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| Entry: PS01357 |
General information about the entry
| Entry name [info] | ZF_ZZ_1 |
| Accession [info] | PS01357 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-2001 CREATED;
01-DEC-2004 DATA UPDATE; 22-APR-2020 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC50135 |
Name and characterization of the entry
| Description [info] | Zinc finger ZZ-type signature. |
| Pattern [info] |
C-x(2)-C-x(4,8)-[RHDGSCV]-[YWFMVIL]-x-[CS]-x(2,5)-[CHEQ]-x-[DNSAGE]- [YFVLI]-x-[LIVFM]-C-x(2)-C. |
Numerical results [info]
| Total number of hits | 95 in 90 different sequences |
| Number of true positive hits | 94 in 89 different sequences |
| Number of 'unknown' hits | 1 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 6 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 94.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 3 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
89 sequences
ADA2_CANAL (Q59WH0 ), ADA2_SCHPO (Q9P7J7 ), ADA2_YEAST (Q02336 ), BIG_ARATH (Q9SRU2 ), BIG_ORYSJ (B9G2A8 ), CBP1_CAEEL (P34545 ), CBP_HUMAN (Q92793 ), CBP_MOUSE (P45481 ), CBP_RAT (Q6JHU9 ), DMDA_DROME (Q9VDW6 ), DMDB_DROME (Q9VDW3 ), DMDD_DROME (Q0KI50 ), DMDE_DROME (Q7YU29 ), DMD_CANLF (O97592 ), DMD_CHICK (P11533 ), DMD_HUMAN (P11532 ), DMD_MOUSE (P11531 ), DMD_PIG (Q5GN48 ), DMD_RAT (P11530 ), DRP2_HUMAN (Q13474 ), DRP2_MOUSE (Q05AA6 ), DRP2_RAT (Q9EPA0 ), DTN1_CAEEL (Q9Y048 ), DTNA_HUMAN (Q9Y4J8 ), DTNA_MOUSE (Q9D2N4 ), DTNB_HUMAN (O60941 ), DTNB_MOUSE (O70585 ), DTNB_RAT (P84060 ), DYTN_DANRE (A2CI97 ), DYTN_HUMAN (A2CJ06 ), DYTN_MOUSE (A2CI98 ), EP300_HUMAN (Q09472 ), EP300_MOUSE (B2RWS6 ), HAC12_ARATH (Q9FWQ5 ), HAC1_ARATH (Q9C5X9 ), HAC2_ARATH (Q9FYH1 ), HAC4_ARATH (Q9LG11 ), HAC5_ARATH (Q9LE42 ), HACL1_ORYSJ (Q6YXY2 ), HACL2_ORYSJ (Q5Z8V7 ), HACL3_ORYSJ (Q9XHY7 ), HERC2_HUMAN (O95714 ), HERC2_MOUSE (Q4U2R1 ), KCMF1_BOVIN (Q1LZE1 ), KCMF1_DANRE (Q7T321 ), KCMF1_DROME (Q95RX5 ), KCMF1_HUMAN (Q9P0J7 ), KCMF1_MOUSE (Q80UY2 ), KCMF1_XENLA (Q6GPB6 ), MIB1_DANRE (Q804S5 ), MIB1_HUMAN (Q86YT6 ), MIB1_MOUSE (Q80SY4 ), MIB1_XENLA (Q6GNY1 ), MIB2_CHICK (Q5ZIJ9 ), MIB2_HUMAN (Q96AX9 ), MIB2_MOUSE (Q8R516 ), MIB2_RAT (Q68LP1 ), MIB_DROME (Q9VUX2 ), NBR1_HUMAN (Q14596 ), NBR1_MOUSE (P97432 ), NBR1_PONAB (Q5RC94 ), NBR1_RAT (Q501R9 ), PRT1_ARATH (Q8LBL5 ), REF2P_DROME (P14199 ), REF2P_DROSI (Q24629 ), SQSTM_HUMAN (Q13501 ), SQSTM_MOUSE (Q64337 ), SQSTM_PONAB (Q5RBA5 ), SQSTM_RAT (O08623 ), SWI3D_ARATH (Q8VY05 ), TAD2A_ARATH (Q9SFD5 ), TAD2B_ARATH (Q9ATB4 ), TAD2B_DANRE (Q503N9 ), TAD2B_DROME (Q8I8V0 ), TAD2B_HUMAN (Q86TJ2 ), TAD2B_PONAB (Q5RBN9 ), TAD2B_XENLA (Q6NRB5 ), TADA2_ORYSJ (Q75LL6 ), UTRO_HUMAN (P46939 ), VER2_CAEEL (O76695 ), Y3893_DICDI (Q54QG5 ), YN8B_SCHPO (Q9P792 ), YOY6_CAEEL (P34664 ), ZSWM2_HUMAN (Q8NEG5 ), ZSWM2_MOUSE (Q9D9X6 ), ZZEF1_HUMAN (O43149 ), ZZEF1_MOUSE (Q5SSH7 ), ZZZ3_HUMAN (Q8IYH5 ), ZZZ3_MOUSE (Q6KAQ7 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
6 sequences
DMD_CAEEL (Q9TW65 ), JOKA2_SOLTU (M1BJF6 ), NBR1_ARATH (Q9SB64 ), RSC8_YEAST (P43609 ), SSR2_SCHPO (O14470 ), TAD2A_DROME (Q7KSD8 )» more |
| UniProtKB/Swiss-Prot 'Unknown' sequences |
1 sequence
TF2H2_CAEEL (P34567 ) |
| PDB [Detailed view] |
25 PDB
1TOT; 2DIP; 2E5R; 2FC7; 2N1A; 4XI6; 4XI7; 4XIB; 5U7G; 5YP7; 5YP8; 5YPA; 5YPB; 5YPC; 5YPE; 5YPF; 5YPG; 5YPH; 6CW2; 6CW3; 6DS6; 6E83; 6E86; 6KHZ; 6MJ7 » more |
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