PROSITE entry PS50079
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General information about the entry
| Entry name [info] | NLS_BP |
| Accession [info] | PS50079 |
| Entry type [info] | MATRIX |
| Date [info] |
01-AUG-2006 CREATED;
01-APR-2007 DATA UPDATE; 01-APR-2006 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00015 |
| Associated ProRule [info] | PRU00768 |
Name and characterization of the entry
| Description [info] | Bipartite nuclear localization signal profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=17; TOPOLOGY=LINEAR; /DISJOINT: DEFINITION=PROTECT; N1=1; N2=17; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0; R2=1.0; TEXT='RScore'; /CUT_OFF: LEVEL=0; SCORE=4; N_SCORE=4.0; MODE=1; TEXT='*'; /CUT_OFF: LEVEL=-1; SCORE=3; N_SCORE=3.0; MODE=1; TEXT='*'; /DEFAULT: D=*; I=*; B0=*; B1=*; E0=*; E1=*; MD=0; DM=0; M0=*; ... A C D E F G H I K L M N P Q R S T V W Y /I: B0=0; B1=0; /M: SY='B'; M= *, *, *, *, *, *, *, *, 0, *, *, *, *, *, 0, *, *, *, *, *; /M: SY='B'; M= *, *, *, *, *, *, *, *, 0, *, *, *, *, *, 0, *, *, *, *, *; /M: /M: /M: /M: /M: /M: /M: /M: /M: D=0; /M: D=0; /M: SY='B'; M= 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0; /M: SY='B'; M= 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0; /M: SY='B'; M= 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0; /M: SY='B'; M= 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0; /M: SY='B'; M= 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0; /I: E0=0; E1=0;» more |
Comments [info]
| Matrix type [info] | localization_signal |
| Scaling database [info] | none |
| Skip flag [info] | TRUE |
| Author [info] | K_Hofmann, N_Hulo |
| Version [info] | 2 |