PROSITE entry PS50092

View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission

General information about the entry

Entry name [info]	TSP1
Accession [info]	PS50092
Entry type [info]	MATRIX
Date [info]	01-DEC-2001 CREATED; 13-FEB-2019 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC50092
Associated ProRule [info]	PRU00210

Name and characterization of the entry

Description [info]

Thrombospondin type-1 (TSP1) repeat profile.

Matrix / Profile [info]

/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=53;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=53;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=5.7964869; R2=0.0000896; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=313572.8125000; R2=1.2190678; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=24593; H_SCORE=343553; N_SCORE=8.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=7852; H_SCORE=323145; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: B0=*; B1=*; E0=*; E1=*; MM=*; II=*;

...

                A      C      D      E      F      G      H      I      K      L      M      N      P      Q      R      S      T      V      W      Y
/I:         B0=-8455; B1=-8455; BM=-4; BD=-8658;
/M: SY='C';  M=  -542,  2823,  1951,   201, -2204, -1425,  1451, -3068,  -785, -1803, -1535,   432,   746,    68, -1108,  -395,   -34, -1111,  1123, -3579; M0=-660;
/I:         MM=-79; MI=-4237; MD=-14865; IM=-9; II=-7343; DM=-701; DD=-1378;
/M: SY='C';  M=  -200,  4040,  -839,  -454, -1458,  1838, -5447, -1098, -2232, -2599, -2444,  -708,  1105,  -406, -2395,  -950, -1001, -2506, -7358, -1538; M0=-1120;
/I:         MM=-3557; MI=-128; MD=-14865; IM=-1; II=-11436; DM=-701; DD=-1378;
/M: SY='W';  M= -1748,  1453, -2059,  -847,  -317, -3229,   -37, -1792, -1462,  -438,   282, -1812, -2175,    80,   152,  -400,  -622,   307,  4870,  -309; M0=-900;
/I:         MM=0; MI=-13823; MD=-14865; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='W';  M= -1399, -1965, -1942, -1454, -3341,  1412, -1758, -4002, -2164, -2979, -6298, -1131, -6857, -2158, -2904,  2031,   645, -2999,  4427, -1468; M0=-1827;
/I:         MM=-3; MI=-13823; MD=-8974; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='E';  M=    21,   859,   401,  1476,  -526, -1922,   761, -1450,  -433, -1283, -1558, -1165,  1315,   653,  -199,   209,  -310,  -240, -7425,  -882; M0=-382;
/I:         MM=0; MI=-13820; MD=-14862; IM=-894; II=-1115; DM=-1322; DD=-737;
/M: SY='W';  M=  -509, -5907, -4506, -7790,  -422, -3237,  -681, -2040, -7385, -1803, -1574, -7274, -1723, -7008, -7185, -1980,   650,  -352,  5650,   399; M0=-2998;
/I:         MM=0; MI=-13820; MD=-14862; IM=-894; II=-1115; DM=-415; DD=-1999;
/M: SY='S';  M=  -959, -1424, -1565,    72, -7564,  2093, -2306, -3666, -2674, -3694, -1880, -1414, -6845, -1799, -3925,  2475,   893, -3064, -7430, -6749; M0=-2105;
/I:         MM=0; MI=-13823; MD=-14865; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='P';  M=    -6, -7250,  1036,  1946, -7571, -1752,  -582, -7322, -1105, -2544, -3966,  -155,  2269,  -539, -2753,   926, -1032, -2443, -7433, -3390; M0=-1616;
/I:         MM=-7; MI=-13823; MD=-7713; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='W';  M= -6131, -5958, -8464, -5134,  -436, -4007, -6513, -5453, -7425, -4188, -2923, -4747, -3447, -7049, -4825, -4820, -3389, -3018,  6193, -1126; M0=-4605;
/I:         MM=-23; MI=-5981; MD=-14858; IM=-1408; II=-682; DM=-883; DD=-1127;
/M: SY='S';  M= -1545, -2840, -1720,  -993, -7568,  1204, -2997, -7318, -2768, -3708, -3141, -2008, -6841, -1893, -2965,  2993,  1306, -6869, -7430, -6747; M0=-2740;
/I:         MM=0; MI=-13819; MD=-14861; IM=-894; II=-1115; DM=-1440; DD=-663;
/M: SY='P';  M=   394, -7246,    99,  1425, -3281, -1315,  -715, -3163,   -91, -1256, -1282, -2542,  2220,   915,  -873,   466,  -210, -1242, -2841, -6747; M0=-897;
/I:         MM=-7; MI=-7750; MD=-14861; IM=-93; II=-3998; DM=-378; DD=-2118;
/M: SY='C';  M= -7527,  5865,-10470,-10792, -4025, -8375, -7926, -9631,-10249, -9296, -8989, -8855, -9085, -9539, -5235, -7738, -4534, -6089, -1740, -6258; M0=-7804;
/I:         MM=0; MI=-13823; MD=-14865; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='S';  M= -3082, -2863,   -15, -2535, -3177, -3154, -1301, -3182, -3008, -3596, -1300,  -562, -1510, -1439, -2104,  3251,   875, -3056, -7422, -6744; M0=-2034;
/I:         MM=-148; MI=-13823; MD=-3364; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='V';  M=  1125, -2252, -1602,  -595, -4606,  -880,  -684, -3952,  1154, -2848, -1559, -2434, -1863,  -322,  1401,  -508,   447,  1898, -7285, -3649; M0=-1038;
/I:         MM=-66; MI=-4485; MD=-14718; IM=-2440; II=-294; DM=-1783; DD=-495;
/M: SY='T';  M= -2116, -7146, -1327,  -522, -5117, -3195, -2416, -4281, -1028, -2392, -2224,  -707,   669,  -401, -1742,  2076,  2719, -2357, -7329, -2797; M0=-1582;
/I:         MM=0; MI=-13718; MD=-14760; IM=-894; II=-1115; DM=-2238; DD=-344;
/M: SY='C';  M= -9266,  5867, -4290,-10942, -3858, -9691, -7682, -9983,-10866, -9378, -9363, -9538, -4560, -9879,-10337, -9311, -9554, -9817, -6986, -3391; M0=-8473;
/I:         MM=-54; MI=-4763; MD=-14781; IM=-2191; II=-357; DM=-1017; DD=-983;
/M: SY='G';  M= -1843, -7208,  -299, -1277, -3030,  3437, -2840, -3363, -2317, -2718, -6297, -1212, -2962,  -497, -1784,  -787, -1634, -6830, -7391, -6708; M0=-2259;
/I:         MM=0; MI=-13780; MD=-14822; IM=-894; II=-1115; DM=-63; DD=-4550;
/M: SY='G';  M= -1106, -3723,   106,   268, -2447,  1950,  -237, -1132,   439, -1309,  -759,  -193,  -479,    22,   289,   369,  -330,  -124, -7430, -2378; M0=-461;
/I:         MM=-78; MI=-13823; MD=-4248; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='G';  M= -1630,  1722, -5594, -3045, -7455,  3549, -1453, -7191, -2160, -2191, -6246, -1858, -2748, -3570, -3286, -1847, -1636, -6764, -2979, -6676; M0=-3022;
/I:         MM=-240; MI=-2704; MD=-14787; IM=-546; II=-1666; DM=-94; DD=-3989;
/M: SY='T';  M= -1853, -1857, -7906,  -999,    97, -4279,   821,  1114,    52,  -505,   597, -1556, -7598,   297,  -409,  -584,  1662,  1498,  1001,  -183; M0=-1187;
/I:         MM=0; MI=-13820; MD=-14862; IM=-894; II=-1115; DM=-400; DD=-2047;
/M: SY='Q';  M= -1931, -2953, -5759,  -862, -7269, -6822,  -361, -1786,   728, -3058,   451, -5500, -6912,  3230,  2536,  -712,  -907, -2675, -7280, -2665; M0=-2445;
/I:         MM=0; MI=-13823; MD=-14865; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='T';  M= -2101, -1906, -2652,  -326,  -448, -3154,   524,    87,   -83, -1185,   814, -1273, -6936,   319,  1161,   988,  1713,   292,  -319,   531; M0=-791;
/I:         MM=0; MI=-13823; MD=-14865; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='R';  M= -2785, -9026, -8966, -3263, -9876, -5398, -6744, -9188, -2491, -4349, -8155, -7514, -8782,  -251,  4124, -1873, -3092, -8950, -3083, -2385; M0=-4824;
/I:         MM=-5; MI=-13823; MD=-8101; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='T';  M= -1802, -7239, -1163,   297,  -944, -2086,   765,  -775,   269, -1414, -2293,    40, -2483,   814,  1125,  1109,  1516,   -78, -1100,    35; M0=-561;
/I:         MM=0; MI=-13818; MD=-14860; IM=-894; II=-1115; DM=-1696; DD=-532;
/M: SY='R';  M= -1650, -5912, -4376, -7726, -1924, -7616, -6484, -2454, -1543, -2190, -1834, -7241, -2381, -3326,  3620, -2958, -3211,  1845, -6368, -2007; M0=-2985;
/I:         MM=-6584; MI=-15; MD=-14860; IM=-3; II=-8697; DM=-309; DD=-2373;
/M: SY='C';  M= -2855,  5345, -8413, -2750, -1558, -1793, -6499,  -282, -4815, -1063, -3512, -3564, -1644, -2596, -2790, -2613, -3416,   579, -6369, -1135; M0=-2515;
/I:         MM=-10; MI=-13823; MD=-7226; IM=-894; II=-1115; DM=-701; DD=-1378;
/M: SY='N';  M= -1488, -7181,  -283, -1096, -1974, -2085,  -387,   335,   257,   777,  -191,  1006, -1196,   137,   418,   -87,   410,   970,  -301,  -252; M0=-365;
/I:         MM=-97; MI=-13813; MD=-3949; IM=-894; II=-1115; DM=-2202; DD=-354;
/M: SY='N';  M=  -273, -1281,   -29,  -727, -1291,  -289,   465,  -525,  -609, -1551,  -236,  1874,  -293,  1010,   630,  1005,  -283,  -726,  -767, -3640; M0=-342;
/I:         MM=-113; MI=-13717; MD=-3734; IM=-894; II=-1115; DM=-5060; DD=-44;
/M: SY='P';  M=  -404, -7027,  -393,   324,  -196,  -289,   776, -1702,  -136,  -994, -1646,  -502,  2623,   -45,  -288,  -280,  -654, -1233, -2195,  -264; M0=-482;
/I:         MM=-7; MI=-13604; MD=-7620; IM=-894; II=-1115; DM=-6013; DD=-23;
/M: SY='P';  M=   445, -1654,   281,    32, -1230,   148,  -196, -2019,  -299,  -497,  -392,   913,  1643,   381,  -315,   304, -1357,  -252, -7205, -2306; M0=-326;
/I:         MM=-151; MI=-13597; MD=-3331; IM=-894; II=-1115; DM=-6056; DD=-22;
/M: SY='P';  M=   150, -6875,    39,  -739,  -887,   945,   -81, -1108,   -76,  -973,  -847,  -710,  2278,   993,  -680,  -544,  -440, -1784, -7059,  -846; M0=-514;
/I:         MM=0; MI=-13446; MD=-14488; IM=-894; II=-1115; DM=-6708; DD=-14;
/M: SY='Q';  M=    65, -2493,   -43,  -575,   465,   981,   166, -1949,   702, -1679,  -779,   959,  -725,  1340,   571,   295,  -990, -1679, -2029,  -791; M0=-336;
/I:         MM=-2780; MI=-667; MD=-2155; IM=-2101; II=-383; DM=-1706; DD=-528;
/M: SY='G';  M= -1443,  1390,  1112,   506, -6996,  2245,   697, -6747, -1102, -1506, -5764,   368,  -549, -1117,  -697,   132,  -961, -1552,  -975,  -438; M0=-1104;
/I:         MM=0; MI=-13238; MD=-14280; IM=-894; II=-1115; DM=-162; DD=-3233;
/M: SY='G';  M=  -481,  -399,   730,    71, -1472,  2500,  -378, -2962, -1360,  -861, -2460,   145,  -988,  -303,  -430,  -304,  -692, -1616, -1202, -1808; M0=-603;
/I:         MM=0; MI=-13772; MD=-14814; IM=-894; II=-1115; DM=-4091; DD=-87;
/M: SY='C';  M=   162,  3627,  -916,     5, -1427,   341,   488, -2702,   564, -2697,  -227,    -6, -1018,   573,   596,   189,  -501, -3342, -1598, -1458; M0=-674;
/I:         MM=0; MI=-13772; MD=-14814; IM=-894; II=-1115; DM=-761; DD=-1287;
/M: SY='C';  M=   155,  1873,  1037,    56,  -724,  -981,    49, -2127,  -323,  -345,  -768,   243,  1253,    16,  -540,   125,   172, -1208, -2329,  -100; M0=-232;
/I:         MM=0; MI=-13802; MD=-14844; IM=-894; II=-1115; DM=-724; DD=-1342;
/M: SY='C';  M= -1424,  5077, -2158,  -292, -2455, -2195,   987, -2428, -1790, -1556, -1366, -5176,   583,   198, -2086, -1754,  -843, -2990, -2470, -2653; M0=-1597;
/I:         MM=-49; MI=-13815; MD=-4909; IM=-894; II=-1115; DM=-2053; DD=-398;
/M: SY='C';  M=  -234,  2468,  -134,   673, -2190, -1891,   259, -1324,  -592,  -294,  -950,  -251,  1032,   855,   179,   317,   383,  -488, -2643, -2173; M0=-321;
/I:         MM=0; MI=-13766; MD=-14808; IM=-894; II=-1115; DM=-4244; DD=-78;
/M: SY='G';  M= -1085, -1748,    74,   149, -1561,  2662, -3975, -1829,  -423, -1123,  -663, -1912,   682,  -265,  -174, -1183,  -976, -1204, -2521, -2103; M0=-711;
/I:         MM=0; MI=-13766; MD=-14808; IM=-894; II=-1115; DM=-1377; DD=-701;
/M: SY='P';  M=  -230,    -1,   625,   764, -4204, -2572,   151, -2991,  1223,  -681, -1336,  -221,  1472,   758,   865,  -123,  -368, -1342, -1818, -3733; M0=-596;
/I:         MM=-24; MI=-6472; MD=-7616; IM=-3142; II=-174; DM=-780; DD=-1260;
/M: SY='P';  M=   140, -7222,   794,  -663, -4194, -1982,   -41, -1816,  -263,   507, -1358,    28,  2175,  -847,   538,    46,   231, -1860, -1163, -2237; M0=-613;
/I:         MM=-31; MI=-5573; MD=-14843; IM=-6925; II=-12; DM=-2146; DD=-369;
/M: SY='P';  M=  -542, -4685, -2047,   512, -1270, -2003,   819,  -189,   583,  -462,  -318, -1607,   907,   820,   495,   -20,   764,   661, -1491,  -664; M0=-318;
/I:         MM=-202; MI=-2937; MD=-14846; IM=-1074; II=-930; DM=-1115; DD=-893;
/M: SY='E';  M= -1332, -7238,   633,  2864, -7559, -2241,  -768, -1477, -1853, -1962,  -345, -5375, -2416,  1870,   153,   -92,  -862, -3004, -7422, -6739; M0=-1714;
/I:         MM=0; MI=-13812; MD=-14854; IM=-894; II=-1115; DM=-2344; DD=-316;
/M: SY='T';  M=  -996, -7157, -4330,   535,   241, -3079,  -246,  -280,   537, -1304,    38, -2545, -6857,   445,   389,   607,  2039,   167, -7363,   641; M0=-1019;
/I:         MM=-75; MI=-4656; MD=-6511; IM=-12; II=-6920; DM=-2344; DD=-316;
/M: SY='R';  M=  -990, -7223, -1530,  1770, -3344, -3007, -1395, -1670,   978, -5283,  -925, -3095, -4610,  2114,  2575, -1867, -1123, -1658, -1764, -6724; M0=-1787;
/I:         MM=-9; MI=-13796; MD=-7357; IM=-894; II=-1115; DM=-3312; DD=-153;
/M: SY='P';  M=   308, -7202,  -679,   -24,  -719, -2308,  -511,  -825,     8,  -770,  -662,   137,  2026,   201,  -202,   582,   311,  -258, -2646,  -659; M0=-377;
/I:         MM=-61; MI=-13787; MD=-4600; IM=-894; II=-1115; DM=-2409; DD=-301;
/M: SY='C';  M= -4806,  5858,-10034, -2817,-10076, -7624, -9400, -9880,-10077,-10161, -9187, -8458, -8442, -9499, -9681, -6992, -4535, -4938,-10295,-10286; M0=-7675;
/I:         MM=0; MI=-13731; MD=-14773; IM=-894; II=-1115; DM=-4868; DD=-50;
/M: SY='N';  M=  -856, -7145,  -640,   157,  -780,  -919,  -125, -1275, -1136, -1082,   391,  2679,  -864,    17,  -523,   476,   -46,   -89, -2264,   182; M0=-484;
/I:         MM=-20; MI=-13731; MD=-6194; IM=-894; II=-1115; DM=-4868; DD=-50;
/M: SY='M';  M=  -463, -7086,  -497,   -37, -2343,  -151,  -418,  -398,  -829,   714,  1553,   -60,   115,   125,  -811,  -275,  1060,   652, -2814, -1840; M0=-312;
/I:         MM=0; MI=-13711; MD=-14753; IM=-894; II=-1115; DM=-3061; DD=-184;
/M: SY='Q';  M= -1024, -7150,   584,   565, -2227,    66,  1148, -2289,  -503, -1459, -1671,  -128,  1538,  2089,   507,  -507,  -489,  -725, -2622, -2672; M0=-580;
/I:         MM=-219; MI=-13722; MD=-2831; IM=-894; II=-1115; DM=-3258; DD=-159;
/M: SY='P';  M=   859, -6945,   479,   425, -7266, -2468, -2946, -1284,   283, -1667, -1640,  -399,  2540,   -24,  -202,   -64,  -392,  -715, -7128, -6446; M0=-1057;
/I:         MM=-335; MI=-2271; MD=-14555; IM=-249; II=-2659; DM=-1156; DD=-859;
/M: SY='C';  M= -7919,  5824, -8402, -1878,-10113, -8448, -7035, -4195, -3349, -9135, -8470, -7584, -8717, -3835, -4609, -3796, -4362, -9010, -8970, -8905; M0=-6380;
/I:         MM=0; MI=-13659; MD=-14702; IM=-894; II=-1115; DM=-18; DD=-6308;
/M: SY='P';  M=  -823, -7248,     5,   294, -3109,  -431,   175, -2641,  -739, -1263, -1791,  -965,  2990,  -361, -1117,   235,  -126, -1721, -7432,   -62; M0=-840;
/I:         E0=-1000; E1=-1000;

» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.

Total number of hits	848 in 245 different sequences
Number of true positive hits	848 in 245 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	1
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	99.88 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	27
Matrix type [info]	protein_domain
Scaling database [info]	reversed
Author [info]	CJA_Sigrist
Feature key [info]	DOMAIN
Feature description [info]	TSP type-1
Version [info]	7

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

245 sequences

ADT1_CAEEL  (G5ECS8), ADT2_CAEEL  (Q19204), AGRB1_HUMAN (O14514),

AGRB1_MOUSE (Q3UHD1), AGRB1_RAT   (C0HL12), AGRB2_HUMAN (O60241), 
AGRB2_MOUSE (Q8CGM1), AGRB2_PONAB (Q5R7Y0), AGRB3_HUMAN (O60242), 
AGRB3_MOUSE (Q80ZF8), ATL1_HUMAN  (Q8N6G6), ATL1_MOUSE  (Q8BLI0), 
ATL2_HUMAN  (Q86TH1), ATL2_MOUSE  (Q7TSK7), ATL3_HUMAN  (P82987), 
ATL4_HUMAN  (Q6UY14), ATL4_MOUSE  (Q80T21), ATL4_RAT(Q4FZU4), 
ATL5_HUMAN  (Q6ZMM2), ATS10_HUMAN (Q9H324), ATS10_MOUSE (P58459), 
ATS12_HUMAN (P58397), ATS12_MOUSE (Q811B3), ATS13_HUMAN (Q76LX8), 
ATS13_MOUSE (Q769J6), ATS14_HUMAN (Q8WXS8), ATS15_HUMAN (Q8TE58), 
ATS15_MOUSE (P59384), ATS16_HUMAN (Q8TE57), ATS16_MOUSE (Q69Z28), 
ATS17_HUMAN (Q8TE56), ATS18_HUMAN (Q8TE60), ATS18_MOUSE (Q4VC17), 
ATS19_HUMAN (Q8TE59), ATS19_MOUSE (P59509), ATS1_BOMMO  (Q5W7F4), 
ATS1_HUMAN  (Q9UHI8), ATS1_MOUSE  (P97857), ATS1_RAT(Q9WUQ1), 
ATS20_HUMAN (P59510), ATS20_MOUSE (P59511), ATS2_BOVIN  (P79331), 
ATS2_HUMAN  (O95450), ATS2_MOUSE  (Q8C9W3), ATS3_HUMAN  (O15072), 
ATS4_BOVIN  (Q9TT93), ATS4_HUMAN  (O75173), ATS4_MOUSE  (Q8BNJ2), 
ATS4_PONAB  (Q5RFQ8), ATS4_RAT(Q9ESP7), ATS5_BOVIN  (Q9TT92), 
ATS5_HUMAN  (Q9UNA0), ATS5_MOUSE  (Q9R001), ATS6_HUMAN  (Q9UKP5), 
ATS7_HUMAN  (Q9UKP4), ATS7_MOUSE  (Q68SA9), ATS7_RAT(Q1EHB3), 
ATS8_HUMAN  (Q9UP79), ATS8_MOUSE  (P57110), ATS9_HUMAN  (Q9P2N4), 
CADN_ACRMI  (B3EWZ3), CCN1_CHICK  (P19336), CCN1_HUMAN  (O00622), 
CCN1_MOUSE  (P18406), CCN1_PANTR  (A5A6L1), CCN1_RAT(Q9ES72), 
CCN2_BOVIN  (O18739), CCN2_HUMAN  (P29279), CCN2_MOUSE  (P29268), 
CCN2_PIG(O19113), CCN2_RAT(Q9R1E9), CCN3_CHICK  (P28686), 
CCN3_COTJA  (P42642), CCN3_HUMAN  (P48745), CCN3_MOUSE  (Q64299), 
CCN3_RAT(Q9QZQ5), CCN3_XENLA  (P51609), CCN4_HUMAN  (O95388), 
CCN4_MOUSE  (O54775), CCN4_RAT(Q99PP0), CCN5_HUMAN  (O76076), 
CCN5_MOUSE  (Q9Z0G4), CCN5_RAT(Q9JHC6), CCN6_HUMAN  (O95389), 
CCN6_MOUSE  (D3Z5L9), CILP1_HUMAN (O75339), CILP1_MOUSE (Q66K08), 
CILP2_HUMAN (Q8IUL8), CILP2_MOUSE (D3Z7H8), CO6_BOVIN   (Q29RU4), 
CO6_HUMAN   (P13671), CO6_PANTR   (P61134), CO6_PONPY   (P61135), 
CO6_RAT (Q811M5), CO7_BOVIN   (Q29RQ1), CO7_HUMAN   (P10643), 
CO7_PIG (Q9TUQ3), CO7_PONAB   (Q5RAD0), CO8A_HUMAN  (P07357), 
CO8A_MOUSE  (Q8K182), CO8A_RABIT  (P98136), CO8B_HUMAN  (P07358), 
CO8B_MOUSE  (Q8BH35), CO8B_ONCMY  (Q90X85), CO8B_PAROL  (Q9PVW7), 
CO8B_RABIT  (P98137), CO8B_RAT(P55314), CO9_BOVIN   (Q3MHN2), 
CO9_HORSE   (P48770), CO9_HUMAN   (P02748), CO9_MOUSE   (P06683), 
CO9_ONCMY   (P06682), CO9_RABIT   (P48747), CO9_RAT (Q62930), 
CO9_TAKRU   (P79755), CSP_PLABA   (P23093), CSP_PLABE   (P06915), 
CSP_PLABR   (P14593), CSP_PLACB   (P08672), CSP_PLACC   (P08673), 
CSP_PLACG   (P08674), CSP_PLACL   (P08675), CSP_PLACM   (P08676), 
CSP_PLAF7   (Q7K740), CSP_PLAFA   (P02893), CSP_PLAFO   (P19597), 
CSP_PLAFT   (P13814), CSP_PLAFW   (P08307), CSP_PLAKH   (P02894), 
CSP_PLAKU   (P04922), CSP_PLAMA   (P13815), CSP_PLARE   (P26694), 
CSP_PLASI   (Q03110), CSP_PLAVB   (P08677), CSP_PLAVS   (P13826), 
CSP_PLAYO   (P06914), CTX_SEPES   (B2DCR8), ECT_ACRMI   (B3EWZ8), 
GON1_CAEEL  (Q19791), HMCN1_HUMAN (Q96RW7), HMCN1_MOUSE (D3YXG0), 
ISM1_DANRE  (Q5EGE1), ISM1_HUMAN  (B1AKI9), ISM1_MOUSE  (A2ATD1), 
ISM2_DANRE  (Q58T08), ISM2_HUMAN  (Q6H9L7), ISM_XENLA   (Q8QFV1), 
MADD4_CAEEL (P90884), MIG21_CAEEL (G1FC92), MLP_ACRMI   (B3EWY9), 
NAS33_CAEEL (P55114), NAS34_CAEEL (Q21059), NAS35_CAEEL (P98060), 
NAS35_HAECO (D5FM34), NAS35_TELCI (A0A0C5PRQ1), NAS36_BRUMA (D5FM38), 
NAS36_CAEBR (Q61EX6), NAS36_CAEEL (Q18206), NAS36_HAECO (D5FM37), 
NAS37_CAEEL (Q93243), NAS38_CAEEL (Q20942), PPN1_CAEEL  (O76840), 
PPN_DROME   (Q868Z9), PPN_HUMAN   (O95428), PPN_MOUSE   (Q9EPX2), 
PROP_CAVPO  (Q64181), PROP_HUMAN  (P27918), PROP_MOUSE  (P11680), 
PROP_PONAB  (Q5RBP8), RSPO1_DANRE (Q6DHR0), RSPO1_HUMAN (Q2MKA7), 
RSPO1_MOUSE (Q9Z132), RSPO2_HUMAN (Q6UXX9), RSPO2_MOUSE (Q8BFU0), 
RSPO2_XENLA (Q5UE90), RSPO2_XENTR (Q5M7L6), RSPO3_BOVIN (Q1RMU1), 
RSPO3_DANRE (Q5R328), RSPO3_HUMAN (Q9BXY4), RSPO3_MOUSE (Q2TJ95), 
RSPO4_HUMAN (Q2I0M5), RSPO4_MOUSE (Q8BJ73), SBSPO_BOVIN (Q32L50), 
SBSPO_HUMAN (Q8IVN8), SBSPO_MOUSE (Q3UPR9), SEM5A_HUMAN (Q13591), 
SEM5A_MOUSE (Q62217), SEM5A_RAT   (D3ZTD8), SEM5B_HUMAN (Q9P283), 
SEM5B_MOUSE (Q60519), SEM5C_DROME (Q9VTT0), SPON1_BOVIN (Q9GLX9), 
SPON1_CHICK (Q9W770), SPON1_HUMAN (Q9HCB6), SPON1_MOUSE (Q8VCC9), 
SPON1_RAT   (P35446), SPON1_XENLA (P35447), SPON2_HUMAN (Q9BUD6), 
SPON2_MOUSE (Q8BMS2), SPON2_RAT   (Q9WV75), SSP2_PLAYO  (Q01443), 
SSPO_BOVIN  (P98167), SSPO_CHICK  (Q2PC93), SSPO_HUMAN  (A2VEC9), 
SSPO_MOUSE  (Q8CG65), SSPO_RAT(Q700K0), THS7A_DANRE (A7MBS7), 
THS7A_HUMAN (Q9UPZ6), THS7A_MOUSE (Q69ZU6), THS7B_HUMAN (Q9C0I4), 
THS7B_MOUSE (Q6P4U0), THSD1_BOVIN (Q5BIR3), THSD1_HUMAN (Q9NS62), 
THSD1_MOUSE (Q9JM61), THSD1_PONAB (Q5R7R7), THSD4_HUMAN (Q6ZMP0), 
THSD4_MOUSE (Q3UTY6), THSD8_HUMAN (A0A1W2PP97), TRAP_PLABA  (A0A509AST0), 
TRAP_PLAFA  (P16893), TSP1_BOVIN  (Q28178), TSP1_HUMAN  (P07996), 
TSP1_MOUSE  (P35441), TSP1_XENLA  (P35448), TSP2_BOVIN  (Q95116), 
TSP2_CHICK  (P35440), TSP2_HUMAN  (P35442), TSP2_MOUSE  (Q03350), 
UN5BA_XENLA (Q8JGT4), UN5BB_XENLA (C5IAW9), UNC5A_HUMAN (Q6ZN44), 
UNC5A_MOUSE (Q8K1S4), UNC5A_RAT   (O08721), UNC5B_HUMAN (Q8IZJ1), 
UNC5B_MOUSE (Q8K1S3), UNC5B_RAT   (O08722), UNC5C_CHICK (Q7T2Z5), 
UNC5C_HUMAN (O95185), UNC5C_MOUSE (O08747), UNC5C_RAT   (Q761X5), 
UNC5D_HUMAN (Q6UXZ4), UNC5D_MOUSE (Q8K1S2), UNC5D_RAT   (F1LW30), 
UNC5_CAEEL  (Q26261), UNC5_DROME  (Q95TU8)

» more

Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

1 sequence

YSM5_CAEEL  (Q10125)

PDB
[Detailed view]

79 PDB

1LSL; 1SZL; 1VEX; 1W0R; 1W0S; 2BBX; 2RJQ; 3GHM; 3GHN; 3OJY; 3R6B; 3T5O; 3VDJ; 3VDK; 3VDL; 3VN4; 4A5W; 4E0S; 4V2A; 5FMW; 5FOE; 5FTT; 6B0S; 6CXO; 6DLW; 6H03; 6H04; 6MB3; 6MHG; 6OOL; 6QIG; 6RK1; 6RUR; 6RUS; 6RUV; 6RV6; 6S08; 6S0A; 6S0B; 6SEJ; 6X87; 7B26; 7NOZ; 7NYC; 7NYD; 7R84; 7R85; 7R86; 7RXI; 7RXJ; 7RXL; 7RXP; 7S0X; 7V05; 7YYK; 7ZA1; 7ZA2; 7ZA3; 8AY1; 8B0F; 8B0G; 8B0H; 8CKG; 8CKK; 8CKL; 8CKM; 8DE6; 8DYW; 8DYX; 8DYY; 8DZ3; 8DZ4; 8DZ5; 8EH5; 8EK1; 8EKA; 8OIL; 8OXR; 8Q6R
» more