Home  |  Contact
Entry: PS50043

General information about the entry

Entry name [info] HTH_LUXR_2
Accession [info] PS50043
Entry type [info] MATRIX
Date [info] 01-MAR-2005 CREATED;
10-MAY-2017 DATA UPDATE;
13-FEB-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00542
Associated ProRule [info] PRU00411

Name and characterization of the entry

Description [info] LuxR-type HTH domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=65;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=60;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.6732509; R2=0.0293710; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=3084.8750000; R2=1.6477273; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=291; H_SCORE=3564; N_SCORE=11.2; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=131; H_SCORE=3301; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: B1=*; E1=*; MM=*; II=*;
...
                A   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y
/I:         B1=-85; E0=*; BD=-55;
/M: SY='H';  M= -6,-42,  7, 13,-45,-13, 17, -4,  0,-11,-33,  5, 11,-19, -8,  1, -1,  4,-44, -4; M0=-5;
/I:         MM=-58; MI=0; MD=-116; IM=0; II=-83; DM=-7; DD=-14;
/M: SY='N';  M=  1,  6,  7,  7, -8,-15,-23,-13,  7,-42,-33, 14,-38,  8,  4,  8,  2, -4,-44, -4; M0=-7;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='P';  M=  4,-42, 12, -2,-45,  0,  4,-43, -2, -2,-33, -7, 13,  4,  8,  9, -2,-38,-44,-37; M0=-8;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Q';  M=  1,-38,  7,-22,  6,-15,-25,-13, -1, 10,-30,  7,  8, 12,-26, -1,  4,-14,  8,-35; M0=-5;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='P';  M=  8,-42, 10,  2, -6,-14,  0,-11, -1, -9,-33,  5, 12,  9,  1, -1,-26,  4,-44,-37; M0=-5;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='C';  M= -1, 14, -2,-13,-32,-42,  3, -3,-29,  0, 11,-32, -2,  2,  9, 11,  8,  5, 10, -3; M0=-6;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='L';  M=-63,-56,-86,-80,  9,-85,-71, -9,-79, 32,-23,-83,-74,-65,-73,-80,-61,-11,-54,-57; M0=-51;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='T';  M=-38,-45, -9,-52,-70,-46,-57,-69,-62,-71,-62,-48,-54,-56,-64, 26, 32,-56,-72,-69; M0=-44;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='P';  M=  2,-42, -1,  3,-45, -6, 16,-43,  6,-42,-33,  1, 23,  5, 14,-13, -9,-12,-44,-37; M0=-11;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M=-55,-61,-67,-48,-71,-59,-37,-62, 14,-58,-52, -6,-58,  3, 37,-54,  8,-61,-56,-56; M0=-40;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M=-62,-72,-38, 38,-79,-57,-53,-82,-56,-79,-75,-46,-63, 16,-62,-58,-63,-77,-74,-70; M0=-55;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M=-11, 19,-39, -3, -4,-42,  3,  3,  5,  0,  2,-34,-43, -6, 25,  1, -3, -9,  8,-31; M0=-9;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M= -5,-42,  7, 25,-45,-37,  4,-11,  1, -4,-33, -4,-38, 20,-24, -5, -1,-38,-44,-37; M0=-12;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='V';  M=-47, 24,-73,-69,-46,-69,-64, 25,-67, -7,  3,-66,-67,-65,-67,-62,-46, 28,-60, -3; M0=-41;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='L';  M= -2,-53,-83,-77, -7,-79,-66, -9,-74, 30, 17,-76,-71,-63,-69,-72,-57, -4,-53,-55; M0=-43;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Q';  M= -6,  2,-26,  9,  0, -1, 10,-42,  8,-18,-33,  1,-38, 19, 18,  2,-10,-13,-44,-37; M0=-9;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='W';  M= -6,  7,-52, -5, -5,-45,-34,-23, -5, 19, 30,-41,-46,-38,-11,-36,-29,-22, 39, -4; M0=-18;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M= -1, 14,-53,-47, -5,-45,-34, 21,-43, 12, 11,-42,-46,-39,-41,-36,  6, 15, 20,-29; M0=-20;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='A';  M= 25,  3,-47,-13,-28,-16,-33, -8,-12, -2, 12,-39,-45,-36, -3,  6, -2, -3,-33, -4; M0=-11;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Q';  M=  0,-42, 15, 15,-45,-37,-23, -5,  8,-42,-33, 14,-38, 16, -7,  5,-10,-12,-44,-37; M0=-12;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='G';  M=-46,  5, -9,-34,-72, 37,-46,-72,-51,-71,-65, -5,-54, -4,-59,-45,-48,-63,-73,-64; M0=-42;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='M';  M= -7,  5,-50, -5,  3,-45, 12,-23, 23, 10, 23,-40,-45,-37,-11,-35,-29, -8,  8, 12; M0=-15;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='T';  M=-13,-41,  5,-20,-44,-37,  4,-42,  0, -9,  0, -4, -2,-19,-24, 21, 24,-38,-43,-37; M0=-14;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='N';  M=  4,-36, -8, -8,-37,-39,-26,-33,-24,-15, 11, 31,-40,-23,-28,  5,  8,  1,-39,  5; M0=-13;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='K';  M=-27,-42,-26,  9,-45, -7,-23, -2, 25,-19,-33,  6,-38,  4, -1,  2, -1,-12, 16, -6; M0=-10;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M=  0,-42, 13, 25,-45,-15,-23,-43,-19,-20, -1, -4,-38, 23,-24, -4,-27,-13,-44,-37; M0=-14;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M=-49,-44,-76,-73,-50,-74,-75, 39,-72,-37,  2,-71,-71,-72,-74,-68, -1,  0,-68,-63; M0=-49;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='A';  M= 32,  7,-70,-73,-68,  3,-62,-66,-69,-17,-59,-53,-53,-63,-65,  7, -9,-54,-71,-70; M0=-38;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='D';  M= 11,  2, 14,  7,-45,-14,-23,-14,  4,-42,-33,  2,-38, -5, 13,  1, -2, -1,-44,  4; M0=-8;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M=  3,-42, -9,  6, -9,-37,-23, 16, 11, -9,-33,  1,-38,  3, 11,  3, -7, -5,-43,-37; M0=-7;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='L';  M=-14,  3,-60,-12,-32,-51,-42,-27,-51, 29, 23,-49,-52,-46,-48,-42, -2,-28,-40,-37; M0=-28;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='G';  M=-13, 14, 10,-20, 15, 19, 10,-42,  1,-42,-33, 13,-38,  5, -9,  5,-26,-38,-44,-37; M0=-13;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M=-44, 13,-69,-64,-43,-64,-57, 33,-62,  8,-32,-61,-63,-60,  5,-56,-12, 10,-54,-50; M0=-34;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='S';  M=  0,  3,-36,-31,-53,-14,  3,-50,  0,-50,-41,  2,-44,-30,-35, 32,  2,-44,-52,-47; M0=-23;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M=  1,-42,-26, 23,-45,-13,  2,  2, -7,-10,-32,  6,  8, -2, -1,-26,  3,-12,-43,  6; M0=-7;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='K';  M=-13,-42, -1, -7,-45, -6,-23,-13, 23,-42,-33,  6,-38,  5, 21,  3, -2,-14,-44,-37; M0=-12;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='T';  M= -4,-43,-56,-59,-69,-45,-59,-67,-63,-70,-60,  0,-53, -5,-62, -4, 38,-55,-71,-70; M0=-41;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='V';  M=-49,-44,-76,-72, -5,-74,-73, 14,-72, -6,-36,-70,-71,-71,-73,-68,-10, 35,-66,-62; M0=-44;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='K';  M=-27,-42,-26,  6,-45,-37,  1,-43, 24,-42,-33, 14,-38, 13,  9,  7,-11,-38,-44,  7; M0=-17;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='T';  M=  0,  7,-52,-46, 13,-45,  2,  0,-12,-13,-20, 12,-46,-38, -9,  1, 17,  9,  9, 14; M0=-12;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='H';  M=-38,-39,-49,-42,-35,-50, 46,-35, -8,-15,-31,-40,-50,  4,-30,-14,-37,  3,-39, 25; M0=-25;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='K';  M=-30,-29,-52,-45,-28,-45,  8, 13, 17, 14, 10,-41,-46,-38, 16,-13,-30,  8,-33,-30; M0=-18;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M=  0,-42, -8, -9,  3,  0,  4,-42,  9, -5,-33,  5,-38,-19, 18,  6, 10,-38,-44,  4; M0=-8;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='N';  M=-13,-42, -7, -7,-45,-37, 19,-43,  0,-42,-33, 33,-38, -5,  8,  8,-27,-13,-44,-37; M0=-17;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M=  9,-38,-67,-61,-40,-61,-52, 27,-58, 15,  0,-57,-60,-55,-57,-16,-41, 12,-49,-46; M0=-30;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='M';  M=-30,-28,-51,-45, 14,-45,-34,-23, -2,  7, 37,-41,-46, 10,  9,-36,-11, -9,-33, 17; M0=-18;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M=  6,-42, -1,  3,-45, -5,-23,-43, 12,-20, 19, -6,-38, 14, 22,-11,-26,-38,-44, -2; M0=-12;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='K';  M=-55,-60,-68,-49,-71,-59,-37,-10, 39,-58,-52,-46,-58,-33,  2,-54,-12,-60,-56,-56; M0=-42;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='L';  M=-62,-56,-86,-80,  8,-84,-69,  4,-78, 29, 20,-81,-73,-64,-72,-78,  2,-39,-54,-56; M0=-48;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='N';  M= -6,-42, 11,  2,-45, 19, 12,-43, 11,-42,-33, 21,-38,-19, -1,-11, -8,-38,-44,-37; M0=-15;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='V';  M= 12,  4,-58,-52,-32,-50,-40, -7,-48,  7,-24,-47,-50,-44,-46,-16,  4, 29,-38,-35; M0=-24;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='H';  M=  4,-42, -8, -7,-45,  0, 16,-13, 16,-42, -2, -7,-12,-19, 12,  7,  9,  0,-44,-37; M0=-8;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='N';  M=-38,-53, -9,-27,-58,-15,  1,-56,-32,-55,-46, 32,-47,-30,  2, 23, -1,-51,-57,-49; M0=-27;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M=-27,-40,  8, -7,-42,-15,-24,-10,  8,  2,  2,-24,-38,-20, 30,-12, -1,-12,-42,-36; M0=-12;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='V';  M=  9,  3,-50,-44,  4,-45,-33, -1,-41,-27,  1, -7,  5,  9, -3,  1, 16, 16,-33, -5; M0=-12;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Q';  M= -5,-42, 11, 18,-45,-13, 16,-42,-19,-11, -1,-23,-38, 30,-24,-10,-27, -4,-43,-37; M0=-14;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='A';  M= 22,-29,-54,-47, -4,-46,-34,  2,-43, 21,  3,-42, -9, -6,-41,-15,-30,-23,-33,-30; M0=-20;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='V';  M=  8,-28,-53,-47,  3,-13,-34, 16,-43,  2,-20,-42,-46,-39,-41,-15,  3, 24,-33,  6; M0=-16;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M= 11,-42, -1, -8,-45,-37,  4,  1,  4,  3, -1,  2,-38, -4, 11, -1,  4,  6,-43,-37; M0=-7;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='M';  M=-12,-29,-46,  5, -7,-13, 11,  0,  8,  8, 19,-38,-45,-35,  4, -5,-10, -2, 17, 18; M0=-8;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='A';  M= 26,-28,-52,-46,  2,  0,  0, -6,-42,  1,  2,-41, -9, -5,-40,  0,-11, -1,-33,-29; M0=-13;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M=  0,-41, -8, -2,  1,-14, 11, 14,  4,  4,-32,  0, -9,  3,  7,-11,-27,  6,  6,-37; M0=-4;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M=  2,-42,  8, -1,-45,-13,-23,  3, -1, -9, -2,  0,-38,  8, 22,  4, -1,-12,-44,-37; M0=-7;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='N';  M=-27,  5,  0, -9,-44, -6, 10,  1, -6,  6, 13, 15,-12,  3,  6,  4, -1,-13,-43, -4; M0=-5;
/I:         MM=0; MI=-106; MD=-116; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='G';  M=-13,-40,  0,-21, -8, 23,-24,-40,  0,  2,-31, 13,-38,-20,  8, -5,-27,-36,  7,  7; M0=-11;
/I:         B0=*; E1=-10;
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_02 which contains 559'228 sequence entries.


Total number of hits 255 in 255 different sequences
Number of true positive hits 255 in 255 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.61 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] window20
Author [info] PS_Langendijk_Genevaux
Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Feature key [info] DOMAIN
Feature description [info] HTH luxR-type
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
255 sequences

AGMR_PSEAE  (P29369    ), AGMR_PSEPU  (A8R3T0    ), AHYR_AERHY  (P0A3J5    ), 
ALKS_ALCBS  (Q0VKZ4    ), ALKS_PSEOL  (P17051    ), ALKS_PSEPU  (Q9L4M7    ), 
ANOR_ACINO  (A0A0N8YGA2), ASAR_AERSA  (P0A3J6    ), BGLJ_ECOLI  (P39404    ), 
BJAR1_BRADU (Q89VI3    ), BRPA_STRHY  (Q01108    ), BVGA_BORBR  (P0A4H3    ), 
BVGA_BORPA  (P0A4H4    ), BVGA_BORPE  (P0A4H2    ), CARR_PECCC  (Q46751    ), 
CMPA_BACSU  (P14204    ), CSGD_ECOLI  (P52106    ), CSGD_SALTY  (O54294    ), 
DCTR_ECO57  (Q8X5P3    ), DCTR_ECOL6  (Q8FCK2    ), DCTR_ECOLI  (P37195    ), 
DCTR_RHOCA  (P37740    ), DCTR_SHIFL  (Q83J60    ), DEGU_BACSU  (P13800    ), 
DEGU_BREBE  (P54662    ), DESR_BACSU  (O34723    ), DEVR_MYCTO  (P9WMF8    ), 
DEVR_MYCTU  (P9WMF9    ), ECHR_DICCH  (Q46967    ), ECNR_CITFR  (O69280    ), 
ECPR_ECO24  (A7ZI28    ), ECPR_ECO27  (B7UJE2    ), ECPR_ECO55  (B7L425    ), 
ECPR_ECO57  (Q8X6I1    ), ECPR_ECO5E  (B5Z1N3    ), ECPR_ECO81  (B7MP71    ), 
ECPR_ECODH  (B1XE36    ), ECPR_ECOHS  (A7ZWT2    ), ECPR_ECOK1  (A1A7X7    ), 
ECPR_ECOKI  (Q9AME2    ), ECPR_ECOL5  (Q0TKZ0    ), ECPR_ECOL6  (Q8FKL2    ), 
ECPR_ECOLC  (B1J0X8    ), ECPR_ECOLI  (P71301    ), ECPR_ECOLU  (B7N8J2    ), 
ECPR_ECOSE  (B6I082    ), ECPR_ECOSM  (B1LHW0    ), ECPR_ECOUT  (Q1RFQ3    ), 
ECPR_KLEP3  (B5Y159    ), ECPR_KLEP7  (A6T571    ), ECPR_SHIBS  (Q325R5    ), 
ESAR_PANSE  (P54293    ), EVGA_ECO57  (P0ACZ6    ), EVGA_ECOL6  (P0ACZ5    ), 
EVGA_ECOLI  (P0ACZ4    ), EVGA_SHIFL  (P0ACZ7    ), EXAE_PSEPU  (A8R3S7    ), 
EXPR_DICD3  (Q47188    ), EXPR_PECPM  (Q47189    ), FIMW_SALTY  (P37928    ), 
FIMZ_ECO57  (P0AEL9    ), FIMZ_ECOLI  (P0AEL8    ), FIMZ_SALTY  (P26319    ), 
FIXJ_AZOC5  (P26487    ), FIXJ_BRADU  (P23221    ), FIXJ_RHIME  (P10958    ), 
GACA_PSEAE  (Q51373    ), GACA_PSEPH  (P32967    ), GACA_PSEU2  (Q52376    ), 
GACA_PSEVI  (P95582    ), GADE_ECO57  (P63206    ), GADE_ECOL6  (P63205    ), 
GADE_ECOLI  (P63204    ), GADE_SHIFL  (P63207    ), GERE_BACSU  (P11470    ), 
LASR_PSEAE  (P25084    ), LIAR_BACSU  (O32197    ), LNRK_BACSU  (P94439    ), 
LUXR_ALIFS  (P12746    ), LUXS_ALIF1  (P35327    ), LVHTH_ERYLH (Q2NB98    ), 
MALT_CITK8  (A8AQX2    ), MALT_CROS8  (A7ME76    ), MALT_ECO24  (A7ZSU8    ), 
MALT_ECO27  (B7UKC3    ), MALT_ECO45  (B7MDP4    ), MALT_ECO55  (B7L4U8    ), 
MALT_ECO57  (Q8X701    ), MALT_ECO5E  (B5YTW9    ), MALT_ECO7I  (B7NMI3    ), 
MALT_ECO81  (B7N1J6    ), MALT_ECO8A  (B7M2H9    ), MALT_ECOBW  (C4ZVX0    ), 
MALT_ECODH  (B1X764    ), MALT_ECOHS  (A8A5M7    ), MALT_ECOK1  (A1AGU2    ), 
MALT_ECOL5  (Q0TC49    ), MALT_ECOL6  (Q8CXX5    ), MALT_ECOLC  (B1IP47    ), 
MALT_ECOLI  (P06993    ), MALT_ECOLU  (B7NE23    ), MALT_ECOSE  (B6I2Y2    ), 
MALT_ECOSM  (B1LI79    ), MALT_ECOUT  (Q1R5L6    ), MALT_ENT38  (A4WFK6    ), 
MALT_ESCF3  (B7LSC1    ), MALT_KLEP3  (B5XTR7    ), MALT_KLEP7  (A6TF41    ), 
MALT_PHOLL  (Q7N976    ), MALT_SALA4  (B5F8N2    ), MALT_SALAR  (A9MMA9    ), 
MALT_SALCH  (Q57IV9    ), MALT_SALDC  (B5FKD6    ), MALT_SALEP  (B5R375    ), 
MALT_SALG2  (B5R7J9    ), MALT_SALHS  (B4TKU2    ), MALT_SALNS  (B4SVL9    ), 
MALT_SALPA  (Q5PM00    ), MALT_SALPB  (A9MTT7    ), MALT_SALPK  (B5BHH3    ), 
MALT_SALSV  (B4TY75    ), MALT_SALTI  (Q8Z227    ), MALT_SALTY  (Q8ZLI3    ), 
MALT_SERP5  (A8GKU0    ), MALT_SHIBS  (Q31VL4    ), MALT_SHIF8  (Q0SZP7    ), 
MALT_SHISS  (Q3YWK7    ), MALT_VIBCB  (A7N5N6    ), MALT_VIBCH  (Q9KNF3    ), 
MALT_VIBPA  (Q87FQ5    ), MALT_VIBVU  (Q8D4P3    ), MALT_VIBVY  (Q7MG94    ), 
MALT_YERE8  (A1JSF2    ), MALT_YERP3  (A7FNW4    ), MALT_YERPA  (Q1C2L4    ), 
MALT_YERPB  (B2K5W2    ), MALT_YERPE  (Q8ZJI2    ), MALT_YERPP  (A4TGR4    ), 
MALT_YERPS  (Q664J3    ), MALT_YERPY  (B1JHZ0    ), MCTR_RHIL3  (Q1M7A0    ), 
MOAR_KLEAE  (P54794    ), MOXX_PARDE  (P29904    ), NARL_ECO57  (P0AF30    ), 
NARL_ECOL6  (P0AF29    ), NARL_ECOLI  (P0AF28    ), NARL_MYCTO  (P9WGM4    ), 
NARL_MYCTU  (P9WGM5    ), NARL_SHIFL  (P0AF31    ), NARP_ECOLI  (P31802    ), 
NARP_HAEIN  (P44845    ), NODW_BRADU  (P15940    ), NREC_STAA1  (A7X623    ), 
NREC_STAA2  (A6U4C0    ), NREC_STAA3  (Q2FEA6    ), NREC_STAA8  (Q2FVM7    ), 
NREC_STAA9  (A5IVH2    ), NREC_STAAB  (Q2YZ42    ), NREC_STAAC  (Q5HDG5    ), 
NREC_STAAE  (A6QJN1    ), NREC_STAAM  (Q99RN8    ), NREC_STAAN  (Q7A3U5    ), 
NREC_STAAR  (Q6GE42    ), NREC_STAAS  (Q6G6T0    ), NREC_STAAT  (A8Z580    ), 
NREC_STAAW  (Q7A029    ), NREC_STACT  (Q7WZY4    ), NREC_STAEQ  (Q5HLK6    ), 
NREC_STAES  (Q8CN75    ), NREC_STAHJ  (Q4L8Q6    ), PDEL_ECOLI  (P21514    ), 
PHZR_PSECL  (P54303    ), PHZR_PSEFL  (Q51786    ), RAIR_RHIET  (O54452    ), 
RAMA_CORGL  (Q8NML3    ), RAMR_STRCO  (Q7AKE4    ), RCSA_ECO57  (P69406    ), 
RCSA_ECOLI  (P0DMC9    ), RCSA_ECOLX  (P0DMD0    ), RCSA_ERWAM  (P20098    ), 
RCSA_KLEAE  (P05338    ), RCSA_PANSE  (P27488    ), RCSA_SALTI  (Q56083    ), 
RCSA_SALTY  (P54698    ), RCSB_ECO57  (P69409    ), RCSB_ECOL6  (P69408    ), 
RCSB_ECOLI  (P0DMC7    ), RCSB_ECOLX  (P0DMC8    ), RCSB_SALTI  (Q56127    ), 
RCSB_SALTY  (P58663    ), RCSB_SHIFL  (P69410    ), RHIR_RHILV  (Q03316    ), 
RHLR_PSEAE  (P54292    ), RPAR_RHOPA  (Q6NCZ5    ), SDIA_ECOLI  (P07026    ), 
SGAR_HYPME  (P56644    ), SOLR_RALSL  (O30919    ), SOLR_RALSO  (P58590    ), 
TDIR_THAAR  (O87940    ), TMOT_PSEME  (Q8KR08    ), TODT_PSEP1  (A5W4E2    ), 
TODT_PSEPT  (I7CA98    ), TODT_PSEPU  (Q3LWR6    ), TRAR_AGRFC  (P54294    ), 
TRAR_AGRVI  (P33909    ), TRAR_RHIRD  (P33905    ), TRAR_SINFN  (P55407    ), 
TRPO_PSEAE  (P24908    ), TTRR_SALTY  (Q7CQM8    ), UHPA_ECO57  (P0AGA8    ), 
UHPA_ECOL6  (P0AGA7    ), UHPA_ECOLI  (P0AGA6    ), UHPA_SALTY  (P27667    ), 
UHPA_SHIFL  (P0AGA9    ), UVRY_ECO57  (P66798    ), UVRY_ECOL6  (P66797    ), 
UVRY_ECOLI  (P0AED5    ), UVRY_SHIFL  (P0AED6    ), VANR_VIBAN  (P74946    ), 
VJBR_BRUA2  (Q2YJ50    ), VJBR_BRUAB  (Q579W9    ), VJBR_BRUME  (Q8YAY5    ), 
VJBR_BRUO2  (A5VTN1    ), VJBR_BRUSU  (Q8FXF9    ), VRAR_STAA1  (P0C0Z1    ), 
VRAR_STAAC  (Q5HEP0    ), VRAR_STAAM  (Q7A2Q1    ), VRAR_STAAN  (Q7A4R9    ), 
VRAR_STAAR  (Q6GFH3    ), VRAR_STAAS  (Q6G850    ), VRAR_STAAW  (Q7A0I0    ), 
VRAR_STAEQ  (Q5HN50    ), VRAR_STAES  (Q8CNP9    ), VRAR_STAHJ  (Q4L7J5    ), 
VRAR_STAS1  (Q49YS9    ), Y4QH_SINFN  (P55629    ), Y890_MYCTO  (P9WMG0    ), 
Y890_MYCTU  (P9WMG1    ), Y914_MYCBO  (P59969    ), YCF29_CYAPA (P48359    ), 
YCF29_GUITH (O78417    ), YCF29_PORPU (P51343    ), YCF29_PYRYE (Q1XDE4    ), 
YDFI_BACSU  (P96686    ), YENR_YEREN  (P54295    ), YEXN_AERSA  (P45785    ), 
YGEK_ECO57  (P58664    ), YGEK_ECOLI  (Q46791    ), YHCZ_BACSU  (O07528    ), 
YHJB_ECOLI  (P37640    ), YJJQ_ECO57  (P0ADD8    ), YJJQ_ECOLI  (P0ADD7    ), 
YUKR_YERRU  (O87971    ), YVFU_BACSU  (O07019    ), YXJL_BACSU  (P55184    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

YUAB_ECOLI  (Q9JMT8    )

		
PDB
[Detailed view]
30 PDB

1A04; 1FSE; 1H0M; 1JE8; 1L3L; 1RNL; 1X3U; 1ZG1; 1ZG5; 1ZLJ; 1ZLK; 2KRF; 2Q0O; 2RNJ; 3C3W; 3C57; 3P7N; 3ULQ; 4GVP; 4IF4; 4LDZ; 4LFU; 4LGW; 5F64; 5O8Y; 5O8Z; 5VXN; 5W43; 6EO2; 6EO3
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission