PROSITE entry PS01346
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS01346 |
| Entry name [info] | CLAUDIN |
| Accession [info] | PS01346 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-2001 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC01045 |
Name and characterization of the entry
| Description [info] | Claudin family signature. |
| Pattern [info] |
[GN]-L-W-x(2)-C-x(7,9)-[STDENQH]-C. |
Numerical results [info]
| Total number of hits | 86 in 86 different sequences |
| Number of true positive hits | 77 in 77 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 9 in 9 different sequences |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 89.53 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
77 sequences
CLD10_BOVIN (Q5E9L0), CLD10_HUMAN (P78369), CLD10_MOUSE (Q9Z0S6), CLD10_PONAB (Q5R8E5), CLD11_BOVIN (Q3MHK4), CLD11_HUMAN (O75508), CLD11_MACFA (Q4R3L1), CLD11_MOUSE (Q60771), CLD11_PONAB (Q5REK8), CLD11_RAT (Q99P82), CLD12_BOVIN (Q0IIL2), CLD12_HUMAN (P56749), CLD12_MOUSE (Q9ET43), CLD12_PONAB (Q5R9K1), CLD13_MOUSE (Q9Z0S4), CLD14_HUMAN (O95500), CLD14_MOUSE (Q9Z0S3), CLD15_BOVIN (Q2KIY2), CLD15_HUMAN (P56746), CLD15_MOUSE (Q9Z0S5), CLD15_RAT (D3ZQJ0), CLD16_BOVIN (Q9XT98), CLD16_HUMAN (Q9Y5I7), CLD16_MOUSE (Q925N4), CLD16_RAT (Q91Y55), CLD17_HUMAN (P56750), CLD17_MOUSE (Q8BXA6), CLD17_PIG (C3VMW3), CLD18_BOVIN (Q0VCN0), CLD18_HUMAN (P56856), CLD18_MOUSE (P56857), CLD18_RAT (Q5I0E5), CLD19_HUMAN (Q8N6F1), CLD19_MOUSE (Q9ET38), CLD19_RAT (Q5QT56), CLD1_BOVIN (Q6L708), CLD1_HUMAN (O95832), CLD1_MOUSE (O88551), CLD1_RAT(P56745), CLD20_HUMAN (P56880), CLD22_HUMAN (Q8N7P3), CLD22_MOUSE (Q9D7U6), CLD23_HUMAN (Q96B33), CLD23_MOUSE (Q9D7D7), CLD24_HUMAN (A6NM45), CLD2_BOVIN (Q765P1), CLD2_CANLF (Q95KM6), CLD2_HUMAN (P57739), CLD2_MOUSE (O88552), CLD3_BOVIN (Q765N9), CLD3_CANLF (Q95KM5), CLD3_HUMAN (O15551), CLD3_MOUSE (Q9Z0G9), CLD3_RAT(Q63400), CLD4_BOVIN (Q6BBL6), CLD4_CANLF (A0A8C0N7E5), CLD4_CHLAE (O19005), CLD4_HUMAN (O14493), CLD4_MOUSE (O35054), CLD5_BOVIN (Q2HJ22), CLD5_HUMAN (O00501), CLD5_MOUSE (O54942), CLD5_RAT(Q9JKD6), CLD6_HUMAN (P56747), CLD6_MOUSE (Q9Z262), CLD7A_DANRE (Q6DHP1), CLD7B_DANRE (Q9YH92), CLD7_BOVIN (Q3B7N4), CLD7_HUMAN (O95471), CLD7_MOUSE (Q9Z261), CLD7_RAT(Q9Z1L1), CLD8_HUMAN (P56748), CLD8_MOUSE (Q9Z260), CLD9_HUMAN (O95484), CLD9_MOUSE (Q9Z0S7), CLDY_DANRE (Q9YH91), CLDZ_DANRE (Q9YH90)» more
|
| UniProtKB/Swiss-Prot False positive sequences |
9 sequences
ARI12_ARATH (Q84RQ9), CCG4_HUMAN (Q9UBN1), CCG4_MOUSE (Q9JJV4), CCG4_RAT(Q8VHW9), CCGL_MOUSE (Q9JJV3), CCGL_RAT(Q8VHW1), CLC2_CAEEL (Q11085), PUN1_YEAST (Q06991), SLA4_TRIAB (P81114)» more |
| PDB [Detailed view] |
15 PDB
3X29; 4P79; 5B2G; 6AKE; 6AKF; 6AKG; 6OV2; 6OV3; 7KP4; 7TDM; 7TDN; 8U4V; 8U5B; 9CMH; 9CMI » more |