PROSITE entry PS50043
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General information about the entry
| Entry name [info] | HTH_LUXR_2 |
| Accession [info] | PS50043 |
| Entry type [info] | MATRIX |
| Date [info] |
01-MAR-2005 CREATED;
10-MAY-2017 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00542 |
| Associated ProRule [info] | PRU00411 |
Name and characterization of the entry
| Description [info] | LuxR-type HTH domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=65; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=60; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.6732509; R2=0.0293710; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=3084.8750000; R2=1.6477273; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=291; H_SCORE=3564; N_SCORE=11.2; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=131; H_SCORE=3301; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: B1=*; E1=*; MM=*; II=*; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=-85; E0=*; BD=-55; /M: SY='H'; M= -6,-42, 7, 13,-45,-13, 17, -4, 0,-11,-33, 5, 11,-19, -8, 1, -1, 4,-44, -4; M0=-5; /I: MM=-58; MI=0; MD=-116; IM=0; II=-83; DM=-7; DD=-14; /M: SY='N'; M= 1, 6, 7, 7, -8,-15,-23,-13, 7,-42,-33, 14,-38, 8, 4, 8, 2, -4,-44, -4; M0=-7; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='P'; M= 4,-42, 12, -2,-45, 0, 4,-43, -2, -2,-33, -7, 13, 4, 8, 9, -2,-38,-44,-37; M0=-8; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Q'; M= 1,-38, 7,-22, 6,-15,-25,-13, -1, 10,-30, 7, 8, 12,-26, -1, 4,-14, 8,-35; M0=-5; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='P'; M= 8,-42, 10, 2, -6,-14, 0,-11, -1, -9,-33, 5, 12, 9, 1, -1,-26, 4,-44,-37; M0=-5; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='C'; M= -1, 14, -2,-13,-32,-42, 3, -3,-29, 0, 11,-32, -2, 2, 9, 11, 8, 5, 10, -3; M0=-6; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='L'; M=-63,-56,-86,-80, 9,-85,-71, -9,-79, 32,-23,-83,-74,-65,-73,-80,-61,-11,-54,-57; M0=-51; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='T'; M=-38,-45, -9,-52,-70,-46,-57,-69,-62,-71,-62,-48,-54,-56,-64, 26, 32,-56,-72,-69; M0=-44; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='P'; M= 2,-42, -1, 3,-45, -6, 16,-43, 6,-42,-33, 1, 23, 5, 14,-13, -9,-12,-44,-37; M0=-11; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M=-55,-61,-67,-48,-71,-59,-37,-62, 14,-58,-52, -6,-58, 3, 37,-54, 8,-61,-56,-56; M0=-40; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M=-62,-72,-38, 38,-79,-57,-53,-82,-56,-79,-75,-46,-63, 16,-62,-58,-63,-77,-74,-70; M0=-55; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M=-11, 19,-39, -3, -4,-42, 3, 3, 5, 0, 2,-34,-43, -6, 25, 1, -3, -9, 8,-31; M0=-9; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= -5,-42, 7, 25,-45,-37, 4,-11, 1, -4,-33, -4,-38, 20,-24, -5, -1,-38,-44,-37; M0=-12; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='V'; M=-47, 24,-73,-69,-46,-69,-64, 25,-67, -7, 3,-66,-67,-65,-67,-62,-46, 28,-60, -3; M0=-41; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='L'; M= -2,-53,-83,-77, -7,-79,-66, -9,-74, 30, 17,-76,-71,-63,-69,-72,-57, -4,-53,-55; M0=-43; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Q'; M= -6, 2,-26, 9, 0, -1, 10,-42, 8,-18,-33, 1,-38, 19, 18, 2,-10,-13,-44,-37; M0=-9; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='W'; M= -6, 7,-52, -5, -5,-45,-34,-23, -5, 19, 30,-41,-46,-38,-11,-36,-29,-22, 39, -4; M0=-18; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M= -1, 14,-53,-47, -5,-45,-34, 21,-43, 12, 11,-42,-46,-39,-41,-36, 6, 15, 20,-29; M0=-20; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='A'; M= 25, 3,-47,-13,-28,-16,-33, -8,-12, -2, 12,-39,-45,-36, -3, 6, -2, -3,-33, -4; M0=-11; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Q'; M= 0,-42, 15, 15,-45,-37,-23, -5, 8,-42,-33, 14,-38, 16, -7, 5,-10,-12,-44,-37; M0=-12; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='G'; M=-46, 5, -9,-34,-72, 37,-46,-72,-51,-71,-65, -5,-54, -4,-59,-45,-48,-63,-73,-64; M0=-42; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='M'; M= -7, 5,-50, -5, 3,-45, 12,-23, 23, 10, 23,-40,-45,-37,-11,-35,-29, -8, 8, 12; M0=-15; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='T'; M=-13,-41, 5,-20,-44,-37, 4,-42, 0, -9, 0, -4, -2,-19,-24, 21, 24,-38,-43,-37; M0=-14; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='N'; M= 4,-36, -8, -8,-37,-39,-26,-33,-24,-15, 11, 31,-40,-23,-28, 5, 8, 1,-39, 5; M0=-13; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='K'; M=-27,-42,-26, 9,-45, -7,-23, -2, 25,-19,-33, 6,-38, 4, -1, 2, -1,-12, 16, -6; M0=-10; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= 0,-42, 13, 25,-45,-15,-23,-43,-19,-20, -1, -4,-38, 23,-24, -4,-27,-13,-44,-37; M0=-14; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M=-49,-44,-76,-73,-50,-74,-75, 39,-72,-37, 2,-71,-71,-72,-74,-68, -1, 0,-68,-63; M0=-49; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='A'; M= 32, 7,-70,-73,-68, 3,-62,-66,-69,-17,-59,-53,-53,-63,-65, 7, -9,-54,-71,-70; M0=-38; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='D'; M= 11, 2, 14, 7,-45,-14,-23,-14, 4,-42,-33, 2,-38, -5, 13, 1, -2, -1,-44, 4; M0=-8; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M= 3,-42, -9, 6, -9,-37,-23, 16, 11, -9,-33, 1,-38, 3, 11, 3, -7, -5,-43,-37; M0=-7; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='L'; M=-14, 3,-60,-12,-32,-51,-42,-27,-51, 29, 23,-49,-52,-46,-48,-42, -2,-28,-40,-37; M0=-28; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='G'; M=-13, 14, 10,-20, 15, 19, 10,-42, 1,-42,-33, 13,-38, 5, -9, 5,-26,-38,-44,-37; M0=-13; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M=-44, 13,-69,-64,-43,-64,-57, 33,-62, 8,-32,-61,-63,-60, 5,-56,-12, 10,-54,-50; M0=-34; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='S'; M= 0, 3,-36,-31,-53,-14, 3,-50, 0,-50,-41, 2,-44,-30,-35, 32, 2,-44,-52,-47; M0=-23; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= 1,-42,-26, 23,-45,-13, 2, 2, -7,-10,-32, 6, 8, -2, -1,-26, 3,-12,-43, 6; M0=-7; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='K'; M=-13,-42, -1, -7,-45, -6,-23,-13, 23,-42,-33, 6,-38, 5, 21, 3, -2,-14,-44,-37; M0=-12; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='T'; M= -4,-43,-56,-59,-69,-45,-59,-67,-63,-70,-60, 0,-53, -5,-62, -4, 38,-55,-71,-70; M0=-41; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='V'; M=-49,-44,-76,-72, -5,-74,-73, 14,-72, -6,-36,-70,-71,-71,-73,-68,-10, 35,-66,-62; M0=-44; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='K'; M=-27,-42,-26, 6,-45,-37, 1,-43, 24,-42,-33, 14,-38, 13, 9, 7,-11,-38,-44, 7; M0=-17; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='T'; M= 0, 7,-52,-46, 13,-45, 2, 0,-12,-13,-20, 12,-46,-38, -9, 1, 17, 9, 9, 14; M0=-12; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='H'; M=-38,-39,-49,-42,-35,-50, 46,-35, -8,-15,-31,-40,-50, 4,-30,-14,-37, 3,-39, 25; M0=-25; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='K'; M=-30,-29,-52,-45,-28,-45, 8, 13, 17, 14, 10,-41,-46,-38, 16,-13,-30, 8,-33,-30; M0=-18; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= 0,-42, -8, -9, 3, 0, 4,-42, 9, -5,-33, 5,-38,-19, 18, 6, 10,-38,-44, 4; M0=-8; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='N'; M=-13,-42, -7, -7,-45,-37, 19,-43, 0,-42,-33, 33,-38, -5, 8, 8,-27,-13,-44,-37; M0=-17; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M= 9,-38,-67,-61,-40,-61,-52, 27,-58, 15, 0,-57,-60,-55,-57,-16,-41, 12,-49,-46; M0=-30; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='M'; M=-30,-28,-51,-45, 14,-45,-34,-23, -2, 7, 37,-41,-46, 10, 9,-36,-11, -9,-33, 17; M0=-18; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= 6,-42, -1, 3,-45, -5,-23,-43, 12,-20, 19, -6,-38, 14, 22,-11,-26,-38,-44, -2; M0=-12; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='K'; M=-55,-60,-68,-49,-71,-59,-37,-10, 39,-58,-52,-46,-58,-33, 2,-54,-12,-60,-56,-56; M0=-42; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='L'; M=-62,-56,-86,-80, 8,-84,-69, 4,-78, 29, 20,-81,-73,-64,-72,-78, 2,-39,-54,-56; M0=-48; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='N'; M= -6,-42, 11, 2,-45, 19, 12,-43, 11,-42,-33, 21,-38,-19, -1,-11, -8,-38,-44,-37; M0=-15; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='V'; M= 12, 4,-58,-52,-32,-50,-40, -7,-48, 7,-24,-47,-50,-44,-46,-16, 4, 29,-38,-35; M0=-24; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='H'; M= 4,-42, -8, -7,-45, 0, 16,-13, 16,-42, -2, -7,-12,-19, 12, 7, 9, 0,-44,-37; M0=-8; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='N'; M=-38,-53, -9,-27,-58,-15, 1,-56,-32,-55,-46, 32,-47,-30, 2, 23, -1,-51,-57,-49; M0=-27; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M=-27,-40, 8, -7,-42,-15,-24,-10, 8, 2, 2,-24,-38,-20, 30,-12, -1,-12,-42,-36; M0=-12; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='V'; M= 9, 3,-50,-44, 4,-45,-33, -1,-41,-27, 1, -7, 5, 9, -3, 1, 16, 16,-33, -5; M0=-12; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Q'; M= -5,-42, 11, 18,-45,-13, 16,-42,-19,-11, -1,-23,-38, 30,-24,-10,-27, -4,-43,-37; M0=-14; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='A'; M= 22,-29,-54,-47, -4,-46,-34, 2,-43, 21, 3,-42, -9, -6,-41,-15,-30,-23,-33,-30; M0=-20; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='V'; M= 8,-28,-53,-47, 3,-13,-34, 16,-43, 2,-20,-42,-46,-39,-41,-15, 3, 24,-33, 6; M0=-16; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= 11,-42, -1, -8,-45,-37, 4, 1, 4, 3, -1, 2,-38, -4, 11, -1, 4, 6,-43,-37; M0=-7; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='M'; M=-12,-29,-46, 5, -7,-13, 11, 0, 8, 8, 19,-38,-45,-35, 4, -5,-10, -2, 17, 18; M0=-8; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='A'; M= 26,-28,-52,-46, 2, 0, 0, -6,-42, 1, 2,-41, -9, -5,-40, 0,-11, -1,-33,-29; M0=-13; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M= 0,-41, -8, -2, 1,-14, 11, 14, 4, 4,-32, 0, -9, 3, 7,-11,-27, 6, 6,-37; M0=-4; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= 2,-42, 8, -1,-45,-13,-23, 3, -1, -9, -2, 0,-38, 8, 22, 4, -1,-12,-44,-37; M0=-7; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='N'; M=-27, 5, 0, -9,-44, -6, 10, 1, -6, 6, 13, 15,-12, 3, 6, 4, -1,-13,-43, -4; M0=-5; /I: MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='G'; M=-13,-40, 0,-21, -8, 23,-24,-40, 0, 2,-31, 13,-38,-20, 8, -5,-27,-36, 7, 7; M0=-11; /I: B0=*; E1=-10;» more |
Numerical results [info]
| Total number of hits | 260 in 260 different sequences |
| Number of true positive hits | 260 in 260 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 99.62 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | window20 |
| Author [info] | PS_Langendijk_Genevaux |
| Feature key [info] | DOMAIN |
| Feature description [info] | HTH luxR-type |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
260 sequences
AGMR_PSEAE (P29369), AGMR_PSEPU (A8R3T0), AHYR_AERHY (P0A3J5), ALKS_ALCBS (Q0VKZ4), ALKS_PSEOL (P17051), ALKS_PSEPU (Q9L4M7), ANOR_ACINO (A0A0N8YGA2), ASAR_AERSA (P0A3J6), BGLJ_ECOLI (P39404), BJAR1_BRADU (Q89VI3), BRPA_STRHY (Q01108), BVGA_BORBR (P0A4H3), BVGA_BORPA (P0A4H4), BVGA_BORPE (P0A4H2), CARR_PECCC (Q46751), CMPA_BACSU (P14204), CSGD_ECOLI (P52106), CSGD_SALTY (O54294), DCTR_ECO57 (Q8X5P3), DCTR_ECOL6 (Q8FCK2), DCTR_ECOLI (P37195), DCTR_RHOCA (P37740), DCTR_SHIFL (Q83J60), DEGU_BACSU (P13800), DEGU_BREBE (P54662), DESR_BACSU (O34723), DEVR_MYCTO (P9WMF8), DEVR_MYCTU (P9WMF9), ECHR_DICCH (Q46967), ECNR_CITFR (O69280), ECPR_ECO24 (A7ZI28), ECPR_ECO27 (B7UJE2), ECPR_ECO55 (B7L425), ECPR_ECO57 (Q8X6I1), ECPR_ECO5E (B5Z1N3), ECPR_ECO81 (B7MP71), ECPR_ECODH (B1XE36), ECPR_ECOHS (A7ZWT2), ECPR_ECOK1 (A1A7X7), ECPR_ECOKI (Q9AME2), ECPR_ECOL5 (Q0TKZ0), ECPR_ECOL6 (Q8FKL2), ECPR_ECOLC (B1J0X8), ECPR_ECOLI (P71301), ECPR_ECOLU (B7N8J2), ECPR_ECOSE (B6I082), ECPR_ECOSM (B1LHW0), ECPR_ECOUT (Q1RFQ3), ECPR_KLEP3 (B5Y159), ECPR_KLEP7 (A6T571), ECPR_SHIBS (Q325R5), ESAR_PANSE (P54293), EVGA_ECO57 (P0ACZ6), EVGA_ECOL6 (P0ACZ5), EVGA_ECOLI (P0ACZ4), EVGA_SHIFL (P0ACZ7), EXAE_PSEPU (A8R3S7), EXPR_DICD3 (Q47188), EXPR_PECPM (Q47189), FIMW_SALTY (P37928), FIMZ_ECO57 (P0AEL9), FIMZ_ECOLI (P0AEL8), FIMZ_SALTY (P26319), FIXJ_AZOC5 (P26487), FIXJ_BRADU (P23221), FIXJ_RHIME (P10958), GACA_PSEAE (Q51373), GACA_PSEPH (P32967), GACA_PSEU2 (Q52376), GACA_PSEVI (P95582), GADE_ECO57 (P63206), GADE_ECOL6 (P63205), GADE_ECOLI (P63204), GADE_SHIFL (P63207), GERE_BACSU (P11470), LASR_PSEAE (P25084), LIAR_BACSU (O32197), LNRK_BACSU (P94439), LUXR_ALIFS (P12746), LUXS_ALIF1 (P35327), LVHTH_ERYLH (Q2NB98), MALT_CITK8 (A8AQX2), MALT_CROS8 (A7ME76), MALT_ECO24 (A7ZSU8), MALT_ECO27 (B7UKC3), MALT_ECO45 (B7MDP4), MALT_ECO55 (B7L4U8), MALT_ECO57 (Q8X701), MALT_ECO5E (B5YTW9), MALT_ECO7I (B7NMI3), MALT_ECO81 (B7N1J6), MALT_ECO8A (B7M2H9), MALT_ECOBW (C4ZVX0), MALT_ECODH (B1X764), MALT_ECOHS (A8A5M7), MALT_ECOK1 (A1AGU2), MALT_ECOL5 (Q0TC49), MALT_ECOL6 (Q8CXX5), MALT_ECOLC (B1IP47), MALT_ECOLI (P06993), MALT_ECOLU (B7NE23), MALT_ECOSE (B6I2Y2), MALT_ECOSM (B1LI79), MALT_ECOUT (Q1R5L6), MALT_ENT38 (A4WFK6), MALT_ESCF3 (B7LSC1), MALT_KLEP3 (B5XTR7), MALT_KLEP7 (A6TF41), MALT_PHOLL (Q7N976), MALT_SALA4 (B5F8N2), MALT_SALAR (A9MMA9), MALT_SALCH (Q57IV9), MALT_SALDC (B5FKD6), MALT_SALEP (B5R375), MALT_SALG2 (B5R7J9), MALT_SALHS (B4TKU2), MALT_SALNS (B4SVL9), MALT_SALPA (Q5PM00), MALT_SALPB (A9MTT7), MALT_SALPK (B5BHH3), MALT_SALSV (B4TY75), MALT_SALTI (Q8Z227), MALT_SALTY (Q8ZLI3), MALT_SERP5 (A8GKU0), MALT_SHIBS (Q31VL4), MALT_SHIF8 (Q0SZP7), MALT_SHISS (Q3YWK7), MALT_VIBC1 (A7N5N6), MALT_VIBCH (Q9KNF3), MALT_VIBPA (Q87FQ5), MALT_VIBVU (Q8D4P3), MALT_VIBVY (Q7MG94), MALT_YERE8 (A1JSF2), MALT_YERP3 (A7FNW4), MALT_YERPA (Q1C2L4), MALT_YERPB (B2K5W2), MALT_YERPE (Q8ZJI2), MALT_YERPP (A4TGR4), MALT_YERPS (Q664J3), MALT_YERPY (B1JHZ0), MCTR_RHIJ3 (Q1M7A0), MOAR_KLEAE (P54794), MOXX_PARDE (P29904), NARL_ECO57 (P0AF30), NARL_ECOL6 (P0AF29), NARL_ECOLI (P0AF28), NARL_MYCTO (P9WGM4), NARL_MYCTU (P9WGM5), NARL_SHIFL (P0AF31), NARP_ECOLI (P31802), NARP_HAEIN (P44845), NODW_BRADU (P15940), NREC_STAA1 (A7X623), NREC_STAA2 (A6U4C0), NREC_STAA3 (Q2FEA6), NREC_STAA8 (Q2FVM7), NREC_STAA9 (A5IVH2), NREC_STAAB (Q2YZ42), NREC_STAAC (Q5HDG5), NREC_STAAE (A6QJN1), NREC_STAAM (Q99RN8), NREC_STAAN (Q7A3U5), NREC_STAAR (Q6GE42), NREC_STAAS (Q6G6T0), NREC_STAAT (A8Z580), NREC_STAAW (Q7A029), NREC_STACT (Q7WZY4), NREC_STAEQ (Q5HLK6), NREC_STAES (Q8CN75), NREC_STAHJ (Q4L8Q6), PDEL_ECOLI (P21514), PHZR_PSECL (P54303), PHZR_PSEFL (Q51786), PPRB_PSEAE (Q9HWA4), RAIR_RHIET (O54452), RAMA_CORGL (Q8NML3), RAMR_STRCO (Q7AKE4), RCSA_ECO57 (P69406), RCSA_ECOLI (P0DMC9), RCSA_ECOLX (P0DMD0), RCSA_ERWAM (P20098), RCSA_KLEAE (P05338), RCSA_PANSE (P27488), RCSA_SALTI (Q56083), RCSA_SALTY (P54698), RCSB_ECO57 (P69409), RCSB_ECOL6 (P69408), RCSB_ECOLI (P0DMC7), RCSB_ECOLX (P0DMC8), RCSB_SALTI (Q56127), RCSB_SALTY (P58663), RCSB_SHIFL (P69410), RHIR_RHILV (Q03316), RHLR_PSEAE (P54292), RPAR_RHOPA (Q6NCZ5), RRE1_SYNY3 (P72781), SDIA_ECOLI (P07026), SGAR_HYPME (P56644), SOLR_RALN1 (P58590), SOLR_RALSL (O30919), SSRB_SALTY (Q7CQM5), TDIR_THAAR (O87940), THAA_BURTA (Q2T4M4), TMOT_PSEME (Q8KR08), TODT_PSEP1 (A5W4E2), TODT_PSEPT (I7CA98), TODT_PSEPU (Q3LWR6), TRAR_AGRFC (P54294), TRAR_AGRVI (P33909), TRAR_RHIRD (P33905), TRAR_SINFN (P55407), TRPO_PSEAE (P24908), TTRR_SALTY (Q7CQM8), UHPA_ECO57 (P0AGA8), UHPA_ECOL6 (P0AGA7), UHPA_ECOLI (P0AGA6), UHPA_SALTY (P27667), UHPA_SHIFL (P0AGA9), UVRY_ECO57 (P66798), UVRY_ECOL6 (P66797), UVRY_ECOLI (P0AED5), UVRY_SHIFL (P0AED6), VANR_VIBAN (P74946), VJBR_BRUA2 (Q2YJ50), VJBR_BRUAB (Q579W9), VJBR_BRUME (Q8YAY5), VJBR_BRUO2 (A5VTN1), VJBR_BRUSU (Q8FXF9), VRAR_STAA1 (P0C0Z1), VRAR_STAA8 (Q2FX09), VRAR_STAAC (Q5HEP0), VRAR_STAAM (Q7A2Q1), VRAR_STAAN (Q7A4R9), VRAR_STAAR (Q6GFH3), VRAR_STAAS (Q6G850), VRAR_STAAW (Q7A0I0), VRAR_STAEQ (Q5HN50), VRAR_STAES (Q8CNP9), VRAR_STAHJ (Q4L7J5), VRAR_STAS1 (Q49YS9), Y4QH_SINFN (P55629), Y890_MYCTO (P9WMG0), Y890_MYCTU (P9WMG1), Y914_MYCBO (P59969), YCF29_CYAPA (P48359), YCF29_GUITH (O78417), YCF29_NEOYE (Q1XDE4), YCF29_PORPU (P51343), YDFI_BACSU (P96686), YENR_YEREN (P54295), YEXN_AERSA (P45785), YGEK_ECO57 (P58664), YGEK_ECOLI (Q46791), YHCZ_BACSU (O07528), YHJB_ECOLI (P37640), YJJQ_ECO57 (P0ADD8), YJJQ_ECOLI (P0ADD7), YUKR_YERRU (O87971), YVFU_BACSU (O07019), YXJL_BACSU (P55184)» more
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| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
YUAB_ECOLI (Q9JMT8) |
| PDB [Detailed view] |
52 PDB
1A04; 1FSE; 1H0M; 1JE8; 1L3L; 1RNL; 1X3U; 1ZG1; 1ZG5; 1ZLJ; 1ZLK; 2KRF; 2Q0O; 2RNJ; 3C3W; 3C57; 3P7N; 3ULQ; 4GVP; 4IF4; 4LDZ; 4LFU; 4LGW; 5F64; 5O8Y; 5O8Z; 5VXN; 5W43; 6EO2; 6EO3; 6MWH; 6MWL; 6MWW; 6MWZ; 6V7W; 6V7X; 6ZIX; 6ZJ2; 7PK5; 7R3E; 7R3G; 7R3H; 7R3I; 7R3J; 7VE5; 7VE6; 8A5R; 8A5S; 8B4A; 8DQ0; 8DQ1; 8U3B » more |