), MSCL_PECCA (O68284 ), MSCL_PECCP (C6DFR9 ), MSCL_PEDPA (Q03D91 ), MSCL_PELLD (Q3B3W2 ), MSCL_PELPB (B4SGK3 ), MSCL_PELPD (A1APN2 ), MSCL_PHEZH (B4RCK7 ), MSCL_POLNA (A1VK53 ), MSCL_PORG3 (B2RJU3 ), MSCL_PORGI (Q7MUZ1 ), MSCL_PROA2 (B4S9H4 ), MSCL_PROMH (B4F1L3 ), MSCL_PSE14 (Q48DU1 ), MSCL_PSEA7 (A6VC02 ), MSCL_PSEA8 (B7V0F9 ), MSCL_PSEAB (Q02G63 ), MSCL_PSEAE (Q9HVH7 ), MSCL_PSEE4 (Q1I4K7 ), MSCL_PSEF5 (Q4K5Q6 ), MSCL_PSEFL (O68286 ), MSCL_PSEFS (C3K2E3 ), MSCL_PSEP1 (A5W917 ), MSCL_PSEPF (Q3K6I0 ), MSCL_PSEPG (B0KHQ5 ), MSCL_PSEPK (Q88E23 ), MSCL_PSEPW (B1J2X0 ), MSCL_PSESM (Q87WB2 ), MSCL_PSEU2 (Q4ZNG6 ), MSCL_PSYA2 (Q4FUU9 ), MSCL_PSYCK (Q1QDU6 ), MSCL_PSYWF (A5WCE5 ), MSCL_RALPJ (B2UDT8 ), MSCL_RALSO (Q8XVA1 ), MSCL_RENSM (A9WMF7 ), MSCL_RHIE6 (B3PNR8 ), MSCL_RHIEC (Q2KCQ1 ), MSCL_RHIL3 (Q1MLQ8 ), MSCL_RHILW (B5ZPK8 ), MSCL_RHIME (Q92S72 ), MSCL_RHOP2 (Q2IWV4 ), MSCL_RHOPA (Q6N6D0 ), MSCL_RHOPB (Q214K6 ), MSCL_RHOPS (Q136W9 ), MSCL_RHOS1 (A3PMB5 ), MSCL_RHOS4 (Q3IZY4 ), MSCL_RHOS5 (A4WVB7 ), MSCL_ROSDO (Q16BG3 ), MSCL_ROSS1 (A5UVR8 ), MSCL_RUEPO (Q5LMR7 ), MSCL_SALA4 (B5F7R7 ), MSCL_SALAR (A9MN76 ), MSCL_SALCH (Q57J60 ), MSCL_SALDC (B5FJI6 ), MSCL_SALEP (B5R1E7 ), MSCL_SALG2 (B5RH45 ), MSCL_SALHS (B4TJY1 ), MSCL_SALNS (B4SUR2 ), MSCL_SALPA (Q5PIT4 ), MSCL_SALPB (A9N8B5 ), MSCL_SALPC (C0PZV3 ), MSCL_SALPK (B5BGV7 ), MSCL_SALSV (B4TXB4 ), MSCL_SALTI (P0A1X9 ), MSCL_SALTY (P0A1X8 ), MSCL_SERP5 (A8GKG9 ), MSCL_SHEB2 (B8ECI1 ), MSCL_SHEB5 (A3CZU7 ), MSCL_SHEB8 (A6WT30 ), MSCL_SHEB9 (A9L4L5 ), MSCL_SHEON (Q8EJE5 ), MSCL_SHEPC (A4YAR8 ), MSCL_SHESA (A0KSJ1 ), MSCL_SHESM (Q0HMW6 ), MSCL_SHESR (Q0HQW4 ), MSCL_SHESW (A1RFK8 ), MSCL_SHIB3 (B2U2R0 ), MSCL_SHIBS (Q31VY6 ), MSCL_SHISS (Q3YWW9 ), MSCL_SINFN (C3MFT5 ), MSCL_SINMW (A6U5U5 ), MSCL_SODGM (Q2NQQ0 ), MSCL_SPHAL (Q1GUG3 ), MSCL_SPHWW (A5VBY5 ), MSCL_STAA1 (A7X204 ), MSCL_STAA2 (A6U1G8 ), MSCL_STAA3 (Q2FH87 ), MSCL_STAA8 (P68805 ), MSCL_STAA9 (A5ISN0 ), MSCL_STAAB (Q2YXW9 ), MSCL_STAAC (Q5HG71 ), MSCL_STAAE (A6QGQ0 ), MSCL_STAAM (P68803 ), MSCL_STAAN (P68804 ), MSCL_STAAR (Q6GH57 ), MSCL_STAAS (Q6G9L1 ), MSCL_STAAW (P68806 ), MSCL_STACT (B9DP78 ), MSCL_STAEQ (Q5HPJ2 ), MSCL_STAES (Q8CPC4 ), MSCL_STAHJ (Q4L656 ), MSCL_STAS1 (Q49XE2 ), MSCL_STRM5 (B4STT2 ), MSCL_STRMK (B2FSD7 ), MSCL_SYMTH (Q67PL7 ), MSCL_SYNAS (Q2LUI9 ), MSCL_SYNWW (Q0AWD5 ), MSCL_SYNY3 (P73553 ), MSCL_THISH (B8GTM8 ), MSCL_TOLAT (C4LE79 ), MSCL_VARPS (C5CQL2 ), MSCL_VIBC3 (A5F037 ), MSCL_VIBCH (Q9KLX9 ), MSCL_VIBCM (C3LVM7 ), MSCL_XANAC (Q8PHE9 ), MSCL_XANC5 (Q3BQ08 ), MSCL_XANC8 (Q4UXZ0 ), MSCL_XANCB (B0RPI5 ), MSCL_XANCP (Q8P626 ), MSCL_XANOM (Q2P0I7 ), MSCL_XANOP (B2SWL6 ), MSCL_XANOR (Q5GXD6 ), MSCL_XYLF2 (B2I658 ), MSCL_XYLFA (Q9PHA5 ), MSCL_XYLFM (B0U1E0 ), MSCL_XYLFT (Q87FA1 ), MSCL_YERE8 (A1JRZ6 ), MSCL_YERP3 (A7FNK6 ), MSCL_YERPA (Q1C2X5 ), MSCL_YERPE (Q8ZJ83 ), MSCL_YERPG (A9R923 ), MSCL_YERPN (Q1CCX2 ), MSCL_YERPP (A4TH19 ), MSCL_YERPS (Q664V0 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
22 sequences
MSCL_BORBR (Q7WDW9 ), MSCL_BORPA (Q7W2W9 ), MSCL_BORPD (A9HW97 ), MSCL_BORPE (Q7W079 ), MSCL_BRAHW (C0QYW6 ), MSCL_CHLL2 (B3ECJ4 ), MSCL_CLOB8 (A6M387 ), MSCL_CLOTE (Q898L6 ), MSCL_DECAR (Q47AR9 ), MSCL_DESVM (B8DR67 ), MSCL_ENTFA (Q82ZB4 ), MSCL_FLAPJ (A6GYI6 ), MSCL_GEODF (B9M9E4 ), MSCL_HYPNA (Q0C5R9 ), MSCL_METSB (B8EJ45 ), MSCL_OENOB (Q04FK1 ), MSCL_SYNE7 (Q31LP8 ), MSCL_SYNJA (Q2JSN8 ), MSCL_SYNJB (Q2JLN5 ), MSCL_SYNP6 (Q5N075 ), MSCL_THIDA (Q3SG48 ), MSCL_ZYMMO (Q5NNP2 )» more |
| PDB [Detailed view] |
3 PDB
2OAR; 3HZQ; 6CTD |
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