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Entry: PS01360 |
Entry name [info] | ZF_MYND_1 |
Accession [info] | PS01360 |
Entry type [info] | PATTERN |
Date [info] |
01-JAN-2003 CREATED;
01-JAN-2003 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC50865 |
Description [info] | Zinc finger MYND-type signature. |
Pattern [info] |
[CH]-x(2,4)-C-x(7,17)-C-x(0,2)-C-x(4)-[YFT]-C-x(3)-[CH]-x(6,9)-H- x(3,4)-C. |
Total number of hits | 100 in 100 different sequences |
Number of true positive hits | 96 in 96 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 4 in 4 different sequences |
Number of false negative sequences | 8 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 96.00 % |
Recall (true positives / (true positives + false negatives)) | 92.31 % |
Taxonomic range [info] | Eukaryotes, Eukaryotic viruses |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
96 sequences
ANKY1_HUMAN (Q9P2S6 ), ANKY2_BOVIN (Q0VCS9 ), ANKY2_CHICK (Q5ZMD2 ), ANKY2_HUMAN (Q8IV38 ), ANKY2_MOUSE (Q3TPE9 ), ANMY1_MOUSE (Q8C0W1 ), ASHR1_ARATH (Q7XJS0 ), DEAF1_DROME (Q24180 ), DEAF1_HUMAN (O75398 ), DEAF1_MOUSE (Q9Z1T5 ), DEAF1_PANTR (O77562 ), DEAF1_RAT (O88450 ), EGL9_CAEEL (G5EBV0 ), EGLN1_HUMAN (Q9GZT9 ), EGLN1_MOUSE (Q91YE3 ), FB342_ARATH (Q9FK27 ), GACZ_DICDI (Q55DW9 ), MSS51_HUMAN (Q4VC12 ), MSS51_MOUSE (Q9D5Z5 ), MSS51_RAT (D3ZKV9 ), MTG16_CHICK (Q5F3B1 ), MTG16_HUMAN (O75081 ), MTG16_MOUSE (O54972 ), MTG8R_HUMAN (O43439 ), MTG8R_MOUSE (O70374 ), MTG8R_XENLA (Q9IAB2 ), MTG8_HUMAN (Q06455 ), MTG8_MOUSE (Q61909 ), MUB1_ASPCL (A1CBG9 ), MUB1_ASPFC (B0Y1D1 ), MUB1_ASPFN (B8NKS1 ), MUB1_ASPFU (Q4WVI6 ), MUB1_ASPNC (A2RA63 ), MUB1_ASPOR (Q2U685 ), MUB1_ASPTN (Q0CW83 ), MUB1_EMENI (O42631 ), MUB1_NEOFI (A1DDX0 ), MUB1_SCHPO (P87311 ), MUB1_YEAST (Q03162 ), PDCD2_BOVIN (Q2YDC9 ), PDCD2_HUMAN (Q16342 ), PDCD2_MOUSE (P46718 ), PDCD2_RAT (P47816 ), PKCB1_HUMAN (Q9ULU4 ), SET14_CAEEL (Q09415 ), SET6_SCHPO (O94256 ), SMY2A_DANRE (Q5BJI7 ), SMY2A_XENLA (Q7ZXV5 ), SMY2B_DANRE (Q5RGL7 ), SMY2B_XENLA (Q6GN68 ), SMYD1_HUMAN (Q8NB12 ), SMYD1_MOUSE (P97443 ), SMYD2_BOVIN (Q0P585 ), SMYD2_CHICK (E1C5V0 ), SMYD2_HUMAN (Q9NRG4 ), SMYD2_MOUSE (Q8R5A0 ), SMYD2_PIG (C3RZA1 ), SMYD2_RAT (Q7M6Z3 ), SMYD3_HUMAN (Q9H7B4 ), SMYD3_MOUSE (Q9CWR2 ), SMYD4_CHICK (Q5F3V0 ), SMYD4_HUMAN (Q8IYR2 ), SMYD4_MOUSE (Q8BTK5 ), SMYD4_PONAB (Q5R5X9 ), TDRD1_DANRE (Q58EK5 ), TDRD1_HUMAN (Q9BXT4 ), TDRD1_MOUSE (Q99MV1 ), TDRD1_ORYLA (A9CPT4 ), UBP15_ARATH (Q9FPS9 ), UBP16_ARATH (Q9SB51 ), UBP17_ARATH (Q9FKP5 ), UBP18_ARATH (Q67XW5 ), UBP19_ARATH (Q9SJA1 ), UBP19_HUMAN (O94966 ), UBP19_MOUSE (Q3UJD6 ), UBP19_RAT (Q6J1Y9 ), Y2140_DICDI (Q54DL6 ), Y2454_DICDI (Q54D67 ), Y3589_DICDI (Q557F7 ), Y3591_DICDI (Q557F6 ), Y4059_DICDI (Q54Q80 ), Y7331_DICDI (Q54ZX8 ), Y8495_DICDI (Q54IV4 ), YR331_MIMIV (Q5UQS2 ), ZMY10_DANRE (F1QN74 ), ZMY10_DROME (Q9VU41 ), ZMY10_HUMAN (O75800 ), ZMY10_MOUSE (Q99ML0 ), ZMY10_RAT (Q6AXZ5 ), ZMY10_XENLA (Q5FWU8 ), ZMY11_HUMAN (Q15326 ), ZMY11_MOUSE (Q8R5C8 ), ZMY12_HUMAN (Q9H0C1 ), ZMY19_HUMAN (Q96E35 ), ZMY19_MOUSE (Q9CQG3 ), ZMY19_RAT (Q7TSV3 )» more
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UniProtKB/Swiss-Prot False negative sequences |
8 sequences
ATXR2_ARATH (Q5PP37 ), BIG_ARATH (Q9SRU2 ), BIG_ORYSJ (B9G2A8 ), SMYD5_CHICK (Q5ZIZ2 ), SMYD5_HUMAN (Q6GMV2 ), SMYD5_MOUSE (Q3TYX3 ), SMYD5_XENLA (Q6GPQ4 ), ZMY15_HUMAN (Q9H091 )» more |
UniProtKB/Swiss-Prot False positive sequences |
4 sequences
FB76_ARATH (Q9FYF9 ), SET5_CRYNB (P0CR43 ), SET5_CRYNJ (P0CR42 ), VE5_RHPV1 (P24834 )» more |
PDB [Detailed view] |
57 PDB
2D8Q; 2DAN; 2DJ8; 2JW6; 2OD1; 2ODD; 3MEK; 3N71; 3OXF; 3OXG; 3OXL; 3PDN; 3QWP; 3QWV; 3QWW; 3RIB; 3RU0; 3S7B; 3S7D; 3S7F; 3S7J; 3TG4; 3TG5; 4A24; 4O6F; 4WUY; 4YND; 5ARF; 5ARG; 5CCM; 5EX0; 5EX3; 5HDA; 5HI7; 5HQ8; 5KJK; 5KJL; 5KJM; 5KJN; 5MQ4; 5V37; 5V3H; 5WCG; 5XXD; 5XXG; 5XXJ; 5YJO; 6CBX; 6CBY; 6IJL; 6MON; 6N3G; 6O9O; 6P6G; 6P6K; 6P7Z; 6PAF » more |