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| Entry: PS50112 |
General information about the entry
| Entry name [info] | PAS |
| Accession [info] | PS50112 |
| Entry type [info] | MATRIX |
| Date [info] |
01-DEC-2001 CREATED;
10-MAY-2017 DATA UPDATE; 11-DEC-2019 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC50112 |
| Associated ProRule [info] | PRU00140 |
Name and characterization of the entry
| Description [info] | PAS repeat profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=72; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=67; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.1544000; R2=0.0321907; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=2211.1088867; R2=3.0405064; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=229; H_SCORE=2907; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=167; H_SCORE=2719; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: D=-20; I=-20; B1=-40; E1=-40; MI=-105; MD=-105; IM=-105; DM=-105; MM=1; M0=-1; ... A B C D E F G H I K L M N P Q R S T V W Y Z /I: B1=0; BI=-105; BD=-105; /M: SY='S'; M= -2, 0,-20, 0, 0,-17,-13, -8,-14, -3,-15,-10, 2,-15, 0, -1, 6, 1, -9,-29,-13, -1; /M: SY='E'; M= -7, -4,-25, -2, 13,-15,-17, -4,-17, 1,-12,-10, -6, -9, 4, 1, -4, -5,-16,-20, -4, 7; /M: SY='E'; M= 2, 1,-22, 0, 8,-21,-14, -7,-19, 5,-17,-11, 1,-10, 4, 2, 2, -1,-15,-25,-13, 5; /M: SY='R'; M= -7, -5,-24, -6, 1, -9,-19, -3,-15, 0, -8, -6, -4,-15, -1, 4, -6, -4,-13,-17, -4, -1; /M: SY='L'; M=-12,-22,-24,-26,-20, 10,-24,-12, 11,-19, 15, 13,-19,-22,-16,-15,-19, -9, 4,-10, 8,-19; /M: SY='R'; M= -3, -8,-22, -8, 0,-18,-18,-10,-12, 4,-14, -7, -6,-11, -1, 10, -3, -4, -5,-26,-13, -2; /M: SY='Q'; M= -6, -5,-22, -5, 3,-17,-17, 1,-15, 0,-11, -5, -3,-14, 6, 5, -3, -4,-14,-23, -8, 3; /M: SY='I'; M= 1,-18,-20,-23,-17, -4,-21,-19, 12,-19, 10, 6,-14,-18,-14,-16, -9, -2, 9,-23, -7,-17; /M: SY='L'; M= -7,-25,-22,-28,-19, 5,-27,-19, 16,-22, 18, 12,-22,-16,-16,-19,-17, -8, 11,-20, -2,-19; /M: SY='E'; M= -8, 14,-24, 17, 24,-28,-13, 2,-26, 4,-22,-17, 10,-10, 12, 1, 3, -6,-24,-31,-17, 18; /I: I=-7; MI=-8; MD=-21; IM=-8; /M: SY='S'; M= 2, 0,-19, -4, -4,-19, -7, -7,-16, -7,-17,-12, 5, -5, -3, -8, 10, 10,-13,-29,-15, -4; D=-4; /I: DM=-21; /M: SY='L'; M= 5,-15,-16,-20,-13, -6,-19,-17, 5,-16, 8, 3,-12,-17,-11,-16, -4, 2, 5,-23, -8,-12; D=-4; /I: DM=-21; /M: SY='P'; M= -6, -1,-25, -1, -3,-19,-14, -8,-11, -7,-16,-10, -1, 3, -5, -9, 0, 0,-11,-28,-14, -6; D=-4; /I: DM=-21; /M: SY='D'; M= -3, 4,-21, 8, -1,-23, -7,-13,-18, -8,-19,-15, -1, -1, -8,-13, 2, -2,-12,-31,-19, -5; /M: SY='P'; M= -1,-14,-25,-16,-13, -5, -1,-18,-14,-16,-14,-10, -9, 8,-17,-18, -4, -6,-13,-20,-14,-16; /M: SY='I'; M= -6,-24,-22,-30,-23, 4,-28,-21, 22,-21, 10, 12,-18,-21,-18,-20,-12, -4, 18,-15, 1,-22; /M: SY='F'; M=-11,-27,-22,-33,-25, 31,-26,-19, 6,-24, 9, 4,-22,-27,-25,-19,-18, -9, 3, 10, 15,-23; /M: SY='V'; M= 2,-17,-18,-20,-16, -8,-13,-19, 4,-13, 0, 2,-15,-21,-14,-11, -7, -6, 10,-23,-10,-16; /M: SY='V'; M= -2,-20,-19,-23,-18, -3,-22,-15, 6,-16, 4, 2,-17,-22,-15,-14, -8, -1, 9,-10, -2,-17; /M: SY='D'; M= -9, 31,-24, 39, 10,-31, -8, -2,-31, -1,-26,-23, 17,-12, 0, -5, 6, -2,-23,-36,-18, 5; /M: M= 0, -6,-20, -7, 0,-16,-16, -9, -8, -9, -7, -6, -6, -9, -4,-10, -1, -3, -7,-27,-13, -3; /M: SY='B'; M= -7, 13,-24, 13, 6,-19,-13, -3,-21, 1,-19,-14, 10,-14, 2, -1, 2, -2,-18,-28,-11, 4; /M: SY='G'; M= 1, -8,-25,-10,-13,-22, 34,-17,-28,-13,-21,-13, -2,-16,-13,-14, 1, -8,-20,-22,-22,-13; /I: I=-7; MI=-8; IM=-8; DM=-15; MD=-15; /M: SY='R'; M= -9, -7,-21, -8, -4,-15,-17,-10,-13, 0,-13, -7, -5,-12, -4, 2, -9, -8,-12,-15, -8, -5; /M: SY='I'; M= -8,-25, -9,-31,-24, 4,-30,-24, 20,-24, 10, 9,-20,-24,-20,-23,-15, -7, 17,-21, -3,-23; /M: SY='I'; M= -4,-13,-16,-19,-14, -3,-22,-16, 7,-17, 5, 4, -9,-20,-12,-15, -4, 2, 7,-26, -7,-14; /M: SY='Y'; M=-12,-11,-26,-11, -7, 10,-17, 3, -9,-11, -5, -4,-11,-22, -9,-11,-11, -8,-11, -1, 26,-10; /M: SY='W'; M= -4,-27,-13,-31,-25, 2,-23,-26, 3,-21, -2, -3,-24,-26,-21,-20,-17,-10, 4, 22, 1,-22; /M: SY='N'; M= -4, 26,-16, 17, 2,-22, -3, 1,-22, -4,-29,-20, 36,-16, -1, -5, 18, 6,-22,-39,-20, 1; /M: SY='P'; M= -1, 2,-26, 6, 8,-26,-12, -7,-22, -1,-22,-16, -1, 9, 1, -5, 2, -2,-19,-28,-18, 3; /M: SY='A'; M= 10, -1,-19, -6, 0,-21, -4,-11,-19, 1,-18,-12, 2,-12, 0, -2, 8, 2,-12,-25,-16, 0; /M: SY='V'; M= 5,-20,-10,-27,-21, 4,-18,-19, 6,-19, 4, 6,-17,-21,-18,-19, -7, -3, 9,-17, -3,-19; /M: SY='E'; M= 1, -6,-13, -7, 3,-15,-17,-10,-12, -5, -9, -8, -6,-15, -3, -5, 0, 0, -6,-26,-12, 0; /M: SY='E'; M= -6, 2,-25, 4, 11,-24,-15, -6,-21, 9,-19,-12, 1, -8, 6, 8, 0, -4,-16,-27,-15, 7; /M: SY='L'; M= -8,-24,-21,-27,-20, 7,-28,-12, 17,-22, 25, 17,-22,-25,-15,-18,-20, -7, 10,-17, 6,-19; /M: SY='L'; M= -6,-18,-15,-23,-17, 12,-25,-18, 5,-21, 15, 5,-16,-22,-18,-16, -8, 9, 5,-18, 3,-17; /M: SY='G'; M= 0, -6,-29, -6,-14,-30, 59,-17,-38,-16,-29,-20, 2,-18,-15,-17, 1,-18,-29,-21,-28,-15; /M: SY='Y'; M=-14,-25,-25,-27,-20, 17,-28, -6, 3,-16, 9, 3,-23,-28,-15,-11,-22,-11, -3, 18, 31,-19; /M: SY='S'; M= -1, -2,-20, -3, 2,-20,-12, -8,-17, -3,-16,-12, 1, -5, 0, -3, 9, 8,-13,-30,-15, 0; /M: SY='P'; M= -7,-12,-28, -9, 1,-22,-17,-10,-16, 2,-17, -9, -9, 11, 2, 5, -6, -8,-15,-23,-15, -1; /M: SY='E'; M= -5, 6,-25, 11, 19,-26,-12, 0,-23, 2,-20,-14, 1, -8, 9, -4, 1, -8,-20,-27,-15, 14; /M: SY='E'; M=-10, 14,-28, 23, 38,-30,-16, -2,-27, 5,-20,-17, 3, -4, 14, -3, 0, -8,-25,-31,-18, 26; /M: SY='V'; M= -1,-25,-16,-27,-22, 1,-25,-23, 16,-21, 16, 9,-24,-23,-20,-20,-16, -6, 18,-16, -4,-22; /M: SY='I'; M= -7,-20,-21,-24,-18, -3,-28,-18, 19,-18, 13, 13,-17,-18,-14,-17,-14, -4, 14,-23, -4,-18; /M: SY='G'; M= -3, -1,-27, 0, -7,-28, 34,-10,-31,-12,-25,-17, 4,-15, -9,-14, 1,-12,-25,-25,-23, -8; /M: SY='R'; M=-10, -2,-26, -3, 3,-23,-15, -3,-22, 17,-19, -7, 2,-13, 8, 19, -4, -5,-17,-24,-10, 4; /M: SY='S'; M= -3, 2,-21, -1, -2,-17,-10, -3,-15, -5,-17, -7, 6, -8, 0, -7, 7, 2,-14,-27,-11, -2; /I: MD=-15; /M: SY='L'; M= -4, -7, -7, -8, -7, -2,-12, -8, -1,-10, 4, 0, -8,-12, -8, -8, -7, -3, -1,-11, -2, -8; D=-1; /I: I=-4; MI=-8; MD=-15; IM=-8; DM=-15; /M: SY='I'; M= -4,-23,-14,-26,-21, 6,-25,-20, 14,-20, 13, 7,-20,-21,-19,-18,-14, -6, 14,-15, -1,-20; D=-1; /I: DM=-15; /M: SY='Y'; M= -8,-16,-22,-18,-14, 1,-14, -9, -5,-11, 0, 0,-13,-23,-11, -8,-12, -8, -5, -9, 6,-14; /M: SY='E'; M= -8, 9,-24, 14, 17,-21,-15, -3,-22, -1,-17,-14, 3, -9, 5, -5, 1, -5,-19,-29,-14, 11; /M: SY='F'; M=-12,-21,-19,-25,-18, 13,-27,-10, 7,-17, 12, 7,-17,-25,-15,-10,-16, -6, 5,-14, 8,-17; /M: SY='I'; M=-10,-24,-14,-28,-22, 9,-29,-16, 12,-20, 10, 7,-20,-24,-17,-16,-15, -5, 10,-13, 6,-20; /M: SY='H'; M=-12, -2,-27, -1, -1,-17,-10, 31,-22, -7,-15, -5, 1,-13, 1, -4, -6,-12,-21,-25, 1, -2; /M: SY='P'; M= -8, -9,-32, -4, 3,-26,-16,-11,-18, -5,-22,-15, -9, 38, -4,-11, -5, -6,-22,-29,-21, -4; /M: SY='E'; M= -8, 12,-18, 18, 24,-28,-12, -3,-28, 3,-21,-18, 4,-10, 7, -3, 1, -7,-24,-31,-18, 15; /M: SY='D'; M=-10, 17,-22, 24, 5,-23, -9, -6,-25, -6,-21,-19, 6, -9, -5,-10, 2, -3,-19,-30,-13, -1; /M: SY='R'; M= -7, -9,-23, -9, -4,-14,-19, 1,-10, 0, -6, -2, -7,-19, 1, 7, -7, -6, -6,-23, -4, -3; /M: SY='E'; M= -1, 2,-23, 4, 10,-22,-10, -8,-21, -1,-18,-14, 0, -4, 1, -4, 0, -6,-18,-27,-16, 5; /M: M= -5, -7,-19, -8, 0,-14,-15, -7,-14, -2,-11, -7, -6,-13, -4, -2, -3, -3, -9,-23, -9, -3; /M: SY='V'; M= -7,-20,-18,-23,-17, 3,-23,-15, 11,-18, 11, 9,-18,-22,-16,-15,-13, -5, 12,-22, -3,-17; /M: SY='R'; M= -7, -7,-24, -8, 2,-17,-19, -4,-13, 5, -9, -3, -5,-15, 5, 9, -5, -4,-10,-23, -8, 3; /M: SY='E'; M= -3, 5,-23, 6, 14,-26,-11, -4,-25, 9,-22,-14, 4,-10, 8, 6, 2, -5,-20,-26,-14, 10; /M: M= -1,-11,-19,-14, -6,-11,-16,-12, -5, -6, -5, -1, -8,-16, -3, -5, -3, -1, -2,-23, -9, -5; /I: I=-5; MI=-8; IM=-8; DM=-15; MD=-15; /M: SY='L'; M= -9,-20,-22,-23,-16, 4,-27,-12, 12,-20, 18, 9,-18,-23,-13,-15,-16, -6, 7,-18, 3,-16; /M: SY='Q'; M=-10, 4,-25, 4, 10,-22,-14, 7,-23, 5,-20,-11, 6,-11, 12, 9, -1, -7,-22,-23, -8, 9; /M: SY='R'; M= -9, 0,-24, -2, 2,-18,-15, -2,-17, 3,-13, -7, 2,-16, 5, 7, -4, -4,-16,-22, -8, 3; /M: SY='A'; M= 11,-14,-13,-18,-14, -9,-14,-17, 1,-15, -1, -2,-13,-17,-14,-18, 0, 1, 6,-24,-10,-14; /M: SY='L'; M= -4,-24,-19,-28,-19, 0,-26,-18, 18,-20, 21, 17,-21,-23,-14,-16,-17, -6, 14,-20, -4,-18; /M: SY='E'; M= -5, 5,-25, 5, 13,-24,-15, -2,-21, 8,-19,-11, 6, -9, 9, 5, 1, -2,-19,-27,-13, 10; /M: SY='N'; M= -6, 2,-25, -1, -1,-23, 4, -3,-23, 0,-20,-12, 7,-15, -1, 1, -1, -6,-20,-26,-15, -2; /M: SY='G'; M= -6, 2,-26, 4, 5,-26, 7, -3,-27, -1,-22,-14, 3,-12, 3, -3, 0, -9,-23,-25,-16, 3; /I: E1=0; IE=-105; DE=-105;» more |
Numerical results [info]
| Total number of hits | 481 in 341 different sequences |
| Number of true positive hits | 481 in 341 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 88 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 84.53 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | K_Hofmann |
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 3 |
| Feature key [info] | DOMAIN |
| Feature description [info] | PAS |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
341 sequences
ADO1_ARATH (Q94BT6 ), ADO1_ORYSJ (Q5Z8K3 ), ADO2_ARATH (Q8W420 ), ADO2_ORYSJ (Q67UX0 ), ADO3_ARATH (Q9C9W9 ), ADO3_ORYSJ (Q2R2W1 ), AHA1_CAEEL (O02219 ), AHRR_HUMAN (A9YTQ3 ), AHRR_MOUSE (Q3U1U7 ), AHRR_RAT (Q75NT5 ), AHR_CAEEL (O44712 ), AHR_DELLE (Q95LD9 ), AHR_HUMAN (P35869 ), AHR_MOUSE (P30561 ), AHR_MUSCR (Q8R4S7 ), AHR_MUSMC (Q8R4S6 ), AHR_MUSMM (Q8R4S5 ), AHR_MUSSI (Q8R4S4 ), AHR_MUSSP (Q8R4S2 ), AHR_RABIT (O02747 ), AHR_RAT (P41738 ), ARCB_ECO57 (P58363 ), ARCB_ECOLI (P0AEC3 ), ARCB_SHIFL (P0AEC4 ), ARNT2_DANRE (Q9DG12 ), ARNT2_HUMAN (Q9HBZ2 ), ARNT2_MOUSE (Q61324 ), ARNT2_RAT (Q78E60 ), ARNT_BOVIN (Q9BE97 ), ARNT_DROME (O15945 ), ARNT_HUMAN (P27540 ), ARNT_MOUSE (P53762 ), ARNT_ONCMY (P79832 ), ARNT_RABIT (O02748 ), ARNT_RAT (P41739 ), ATOS_ECOLI (Q06067 ), BAT_HALSA (Q9HPU8 ), BDLA_PSEAE (Q9I3S1 ), BMAL1_CHICK (Q9I8T7 ), BMAL1_HORSE (A0MLS5 ), BMAL1_HUMAN (O00327 ), BMAL1_MESAU (O88529 ), BMAL1_MOUSE (Q9WTL8 ), BMAL1_NANGA (Q91YA9 ), BMAL1_PONAB (Q5R4T2 ), BMAL1_RAT (Q9EPW1 ), BMAL1_TYTAL (Q6YGZ5 ), BMAL2_CHICK (Q8QGQ7 ), BMAL2_HUMAN (Q8WYA1 ), BMAL2_MOUSE (Q2VPD4 ), BPHY_XANC8 (A0A0H2XCS3), BVGS_BORBR (P26762 ), BVGS_BORPA (P40330 ), BVGS_BORPE (P16575 ), CCKA_BRUA2 (P0DOA0 ), CEK1_SCHPO (P38938 ), CGPB_FUSSO (Q00858 ), CLOCK_CHICK (Q8QGQ6 ), CLOCK_DROME (O61735 ), CLOCK_HUMAN (O15516 ), CLOCK_MOUSE (O08785 ), CLOCK_NANGA (Q91YB0 ), CLOCK_PONAB (Q5RAK8 ), CLOCK_RAT (Q9WVS9 ), CLOCK_SPACA (Q91YB2 ), CLOCK_SPAJD (Q91YA8 ), CLOCK_TYTAL (Q6YGZ4 ), CRTJ_RHOCA (P26167 ), CYCL_DROME (O61734 ), DCTS_RHOCA (P37739 ), DCUS_ECO57 (P0AEC9 ), DCUS_ECOL6 (P59340 ), DCUS_ECOLI (P0AEC8 ), DCUS_SHIFL (P59341 ), DGCE_ECOLI (P38097 ), DHKH_DICDI (Q54W36 ), DHKL_DICDI (Q54RP6 ), DOSP_ECOLI (P76129 ), DPO3E_RHOCB (O68045 ), DSPA_SYNY3 (P20169 ), EPAS1_HUMAN (Q99814 ), EPAS1_MOUSE (P97481 ), EPAS1_RAT (Q9JHS1 ), ERT1_ASHGO (Q754V2 ), ERT1_CANAW (C4YLC3 ), ERT1_CANDC (B9WLA7 ), ERT1_CANGA (Q6FML7 ), ERT1_KLULA (Q6CKI5 ), ERT1_LACTC (C5E2K7 ), ERT1_PICST (A3LQV7 ), ERT1_POSPM (B8PBQ6 ), ERT1_YEAS1 (B3LMS3 ), ERT1_YEAS2 (C7GMR4 ), ERT1_YEAS7 (A6ZLH8 ), ERT1_YEAS8 (D3UEY7 ), ERT1_YEAST (P38140 ), ERT1_ZYGRC (C5E1J9 ), FILI_METH6 (E5KK10 ), FIXL_AZOC5 (P26489 ), FIXL_BRADU (P23222 ), FIXL_RHIME (P10955 ), GSM1_ASHGO (Q754J3 ), GSM1_CANGA (Q6FLG1 ), GSM1_CANTT (C5MCK5 ), GSM1_KLULA (Q6CK33 ), GSM1_KOMPG (C4QV17 ), GSM1_PICGU (A5DRJ2 ), GSM1_VANPO (A7TQK0 ), HIF1A_BOSMU (Q0PGG7 ), HIF1A_BOVIN (Q9XTA5 ), HIF1A_CHICK (Q9YIB9 ), HIF1A_EOSFB (Q309Z6 ), HIF1A_HUMAN (Q16665 ), HIF1A_MOUSE (Q61221 ), HIF1A_ONCMY (Q98SW2 ), HIF1A_RAT (O35800 ), HIF1A_XENLA (Q9I8A9 ), HIF1_CAEEL (G5EGD2 ), HIF3A_HUMAN (Q9Y2N7 ), HIF3A_MOUSE (Q0VBL6 ), HIF3A_RAT (Q9JHS2 ), HLH34_CAEEL (P90953 ), HTR9_HALSA (Q9HQ00 ), KCNAE_DROME (Q02280 ), KCNH1_BOVIN (O18965 ), KCNH1_HUMAN (O95259 ), KCNH1_MOUSE (Q60603 ), KCNH1_RAT (Q63472 ), KCNH2_CANLF (Q9TSZ3 ), KCNH2_HUMAN (Q12809 ), KCNH2_MOUSE (O35219 ), KCNH2_RABIT (Q8WNY2 ), KCNH2_RAT (O08962 ), KCNH3_HUMAN (Q9ULD8 ), KCNH3_MOUSE (Q9WVJ0 ), KCNH3_RAT (O89047 ), KCNH4_HUMAN (Q9UQ05 ), KCNH4_RAT (Q9R1T9 ), KCNH6_CHICK (Q9PT84 ), KINA_BACSU (P16497 ), KINC_BACSU (P39764 ), KINE_BACSU (O31661 ), LOVHK_BRUA1 (B2SB67 ), LOVHK_BRUA2 (Q2YKK7 ), LOVHK_BRUAB (Q577Y7 ), LOVHK_BRUC2 (A9MBM8 ), LOVHK_BRUME (Q8YC53 ), LOVHK_BRUO2 (A5VUS1 ), LOVHK_BRUSI (A9WYQ7 ), LOVHK_BRUSU (Q8FW73 ), LOVHK_OCHA4 (A6X554 ), LOVHK_PSE14 (Q48IV1 ), LOVHK_PSESM (Q881J7 ), LOVHK_PSEU2 (Q4ZSY3 ), LOVHK_RHIL3 (Q1M667 ), LVHK1_ERYLH (Q2NCA3 ), LVHK2_ERYLH (Q2NB77 ), LVHTH_ERYLH (Q2NB98 ), MAK1_SCHPO (Q9P7Q7 ), MSMS_METAC (Q8THF6 ), NCOA1_HUMAN (Q15788 ), NCOA1_MOUSE (P70365 ), NCOA1_PIG (Q4PJW2 ), NCOA2_DANRE (Q98TW1 ), NCOA2_HUMAN (Q15596 ), NCOA2_MOUSE (Q61026 ), NCOA2_RAT (Q9WUI9 ), NCOA2_XENLA (Q9W705 ), NCOA2_XENTR (B5DE09 ), NCOA3_HUMAN (Q9Y6Q9 ), NCOA3_MOUSE (O09000 ), NCOA3_XENLA (O57539 ), NIFL_AZOVI (P30663 ), NIFL_KLEOX (P56267 ), NIFL_KLEPN (P06772 ), NODV_BRADU (P15939 ), NPAS1_HUMAN (Q99742 ), NPAS1_MOUSE (P97459 ), NPAS2_CHICK (Q5ZQU2 ), NPAS2_HUMAN (Q99743 ), NPAS2_MOUSE (P97460 ), NPAS3_HUMAN (Q8IXF0 ), NPAS3_MOUSE (Q9QZQ0 ), NPAS4_HUMAN (Q8IUM7 ), NPAS4_MOUSE (Q8BGD7 ), NPAS4_RAT (Q8CJH6 ), NPS4A_DANRE (Q1ECW2 ), NPS4B_DANRE (E7FFX1 ), NPS4L_DANRE (P0DOC7 ), NTRB_AZOBR (P45670 ), NTRB_ECO57 (P0AFB6 ), NTRB_ECOLI (P0AFB5 ), NTRB_SHIFL (P0AFB7 ), NTRY_AZOC5 (Q04850 ), PASD1_HUMAN (Q8IV76 ), PASK_HUMAN (Q96RG2 ), PASK_MOUSE (Q8CEE6 ), PDE8A_HUMAN (O60658 ), PDE8A_MOUSE (O88502 ), PDE8B_HUMAN (O95263 ), PDE8B_MOUSE (E9Q4S1 ), PDE8_DROME (Q6NNF2 ), PDEB_SHEON (Q8EJM6 ), PDER_ECOLI (P77334 ), PDHS_BRUA1 (B2S758 ), PDHS_BRUA2 (Q2YRB4 ), PDHS_BRUAB (Q57BR6 ), PDHS_BRUC2 (A9M715 ), PDHS_BRUME (Q8YIM6 ), PDHS_BRUO2 (A5VRX4 ), PDHS_BRUSI (B0CI82 ), PDHS_BRUSU (Q8FZ86 ), PDHS_OCHA4 (A6X5X4 ), PER1_HUMAN (O15534 ), PER1_MOUSE (O35973 ), PER1_RAT (Q8CHI5 ), PER1_SPAJD (Q8K3T3 ), PER2_CHICK (Q8QGQ8 ), PER2_HUMAN (O15055 ), PER2_MOUSE (O54943 ), PER2_RAT (Q9Z301 ), PER2_SPAJD (Q8K3T2 ), PER3_HUMAN (P56645 ), PER3_MOUSE (O70361 ), PER3_RAT (Q8CJE2 ), PER_ANTPE (Q17062 ), PER_DROMA (Q03353 ), PER_DROME (P07663 ), PER_DROPS (P12348 ), PER_DROSE (Q03354 ), PER_DROSI (Q03355 ), PER_DROVI (P12349 ), PER_DROWI (Q03297 ), PER_DROYA (Q24767 ), PER_HYACE (Q25020 ), PER_MANSE (Q25478 ), PER_PERAM (Q25637 ), PHOR_ECOLI (P08400 ), PHOR_PSEAE (P23621 ), PHOR_SHIDY (P45609 ), PHOT1_ARATH (O48963 ), PHOT2_ARATH (P93025 ), PHOT2_ORYSJ (Q9ST27 ), PHOT_BACSU (O34627 ), PHOT_CHLRE (Q8LPD9 ), PHOT_LISIN (Q92DM1 ), PHOT_LISMO (P58724 ), PHT1A_ORYSJ (Q2QYY8 ), PHT1B_ORYSJ (Q2RBR1 ), PHY1_CERPU (P25848 ), PHY1_PHYPA (P36505 ), PHY1_SELMA (Q01549 ), PHY2_CERPU (Q39557 ), PHYA1_MAIZE (P19862 ), PHYA1_TOBAC (P33530 ), PHYA3_AVESA (P06593 ), PHYA4_AVESA (P06594 ), PHYA_ARATH (P14712 ), PHYA_CUCPE (P06592 ), PHYA_LATSA (P93673 ), PHYA_ORYSI (A2XLG5 ), PHYA_ORYSJ (Q10DU0 ), PHYA_PEA (P15001 ), PHYA_PETCR (P55141 ), PHYA_POPTM (O49934 ), PHYA_SOLTU (P30733 ), PHYA_SORBI (P93526 ), PHYA_SOYBN (P42500 ), PHYB1_SOLLC (Q9ZS62 ), PHYB_ARATH (P14713 ), PHYB_ORYSI (A2XFW2 ), PHYB_ORYSJ (Q10MG9 ), PHYB_SOLTU (P34094 ), PHYB_SORBI (P93527 ), PHYB_SOYBN (P42499 ), PHYB_TOBAC (P29130 ), PHYC_ARATH (P14714 ), PHYC_ORYSI (A2XM23 ), PHYC_ORYSJ (Q10CQ8 ), PHYC_SORBI (P93528 ), PHYD_ARATH (P42497 ), PHYE_ARATH (P42498 ), PHYE_IPONI (P55004 ), PHY_ADICA (P42496 ), PHY_MOUSC (P33529 ), PHY_PICAB (Q40762 ), PHY_PINSY (Q41046 ), PLEC_CAUVC (P37894 ), PPRA_PSEAE (Q9HWA7 ), PYP_HALHA (P16113 ), PYP_HALSE (P81046 ), PYP_RHOSA (Q53120 ), RCOM1_PARXL (Q13YL3 ), RSBP_BACSU (O07014 ), SIM1A_DANRE (Q98SJ5 ), SIM1_HUMAN (P81133 ), SIM1_MOUSE (Q61045 ), SIM1_PANPA (A1YFY6 ), SIM1_PANTR (A2T6X9 ), SIM2_HUMAN (Q14190 ), SIM2_MOUSE (Q61079 ), SIMA_DROME (Q24167 ), SIM_DROME (P05709 ), STC_CLOBE (P26047 ), TCSA_EMENI (Q9P896 ), TDIS_THAAR (O87939 ), TLOV1_ARATH (O64511 ), TMOS_PSEME (Q8KIY1 ), TODS_PSEP1 (A5W4E3 ), TODS_PSEPT (E0X9C7 ), TRH_DROME (Q24119 ), TYRR_ECOLI (P07604 ), WALK_STAA1 (A7WWQ7 ), WALK_STAA2 (A6TXG9 ), WALK_STAA3 (Q2FKN7 ), WALK_STAA8 (Q2G2U4 ), WALK_STAA9 (A5INR0 ), WALK_STAAB (Q2YUQ2 ), WALK_STAAC (Q5HJX6 ), WALK_STAAE (A6QD58 ), WALK_STAAM (Q7A305 ), WALK_STAAN (Q7A8E0 ), WALK_STAAR (Q6GKS6 ), WALK_STAAS (Q6GD71 ), WALK_STAAT (A8YYU2 ), WALK_STAAU (Q9RDT3 ), WALK_STAAW (Q7A215 ), WALK_STAEQ (Q5HK19 ), WALK_STAES (Q8CU87 ), WALK_STAHJ (Q4LAJ8 ), WALK_STAS1 (Q4A159 ), WALK_STASR (A5A2P0 ), WC1_NEUCR (Q01371 ), WC2_NEUCR (P78714 ), Y3085_AZOC5 (Q04855 ), Y4LL_SINFN (P55552 ), Y8013_DICDI (Q54VU4 ), YCF26_PORPU (P51392 ), YCF26_PYRYE (Q1XD95 ), YGEV_ECOLI (Q46802 ), YQIR_BACSU (P54529 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
88 sequences
ACUK_CHAGB (Q2GSA4 ), ACUK_NECH7 (C7YM38 ), ACUK_NEUCR (Q7RUA4 ), ACUK_PHANO (Q0U7C8 ), ACUK_PYRTR (B2W978 ), ACUK_SCLS1 (A7EAG1 ), ACUK_SORMK (D1ZRZ5 ), BPHY_DEIRA (Q9RZA4 ), CAR_HALS3 (B0R9Z1 ), CITA_KLEPN (P52687 ), CITS_BACHD (Q9RC53 ), CITS_BACSU (O34427 ), DCRA_DESVH (P35841 ), DCTS_BACHD (Q9K997 ), DCTS_BACSU (P96601 ), DGCM_ECO57 (Q8X8Q3 ), DGCM_ECOLI (P77302 ), DHAR_CITFR (P45512 ), DHAR_ECOLI (P76016 ), DHKA_DICDI (Q54U87 ), DHKD_DICDI (Q54SP4 ), DHKI_DICDI (Q86AT9 ), DPIB_ECOLI (P77510 ), ERT12_YARLI (Q6C764 ), ERT1_COPC7 (A8N767 ), ERT1_DEBHA (Q6BY37 ), ERT1_KOMPG (C4R1K8 ), ERT1_PICGU (A5DF43 ), ERT1_SCHCM (D8Q8R5 ), ERT1_USTMA (Q4PD88 ), GSM1_CLAL4 (C4Y4V1 ), GSM1_DEBHA (Q6BJW8 ), GSM1_LODEL (A5DU46 ), GSM1_PICST (A3LWY2 ), GSM1_YEAS1 (B3LQ10 ), GSM1_YEAS2 (C7GR11 ), GSM1_YEAS7 (A6ZQM3 ), GSM1_YEAS8 (C8ZBB1 ), GSM1_YEAST (P42950 ), GSM1_ZYGRC (C5DX31 ), KCNH5_HUMAN (Q8NCM2 ), KCNH5_MOUSE (Q920E3 ), KCNH5_RAT (Q9EPI9 ), KCNH6_HUMAN (Q9H252 ), KCNH6_RAT (O54853 ), KCNH7_HUMAN (Q9NS40 ), KCNH7_MOUSE (Q9ER47 ), KCNH7_RAT (O54852 ), KCNH8_HUMAN (Q96L42 ), KCNH8_MOUSE (P59111 ), KCNH8_RAT (Q9QWS8 ), KINB_PSEAI (O34206 ), MALK_BACSU (O05250 ), NTRB_BRASR (P10578 ), NTRB_KLEOX (P06218 ), NTRB_PROHU (P28788 ), NTRB_RHIME (Q52977 ), NTRB_RHOCB (P09431 ), NTRB_SALTI (P0A2E0 ), NTRB_SALTY (P0A2D9 ), NTRB_VIBAL (P19906 ), NTRY_AZOBR (P45675 ), PER_CAEEL (Q65ZG8 ), PHOR_BACSU (P23545 ), PHOR_HAEIN (P71380 ), PHOR_KLEPN (P45608 ), PHY1_SYNY3 (Q55168 ), PILS_PSEAE (P33639 ), PPK31_SCHPO (O94324 ), PSK1_YEAST (P31374 ), PYP_RHOCB (O69138 ), PYP_RHOS4 (Q53226 ), RCOM2_PARXL (Q13IY4 ), RCOM_RHORT (Q2RNI6 ), RCSC_ECOLI (P0DMC5 ), RCSC_ECOLX (P0DMC6 ), RCSC_SALTI (Q56128 ), RCSC_SALTY (P58662 ), RESE_BACSU (P35164 ), ROCR_BACSU (P38022 ), SPHS_SYNE7 (P39664 ), TYRR_CITBR (O54426 ), TYRR_ENTAG (Q9ZIB7 ), TYRR_SALTI (P0A2D8 ), TYRR_SALTY (P0A2D7 ), WALK_BACSU (Q45614 ), Y091_CAUVC (Q9ABX9 ), YKOW_BACSU (O34311 )» more |
| PDB [Detailed view] |
228 PDB
1BYW; 1D06; 1D7E; 1DP6; 1DP8; 1DP9; 1DRM; 1EW0; 1F98; 1F9I; 1GSV; 1GSW; 1GSX; 1KOU; 1LL8; 1LSV; 1LSW; 1LSX; 1LT0; 1N9L; 1N9N; 1N9O; 1NWZ; 1ODV; 1OJ5; 1OT6; 1OT9; 1OTA; 1OTB; 1OTD; 1OTE; 1OTI; 1P97; 1S1Y; 1S1Z; 1S4R; 1S4S; 1S66; 1S67; 1T18; 1T19; 1T1A; 1T1B; 1T1C; 1TS0; 1TS6; 1TS7; 1TS8; 1UGU; 1UWN; 1UWP; 1V9Y; 1V9Z; 1VB6; 1WA9; 1X0O; 1XFN; 1XFQ; 1XJ2; 1XJ3; 1XJ4; 1XJ6; 1Y28; 2A24; 2B02; 2CMN; 2D01; 2D02; 2GJ3; 2HV1; 2I9V; 2JHE; 2K7S; 2KDK; 2KX6; 2L0W; 2L1M; 2L4R; 2MWG; 2OWH; 2OWJ; 2PHY; 2PR5; 2PR6; 2PYP; 2PYR; 2QJ5; 2QJ7; 2QWS; 2VEA; 2VLG; 2VV6; 2VV7; 2VV8; 2W0N; 2Z6C; 2Z6D; 2ZOH; 2ZOI; 3F1N; 3F1O; 3F1P; 3GDI; 3GEC; 3H7W; 3H82; 3P7N; 3PHY; 3PYP; 3RTY; 3T50; 3UMD; 3UME; 3VE3; 3VE4; 3ZQ5; 4B9O; 4BBT; 4BBU; 4BBV; 4DJ2; 4DJ3; 4EEP; 4EER; 4EES; 4EET; 4EEU; 4EQ1; 4F3L; 4GCZ; 4GHI; 4GS9; 4H6J; 4HHD; 4HOI; 4HP9; 4HQA; 4HY8; 4I38; 4I39; 4I3A; 4I3I; 4I3J; 4LLO; 4LPZ; 4LRX; 4LRY; 4LRZ; 4M4X; 4MN5; 4MN6; 4NXB; 4NXE; 4NXF; 4NXG; 4PKY; 4R38; 4R3A; 4WL9; 4WLA; 4WN5; 4XT2; 4ZP4; 4ZPH; 4ZPK; 4ZPR; 4ZQD; 5AKP; 5F5Y; 5F68; 5F69; 5F6A; 5GX9; 5HD3; 5HD5; 5HDC; 5HDD; 5HDS; 5HWT; 5HWV; 5HWW; 5J7E; 5K7L; 5KIZ; 5NJ8; 5NWM; 5NWX; 5SVG; 5SVU; 5SVV; 5SVW; 5SY5; 5SY7; 5TBM; 5UFP; 5UYR; 5V0L; 5VA1; 5VA2; 5VA3; 5Y7W; 5Y7Y; 6CZW; 6D09; 6D0B; 6D0C; 6E3S; 6E3T; 6E3U; 6GPU; 6GPV; 6MHI; 6MHN; 6MKT; 6MMD; 6P4I; 6P5D; 6P5E; 6P5F; 6P5G; 6PBX; 6PBY; 6QPJ; 6QQH; 6QQI; 6QQJ; 6QQK; 6QSA » more |
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