PROSITE entry PS50137
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General information about the entry
Entry name [info] | DS_RBD |
Accession [info] | PS50137 |
Entry type [info] | MATRIX |
Date [info] |
01-DEC-2001 CREATED;
10-MAY-2017 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC50137 |
Associated ProRule [info] | PRU00266 |
Name and characterization of the entry
Description [info] | Double stranded RNA-binding domain (dsRBD) profile. |
Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=69; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=64; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.5994000; R2=0.0242763; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=2441.8774414; R2=4.2387094; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=285; H_SCORE=3650; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=202; H_SCORE=3298; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: D=-20; I=-20; B1=-60; E1=-60; MI=-105; MD=-105; IM=-105; DM=-105; ... A B C D E F G H I K L M N P Q R S T V W Y Z /I: B1=0; BI=-105; BD=-105; /M: SY='N'; M= -9, 24,-22, 20, 4,-20, -9, 7,-24, -2,-24,-18, 27,-15, 0, -3, 7, 2,-23,-34,-13, 2; /M: SY='P'; M= -2,-19,-26,-17,-10,-14,-17,-14,-11,-12,-17,-11,-18, 31,-12,-18, -8, -8,-15,-15, -7,-14; /M: SY='V'; M= -7,-17,-20,-20,-13,-12,-27,-20, 7, 3, -2, 6,-15,-16,-10, -4,-13, -5, 10,-24, -8,-13; /M: SY='S'; M= -4, 1,-19, 1, 2,-23, -4,-10,-21, 0,-20,-12, 3,-14, 0, 0, 6, 1,-15,-29,-17, 0; /M: M= -1,-13,-22,-14, -3,-10,-15,-13, -9, -1, -4, -2,-11,-14, -3, 0, -7, -6, -6,-20,-10, -3; /M: SY='L'; M= -9,-30,-19,-30,-22, 8,-30,-21, 23,-28, 42, 21,-29,-29,-20,-20,-27, -9, 16,-21, -1,-21; /M: SY='N'; M= -8, 6,-23, -2, -1,-14,-15, 9,-10, -4,-10, -1, 13,-19, 8, -3, -3, -6,-17,-23, -2, 2; /M: SY='E'; M= -2, 5,-26, 9, 28,-26,-16, -4,-23, 7,-18,-13, -1, -7, 14, 0, 2, -6,-21,-26,-14, 20; /M: SY='F'; M=-13,-26,-16,-30,-23, 23,-28,-14, 4,-22, 13, 3,-23,-29,-21,-18,-21,-10, 0, 8, 22,-22; /M: SY='A'; M= 6,-13, -2,-19,-12,-10,-12,-16, -8,-11, -5, -2, -9,-19,-11,-12, -3, -4, -4,-25,-13,-11; /I: MD=-25; /M: SY='Q'; M= -8, -1,-25, -1, 13,-27,-12, 2,-21, 8,-17, -6, 1,-11, 26, 11, -1, -5,-22,-21,-11, 18; D=-4; /I: I=-5; MI=0; MD=-15; IM=0; DM=-15; /M: SY='K'; M= -9, -5,-25, -7, 2,-16,-15, -4,-16, 14,-15, -3, -2,-15, 4, 12, -5, -6,-13,-20, -5, 2; D=-4; /I: DM=-15; /M: SY='R'; M= -8, -6,-25, -8, -1,-15,-16, 1,-13, 2, -8, -4, -3,-17, 1, 5, -7, -5,-12,-22, -4, -1; /M: SY='R'; M= -7, -4,-27, -4, -3,-19, -3, -9,-21, 4,-14,-10, -2,-18, -1, 6, -7,-10,-18,-14,-10, -3; /M: SY='M'; M=-11,-17,-24,-20,-11, -1,-21,-14, -1, -9, -3, 1,-12, -7, -8, -5,-13, -9, -4,-19, -6,-11; /M: SY='T'; M= -4, -2,-23, -4, 0,-19,-11, -4,-15, -5,-12, -8, 0,-11, 0, -4, 1, 2,-13,-27,-12, -1; /M: SY='P'; M= -7,-21,-14,-20,-15,-13,-22,-19, -1,-17, -2, -2,-21, 10,-17,-19,-14, -8, -1,-24,-15,-18; /M: SY='E'; M= -8, 6,-22, 4, 9,-19,-17, -1,-15, 0,-16,-10, 8,-12, 5, -2, 4, 4,-14,-29,-12, 6; /M: SY='Y'; M=-19,-23,-27,-25,-21, 42,-29, 5, -1,-16, 3, -1,-20,-29,-19,-13,-19,-10, -8, 23, 58,-21; /M: SY='E'; M=-11, 1,-27, 4, 13,-22,-15, -7,-22, 13,-15,-11, -1,-13, 4, 11, -5, -6,-17,-24,-11, 8; /M: SY='L'; M=-10,-15,-22,-15,-11, -2,-27,-16, 8,-17, 13, 5,-17,-22,-12,-16,-14, -3, 6,-18, -1,-12; /M: SY='V'; M= -6,-15,-12,-18,-13, -8,-26,-19, 7,-12, 3, 1,-13,-21,-13,-11, -7, 0, 10,-26, -7,-14; /I: MD=-21; /M: SY='E'; M= -2, 0,-24, 3, 10,-24,-15, -6,-17, 1,-18,-12, -1, 0, 6, -4, 3, -3,-15,-28,-15, 7; D=-4; /I: MD=-21; /M: SY='E'; M= -6, 4,-20, 6, 15,-20,-12, -3,-16, 6,-13, -9, 1, -7, 10, 2, -1, -3,-15,-20,-11, 12; D=-4; /I: I=-2; MI=0; MD=-21; IM=0; DM=-21; /M: SY='T'; M= -2, -6,-15, -6, 0,-14,-11,-11, -9, -6,-11, -8, -3, -1, -3, -6, 7, 8, -5,-24,-13, -2; D=-4; /I: DM=-21; /M: SY='G'; M= 0, -3,-22, -5,-11,-22, 38,-13,-28,-13,-23,-16, 5,-15,-12,-12, 4, -8,-21,-21,-22,-12; D=-4; /I: DM=-21; /M: SY='P'; M= -5, -8,-26, -5, 1,-21,-11,-12,-14, -7,-16,-11, -7, 24, -4,-11, -3, -4,-16,-26,-19, -3; D=-4; /I: DM=-21; /M: SY='A'; M= 5, -3,-22, -1, 1,-23, -4,-12,-17, -6,-20,-14, -3, 1, -5,-12, 5, -3,-11,-29,-20, -3; /M: SY='H'; M=-13, 2,-27, -1, -4,-20, -3, 41,-25, -6,-18, -5, 10,-19, 2, -1, -5,-13,-25,-28, 0, -3; /M: SY='E'; M= -3, 0,-18, 1, 3,-24,-13, -6,-22, 1,-19,-12, 0, -3, 3, 2, 2, -1,-18,-29,-16, 1; /M: SY='P'; M=-11, -7,-26, -6, 5,-24,-20, -2,-18, 6,-20, -8, -5, 10, 8, 5, -7, -9,-19,-25,-13, 4; /M: SY='R'; M= -9, -6,-25, -6, 2,-19,-11, -6,-17, 6,-16, -8, -1,-13, 3, 12, -1, -3,-13,-24,-11, 1; /M: SY='F'; M=-18,-27,-14,-35,-27, 59,-29,-16, -2,-27, 5, -2,-19,-29,-33,-19,-17, -8, -1, 8, 26,-27; /M: SY='T'; M= -5,-15,-19,-20,-13, -6,-26,-16, 8,-12, 7, 6,-14,-19,-10,-12, -5, 9, 9,-24, -4,-13; /M: SY='V'; M= -1,-21, 7,-28,-22, 5,-24,-18, 4,-19, 1, 5,-19,-25,-20,-19,-10, -4, 9,-20, -1,-21; /M: SY='E'; M= -5, -3,-10, -4, 10,-21,-20, -4,-18, 1,-17,-10, -2,-13, 7, -1, 2, 0,-15,-27,-10, 8; /M: SY='V'; M= -3,-26, 13,-29,-25, -4,-28,-25, 12,-22, 11, 7,-25,-30,-24,-20,-14, -5, 21,-30,-12,-25; /M: SY='R'; M= -7, -9,-23,-11, -3, -8,-22,-13, -6, -1, -8, -4, -8,-16, -5, 1, -4, -1, -3,-19, -6, -4; /M: SY='V'; M= -4,-24,-18,-29,-25, 1,-27,-25, 25,-22, 14, 12,-21,-24,-22,-21,-11, -1, 27,-25, -6,-24; /M: SY='G'; M= -8, 10,-24, 12, 2,-26, 13, -7,-30, -6,-27,-20, 10, -9, -4,-10, 2, -9,-26,-28,-18, -2; /M: SY='G'; M= -4, -2,-26, 0, -2,-27, 14,-12,-24, -8,-22,-14, 0, -7, -3,-11, 2, -8,-19,-26,-21, -3; /M: SY='Q'; M= -5, -9,-24,-12, -2,-12,-21, -8, -7, 0, -9, -4, -5,-13, 2, 2, -4, -2, -7,-21, -6, -2; /M: SY='T'; M= -4, -4,-22, -6, 5,-16,-17,-13,-12, -2,-14, -9, -4, -6, -1, -6, 2, 6, -9,-23,-13, 1; /I: MD=-17; /M: SY='Y'; M=-12,-17,-19,-18,-15, 22,-23, -4, 2,-13, 5, 1,-15,-19,-16,-11,-14, -7, 0, 0, 23,-16; D=-3; /I: I=-5; MI=0; MD=-17; IM=0; DM=-17; /M: SY='G'; M= 5, -7, -6, -9, -8,-18, 6,-16,-19,-11,-18,-14, -6, -1,-11,-14, 3, -3,-13,-23,-19,-10; D=-3; /I: DM=-17; /M: SY='E'; M= -5, -6,-22, -7, 4,-16,-19, -3,-13, 1,-13, -6, -5,-11, 0, 3, 1, 3, -7,-26,-10, 1; /M: SY='G'; M= 9,-10,-24,-12,-14,-24, 41,-19,-28,-16,-22,-16, -4,-17,-17,-19, 2,-12,-18,-21,-25,-15; /M: SY='S'; M= -3, -1,-14, -4, -2,-15,-16, -8,-11, -6,-15, -9, 1,-16, -4, -8, 5, 4, -7,-26,-10, -3; /M: SY='G'; M= 7, -8,-25, -9,-15,-27, 49,-18,-33,-16,-27,-19, 1,-18,-15,-16, 6,-12,-24,-23,-27,-15; /M: SY='T'; M= -3, -6,-18, -8, -5,-16,-13,-10,-17, -2,-20,-12, 0, -1, -4, 1, 8, 9,-12,-28,-13, -6; /M: SY='S'; M= 1, 12,-15, 4, -2,-19, -2, -5,-19, -5,-27,-18, 23,-13, -1, -5, 24, 15,-15,-37,-18, -2; /M: SY='K'; M=-11, -4,-26, -5, 4,-24,-21, -8,-23, 34,-22, -7, -3,-13, 7, 24,-10, -9,-16,-20, -7, 5; /M: SY='K'; M=-11, -1,-30, 0, 12,-30,-18, -7,-29, 39,-27,-10, 0,-11, 15, 29, -8,-10,-22,-21,-11, 13; /M: SY='E'; M= -5, 3,-23, 7, 11,-21,-19, -8,-12, -2,-11,-10, -2,-13, 1, -6, -1, -3, -8,-29,-14, 5; /M: SY='A'; M= 44, -9,-11,-18, -9,-20, 1,-19,-12,-10,-13,-11, -8, -9, -9,-19, 12, 1, -2,-22,-20, -9; /M: SY='K'; M= -7, 0,-29, 0, 14,-29,-14, -4,-28, 29,-25,-11, 0,-10, 14, 21, -5,-10,-22,-22,-12, 14; /M: SY='Q'; M= -2, 0,-24, -5, 2,-24,-12, 3,-15, 3,-16, -6, 6,-15, 16, 5, 1, -5,-17,-25,-11, 8; /M: SY='N'; M= -4, 4,-22, 1, -1,-17,-15, -1,-13, -2,-10, -7, 6,-17, -1, 1, -2, -3,-12,-27, -9, -2; /M: SY='A'; M= 41,-12, 4,-22,-13,-19, -5,-22,-10,-13,-10,-10,-12,-14,-13,-21, 7, -1, 1,-24,-21,-13; /M: SY='A'; M= 48,-10, -7,-20,-11,-20, -1,-20,-11,-11,-10,-10,-10,-11,-11,-20, 9, 0, 0,-21,-20,-11; /M: SY='K'; M= -7, -7,-24, -7, 5,-17,-20, -7,-12, 8, -9, -2, -8,-15, 3, 6, -7, -5, -8,-21, -9, 3; /M: SY='B'; M= -7, 7,-24, 7, 6,-21,-15, -6,-18, 5,-14,-10, 5,-15, 3, 4, -2, -5,-16,-28,-13, 4; /M: SY='A'; M= 24,-18,-15,-26,-17, -3,-13,-19, 4,-16, 3, 2,-16,-17,-15,-20, -3, -3, 7,-17, -8,-16; /M: SY='L'; M= -9,-28,-13,-30,-23, 9,-30,-19, 17,-25, 30, 15,-28,-30,-21,-19,-24, -8, 15,-15, 4,-22; /M: SY='Q'; M=-12, 5,-28, 7, 15,-28,-18, -1,-23, 14,-19, -9, 4,-12, 19, 16, -4, -7,-21,-25,-13, 16; /M: SY='Q'; M= -7, -7,-26, -7, 1,-14,-23, -5, -6, 3, -8, -3, -8,-16, 4, -2, -9, -9, -7,-16, 3, 1; /M: SY='L'; M=-10,-28,-21,-30,-20, 9,-29,-19, 18,-25, 38, 21,-27,-28,-18,-18,-26, -9, 10,-16, 1,-19; /M: M= -7, -7,-24, -7, -6, -8,-11, -7,-10, -6, -6, -4, -7,-19, -7, -7, -8, -9, -7,-20, -4, -7; /M: M= -8, -5,-22, -7, -3,-17,-12, -1,-14, -2,-10, -4, -3,-14, -1, 0, -5, -4,-13,-23, -7, -3; /I: E1=0; IE=-105; DE=-105;» more |
Numerical results [info]
Total number of hits | 756 in 638 different sequences |
Number of true positive hits | 755 in 637 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 1 |
Number of false negative sequences | 59 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 99.87 % |
Recall (true positives / (true positives + false negatives)) | 92.75 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
Maximum number of repetitions [info] | 5 |
Matrix type [info] | protein_domain |
Scaling database [info] | reversed |
Author [info] | K_Hofmann |
Feature key [info] | DOMAIN |
Feature description [info] | DRBM |
Version [info] | 5 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
637 sequences
340R_IIV6 (Q91FI4), A464_PBCV1 (Q98514), ADAD1_HUMAN (Q96M93), ADAD1_MOUSE (Q5SUE7), ADAD1_RAT (Q3KR54), ADAD1_XENLA (Q32NG0), ADAD2_HUMAN (Q8NCV1), ADAD2_MACFA (Q95JV3), ADAD2_MOUSE (Q9D5P4), ADAR_DROME (Q9NII1), ADR1_CAEEL (Q9U3D6), CARF_HUMAN (Q9NXV6), CARF_MOUSE (Q8BI72), CARF_RAT(Q5U2X0), CPL1_ARATH (Q5YDB6), CPL2_ARATH (Q5YDB5), DCL1_ARATH (Q9SP32), DCL1_CHAGB (Q2H0G2), DCL1_ORYSJ (Q8LMR2), DCL2A_ORYSJ (Q10HL3), DCL2B_ORYSJ (Q69LX2), DCL2_ARATH (Q3EBC8), DCL2_NEUCR (Q7SCC1), DCL2_PYRO7 (A4RHU9), DCL4_ARATH (P84634), DCL4_ORYSJ (A7LFZ6), DCR1_CAEEL (P34529), DCR1_DROME (Q9VCU9), DCR2_DROME (A1ZAW0), DGCR8_BOVIN (A6QR44), DGCR8_HUMAN (Q8WYQ5), DGCR8_MOUSE (Q9EQM6), DHX9_BOVIN (Q28141), DHX9_CAEEL (Q22307), DHX9_HUMAN (Q08211), DHX9_MOUSE (O70133), DHX9_PONAB (Q5R874), DHX9_XENLA (Q68FK8), DICER_BOVIN (Q6TUI4), DICER_CHICK (Q25BN1), DICER_CRIGR (A0MQH0), DICER_DANRE (Q6TV19), DICER_HUMAN (Q9UPY3), DICER_MOUSE (Q8R418), DICER_XENTR (B3DLA6), DRB1_ARATH (O04492), DRB1_ORYSJ (Q5N8Z0), DRB2_ARATH (Q9SKN2), DRB2_ORYSJ (Q0DKP4), DRB3_ARATH (Q9LJF5), DRB3_ORYSJ (Q0DJA3), DRB4_ARATH (Q8H1D4), DRB4_ORYSJ (Q6YW64), DRB5_ARATH (Q8GY79), DRB5_ORYSJ (B7E321), DRB6_ORYSJ (Q9AV50), DRB7_ORYSJ (Q0IV63), DRB8_ORYSJ (Q0IQN6), DSRAD_CAEEL (Q22618), DSRAD_HUMAN (P55265), DSRAD_MOUSE (Q99MU3), DSRAD_RAT (P55266), E2AK2_HUMAN (P19525), E2AK2_MOUSE (Q03963), E2AK2_RAT (Q63184), E3_YLDV (Q9DHS8), ILF3A_XENLA (Q91550), ILF3B_XENLA (Q6DD04), ILF3_DANRE (Q6NXA4), ILF3_HUMAN (Q12906), ILF3_MOUSE (Q9Z1X4), ILF3_RAT(Q9JIL3), ILF3_XENTR (Q6GL57), LOQS_DROME (Q9VJY9), MLE_DROME (P24785), NS5_BANNV (Q9YIT9), NSP1N_ROTB2 (Q0H8C5), NSP1N_ROTJ1 (Q45UF6), NSP3_ROTBS (P34717), NSP3_ROTHC (Q9PY95), NSP3_ROTPC (P27586), PAC1_SCHPO (P22192), PG065_MONPV (A0A7H0DN38), PG065_VACCC (P21081), PG065_VACCW (P21605), PG065_VAR67 (P33863), POLN_DCVEB (O36966), PRKAA_XENLA (Q7ZYA5), PRKAB_XENLA (Q91836), PRKRA_BOVIN (Q2HJ92), PRKRA_DANRE (B0V3F8), PRKRA_HUMAN (O75569), PRKRA_MOUSE (Q9WTX2), PRKRA_RAT (Q4V8C7), RED1_HUMAN (P78563), RED1_MOUSE (Q91ZS8), RED1_RAT(P51400), RED2_HUMAN (Q9NS39), RED2_MOUSE (Q9JI20), RED2_RAT(P97616), REH2_TRYB2 (Q581T1), RM03_YEAST (P36516), RM44_HUMAN (Q9H9J2), RM44_MOUSE (Q9CY73), RM44_PONAB (Q5REY8), RNC1_NOSS1 (Q8Z023), RNC1_SYNY3 (P74368), RNC2_NOSS1 (Q8YPT4), RNC2_SYNY3 (Q55637), RNC_ACIAD (Q6F9C2), RNC_ACIB3 (B7GYT0), RNC_ACIBS (B0VTM5), RNC_ACIBT (A3M7P2), RNC_ACIBY (B0VCU0), RNC_ACIP2 (F0KKL2), RNC_ACTP2 (A3MZQ9), RNC_ACTPJ (B0BUA6), RNC_ACTSZ (A6VLV8), RNC_AGRFC (Q8UGK2), RNC_ALBFT (Q21XN1), RNC_ALCBS (Q0VP19), RNC_ALIB4 (A8EV88), RNC_ALIF1 (Q5E314), RNC_ALKEH (Q0A8Z1), RNC_ALLAM (B9JUN7), RNC_ANAMF (B9KGT5), RNC_ANAMM (Q5P9U8), RNC_ANAPZ (Q2GIW0), RNC_ANOFW (B7GGE9), RNC_AQUAE (O67082), RNC_AROAE (Q5P086), RNC_AYWBP (Q2NJY3), RNC_AZOC5 (A8I3B5), RNC_AZOPC (B6YQI6), RNC_AZOVD (C1DQS2), RNC_BACAA (C3P5Q0), RNC_BACAC (C3L778), RNC_BACAN (Q81WI8), RNC_BACC0 (B7JJT6), RNC_BACC1 (Q732M1), RNC_BACC2 (B7IUK8), RNC_BACC3 (C1EP73), RNC_BACC4 (B7HDX2), RNC_BACC7 (B7HLI2), RNC_BACCN (A7GRH9), RNC_BACCQ (B9IVD8), RNC_BACCR (Q819V8), RNC_BACCZ (Q636H7), RNC_BACFN (Q5LIS2), RNC_BACFR (Q64ZV9), RNC_BACHK (Q6HEW6), RNC_BACLD (Q65JQ5), RNC_BACMK (A9VT87), RNC_BACSU (P51833), RNC_BACTN (Q8A2E8), RNC_BACVZ (A7Z4L3), RNC_BARBK (A1US36), RNC_BARHE (Q6G459), RNC_BARQU (Q6G082), RNC_BART1 (A9IRN0), RNC_BDEBA (Q6MLR5), RNC_BIFLO (Q8G7H1), RNC_BLOFL (Q7VRR0), RNC_BLOPB (Q492D1), RNC_BORA1 (Q2KWY0), RNC_BORAP (Q0SMF0), RNC_BORBR (Q7WD32), RNC_BORBU (O51648), RNC_BORGP (Q660G7), RNC_BORPA (Q7W5J6), RNC_BORPD (A9IIJ2), RNC_BORPE (Q7VW39), RNC_BRADU (O69161), RNC_BRUA1 (B2SAD9), RNC_BRUA2 (Q2YN02), RNC_BRUAB (Q57E81), RNC_BRUC2 (A9MA35), RNC_BRUMB (C0RI03), RNC_BRUME (P66664), RNC_BRUSI (B0CKY7), RNC_BRUSU (P66665), RNC_BUCA5 (B8D951), RNC_BUCAI (P57346), RNC_BUCAP (Q8K9R1), RNC_BUCAT (B8D7F5), RNC_BUCBP (P59476), RNC_BUCCC (Q057R4), RNC_CAEBR (Q61XX9), RNC_CAEEL (O01326), RNC_CALS4 (Q8R9W3), RNC_CAMC1 (A8Z6F6), RNC_CAMC5 (A7H186), RNC_CAMFF (A0RRM7), RNC_CAMJ8 (A8FNU7), RNC_CAMJD (A7H5Y2), RNC_CAMJE (Q9PM40), RNC_CAMJR (Q5HSF8), RNC_CARHZ (Q3AC58), RNC_CAUSK (B0T3I0), RNC_CAUVC (Q9A805), RNC_CAUVN (B8H627), RNC_CERS1 (A3PGF8), RNC_CERS4 (Q3J5W1), RNC_CERS5 (A4WVP5), RNC_CERSK (B9KSA7), RNC_CHLAA (A9WJ69), RNC_CHLAB (Q5L6E3), RNC_CHLAD (B8GAM6), RNC_CHLCH (Q3AQ14), RNC_CHLCV (Q823R4), RNC_CHLFF (Q253V2), RNC_CHLL3 (Q3B6L3), RNC_CHLMU (Q9PK97), RNC_CHLPN (Q9Z9C7), RNC_CHLSY (B9LB70), RNC_CHLT2 (B0B7L3), RNC_CHLTA (Q3KM65), RNC_CHLTB (B0BBS8), RNC_CHLTE (Q8KAN7), RNC_CHLTR (O84299), RNC_CHRVO (Q7NWC4), RNC_CLOAB (Q97IA4), RNC_CLOB8 (A6LSM2), RNC_CLOBA (B2V4D6), RNC_CLOBB (B2TJ22), RNC_CLOK1 (B9E1G8), RNC_CLOK5 (A5N807), RNC_CLOPE (Q8XJN8), RNC_CLOTE (Q895M9), RNC_COLP3 (Q47WP5), RNC_CORDI (Q6NGH3), RNC_COREF (Q8FP16), RNC_CORGL (Q8NNV6), RNC_CORJK (Q4JUY7), RNC_COXB1 (B6J4J9), RNC_COXB2 (B6IYZ9), RNC_COXBN (A9KFA0), RNC_COXBR (A9N942), RNC_COXBU (P51837), RNC_CUPMC (Q1LKN1), RNC_CUPNH (Q0K8N3), RNC_CUPPJ (Q46Z18), RNC_CUPTR (B3R1Z9), RNC_DECAR (Q47EF7), RNC_DEHM1 (Q3Z7Q8), RNC_DEHMC (Q3ZXY9), RNC_DELAS (A9BNJ5), RNC_DESPS (Q6ANV0), RNC_DESRM (A4J683), RNC_DINSH (A8LLD9), RNC_ECO24 (A7ZQ11), RNC_ECO27 (B7UH07), RNC_ECO45 (B7MIQ2), RNC_ECO55 (B7LDG0), RNC_ECO57 (P0A7Y2), RNC_ECO5E (B5Z141), RNC_ECO7I (B7NRM0), RNC_ECO81 (B7MYJ8), RNC_ECO8A (B7M8I0), RNC_ECOBW (C4ZYJ0), RNC_ECODH (B1XB41), RNC_ECOHS (A8A377), RNC_ECOK1 (A1AE97), RNC_ECOL5 (Q0TES1), RNC_ECOL6 (P0A7Y1), RNC_ECOLC (B1IVR0), RNC_ECOLI (P0A7Y0), RNC_ECOLU (B7N6F5), RNC_ECOSE (B6I5E1), RNC_ECOSM (B1LP80), RNC_ECOUT (Q1R8G6), RNC_EDWI9 (C5B8Y2), RNC_EHRCJ (Q3YQX7), RNC_EHRCR (Q2GFE4), RNC_EHRRG (Q5FGH0), RNC_EHRRW (Q5HA74), RNC_ENT38 (A4WDD8), RNC_ENTFA (Q82ZG1), RNC_ERWT9 (B2VI46), RNC_ESCF3 (B7LUZ7), RNC_FLAPJ (A6GW45), RNC_FRAP2 (B0TXH8), RNC_FRAT1 (Q14G66), RNC_FRATF (A7NAR0), RNC_FRATH (Q2A4N2), RNC_FRATM (B2SFY4), RNC_FRATN (A0Q7W6), RNC_FRATO (Q0BN07), RNC_FRATT (Q5NER3), RNC_FRATW (A4IWK9), RNC_FUSNN (Q8RGX3), RNC_GEOKA (Q5L0Q3), RNC_GEOMG (Q39T82), RNC_GEOSL (Q74AX1), RNC_GEOSW (C5D8T6), RNC_GEOTN (A4IM67), RNC_GLAP5 (B8F3C7), RNC_GLOVI (Q7NH89), RNC_HAEDU (Q7VL75), RNC_HAEI8 (Q4QPN0), RNC_HAEIE (A5UBC4), RNC_HAEIG (A5UFI8), RNC_HAEIN (P44441), RNC_HAHCH (Q2SL32), RNC_HALH5 (Q9KA05), RNC_HAMD5 (C4K3Z3), RNC_HELAH (Q17XJ6), RNC_HELHP (Q7VIA9), RNC_HELMI (B0TGW4), RNC_HELP2 (B6JLQ0), RNC_HELPG (B5Z735), RNC_HELPJ (Q9ZLH2), RNC_HELPS (B2UTG4), RNC_HELPY (P56118), RNC_HISS2 (B0USS1), RNC_HUMAN (Q9NRR4), RNC_HYDS0 (B4U7T8), RNC_IDILO (Q5R106), RNC_IIV6(O55748), RNC_JANSC (Q28V23), RNC_KLEP3 (B5XNH0), RNC_KLEP7 (A6TCI1), RNC_LACAC (Q5FJJ7), RNC_LACJO (Q74IP8), RNC_LACLA (Q9CHD0), RNC_LACLM (A2RLZ8), RNC_LACLS (Q030F9), RNC_LACPL (Q88WK0), RNC_LATSS (Q38XR8), RNC_LEGPA (Q5X446), RNC_LEGPC (A5ID21), RNC_LEGPH (Q5ZUD5), RNC_LEGPL (Q5WVI4), RNC_LEIXX (Q6AFJ4), RNC_LEPBJ (Q04R64), RNC_LEPBL (Q053L4), RNC_LEPIC (Q75FW5), RNC_LEPIN (Q8EXX3), RNC_LEUCK (B1N016), RNC_LEUMM (Q03VW5), RNC_LIGS1 (Q1WUA0), RNC_LIMF3 (B2GD42), RNC_LIMRD (A5VKP2), RNC_LIMRJ (B2G826), RNC_LISIN (Q92AK3), RNC_LISMC (C1KWA4), RNC_LISMF (Q71YL2), RNC_LISMH (B8DDU8), RNC_LISMO (Q8Y691), RNC_LISW6 (A0AJR0), RNC_MAGMM (A0L633), RNC_MANSM (Q65VN5), RNC_MARMS (A6VUP6), RNC_MESFL (Q6F1N5), RNC_METCA (Q608M7), RNC_METSB (B8EK13), RNC_MIMIV (Q5UQT7), RNC_MOOTA (Q2RJX2), RNC_MOUSE (Q5HZJ0), RNC_MYCBO (P66667), RNC_MYCCT (Q2SRZ8), RNC_MYCLE (O69469), RNC_MYCM1 (Q6KHN3), RNC_MYCMS (Q6MTC9), RNC_MYCPA (Q73VL8), RNC_MYCS2 (A0QV20), RNC_MYCS5 (Q4A589), RNC_MYCTO (P9WH02), RNC_MYCTU (P9WH03), RNC_MYXXD (Q1D5X9), RNC_NATTJ (B2A2N1), RNC_NEIG1 (Q5F9X7), RNC_NEIG2 (B4RJT7), RNC_NEIM8 (C9X0M5), RNC_NEIMA (Q9JVD3), RNC_NEIMB (Q9K0C8), RNC_NITEC (Q0AF70), RNC_NITEU (Q820I0), RNC_NITOC (Q3J8D5), RNC_NITSB (A6Q1H0), RNC_NITV2 (Q72C44), RNC_NITV9 (B8DPB3), RNC_NITWN (Q3SRB3), RNC_NOCFA (Q5YS08), RNC_OCEIH (Q8ER05), RNC_OENOB (Q04GL2), RNC_OLEA2 (Q310Z1), RNC_ONYPE (Q6YPW7), RNC_PANAM (D4GKM1), RNC_PARUW (Q6MEK1), RNC_PASMU (P57805), RNC_PECAS (Q6D219), RNC_PECCP (C6DC00), RNC_PEDPA (Q03FX0), RNC_PELTS (A5D1H6), RNC_PELUB (Q4FLS9), RNC_PHEZH (B4RCU4), RNC_PHOLL (Q7N1X5), RNC_PHOPR (Q6LMS2), RNC_PHOV8 (A6KZ76), RNC_PHYMT (B3R075), RNC_PROMA (G3XCR8), RNC_PROMH (B4F047), RNC_PSE14 (Q48EV3), RNC_PSEA7 (A6VAK6), RNC_PSEA8 (B7UYX2), RNC_PSEAB (Q02HS2), RNC_PSEAE (Q9XCX9), RNC_PSEE4 (Q1I5V8), RNC_PSEF5 (Q4KHT1), RNC_PSEFS (C3K6Y7), RNC_PSELT (A8F397), RNC_PSEMY (A4XSC4), RNC_PSEP1 (A5W8F2), RNC_PSEPF (Q3KHL9), RNC_PSEPG (B0KV27), RNC_PSEPK (Q88MY5), RNC_PSEPW (B1J4E0), RNC_PSESM (Q87XG1), RNC_PSET1 (Q3IDL2), RNC_PSEU2 (Q4ZPE1), RNC_PSYA2 (Q4FUV6), RNC_PSYIN (A1SSM8), RNC_RALN1 (Q8Y0I1), RNC_RALPJ (B2U981), RNC_RHIE6 (B3PUN8), RNC_RHIEC (Q2KAE3), RNC_RHIJ3 (Q1MJ54), RNC_RHILO (Q985A6), RNC_RHILW (B5ZW73), RNC_RHIME (Q92R47), RNC_RHIR8 (B9JC73), RNC_RHOBA (Q7UGZ7), RNC_RHOCA (Q52698), RNC_RHOPA (Q6N6C1), RNC_RICAE (C3PMF3), RNC_RICAH (A8GM79), RNC_RICB8 (A8GYE2), RNC_RICBR (Q1RHA2), RNC_RICCK (A8EXI3), RNC_RICCN (Q92JB0), RNC_RICFE (Q4UKA8), RNC_RICM5 (A8F0M2), RNC_RICPR (Q9ZE31), RNC_RICPU (C4K1R3), RNC_RICRO (B0BW84), RNC_RICRS (A8GQT8), RNC_RICTY (Q68XY5), RNC_ROSCS (A7NGC5), RNC_ROSDO (Q16AI6), RNC_ROSHA (G2SYN4), RNC_ROSS1 (A5V230), RNC_RUEPO (Q5LNK5), RNC_SALCH (Q57LD0), RNC_SALEP (B5QTU8), RNC_SALG2 (B5RD49), RNC_SALPA (Q5PIG5), RNC_SALPK (B5BAT0), RNC_SALTI (Q8Z4K4), RNC_SALTY (Q56056), RNC_SERP5 (A8GI25), RNC_SHEAM (A1S3Y1), RNC_SHEB2 (B8EBQ2), RNC_SHEB5 (A3D1V6), RNC_SHEB8 (A6WKQ7), RNC_SHEB9 (A9L5N6), RNC_SHEDO (Q12KI1), RNC_SHEFN (Q07YZ6), RNC_SHEHH (B0TIV7), RNC_SHELP (A3QBS7), RNC_SHEON (Q8EH81), RNC_SHEPA (A8H1C7), RNC_SHEPC (A4Y4K4), RNC_SHEPW (B8CQJ5), RNC_SHESA (A0KZN2), RNC_SHESH (A8FSD6), RNC_SHESM (Q0HG98), RNC_SHESR (Q0HSJ1), RNC_SHESW (A1RMC7), RNC_SHEWM (B1KI57), RNC_SHIB3 (B2TXY0), RNC_SHIBS (Q31XS0), RNC_SHIDS (Q32CV4), RNC_SHIF8 (Q0T1T8), RNC_SHIFL (P0A7Y3), RNC_SHISS (Q3YYU9), RNC_SHOC1 (Q5WFM6), RNC_SINFN (C3M8S4), RNC_SINMW (A6U7A8), RNC_SODGM (Q2NS13), RNC_SOLUE (Q027L3), RNC_SPHAL (Q1GTU3), RNC_SPICI (Q53844), RNC_STAA1 (A7X1J9), RNC_STAA2 (A6U152), RNC_STAA3 (Q2FHK5), RNC_STAA8 (Q2FZ50), RNC_STAA9 (A5ISB8), RNC_STAAB (Q2YXI3), RNC_STAAC (Q5HGJ9), RNC_STAAE (A6QGD3), RNC_STAAM (Q931T1), RNC_STAAN (P66668), RNC_STAAR (Q6GHK2), RNC_STAAS (Q6G9Y0), RNC_STAAT (A8Z3R9), RNC_STAAW (P66669), RNC_STACT (B9DPJ2), RNC_STAEQ (Q5HPV8), RNC_STAES (Q8CPI1), RNC_STAHJ (Q4L5T5), RNC_STAS1 (Q49X17), RNC_STRA1 (Q3K1Y2), RNC_STRA3 (Q8E680), RNC_STRA5 (Q8E0K7), RNC_STRAW (Q82JT9), RNC_STRCO (Q9ZBQ7), RNC_STRE4 (C0M8Y3), RNC_STRGC (A8AWC2), RNC_STRMU (Q8DT66), RNC_STRP1 (P66670), RNC_STRP2 (Q04K72), RNC_STRP3 (P0DF14), RNC_STRP4 (B5E4Y2), RNC_STRP6 (Q5XDA6), RNC_STRP7 (C1C7M6), RNC_STRP8 (P66672), RNC_STRPB (Q1JCZ9), RNC_STRPC (Q1JMX4), RNC_STRPD (Q1JI19), RNC_STRPF (Q1J7V3), RNC_STRPG (A2RFW8), RNC_STRPI (B1IC43), RNC_STRPJ (B8ZJR8), RNC_STRPM (Q48UR6), RNC_STRPN (Q97QG6), RNC_STRPQ (P0DF15), RNC_STRPS (B2IPN5), RNC_STRPZ (B5XKB7), RNC_STRR6 (Q8DPJ8), RNC_STRS7 (C0MCR4), RNC_STRSV (A3CP46), RNC_STRT1 (Q5LZ68), RNC_STRT2 (Q5M3S3), RNC_STRTD (Q03K17), RNC_STRU0 (B9DRH1), RNC_STRZJ (C1CEK4), RNC_STRZP (C1CKY7), RNC_STRZT (C1CR56), RNC_SULNB (A6QCJ0), RNC_SYMTH (Q67PF5), RNC_SYNC1 (Q3A4Q8), RNC_SYNFM (A0LGM1), RNC_SYNWW (Q0AYW0), RNC_THEFY (Q47S78), RNC_THEMA (Q9X0I6), RNC_THENN (B9K9K8), RNC_THEP1 (A5IN74), RNC_THESQ (B1LCY9), RNC_THIDA (Q3SH50), RNC_TREDE (Q73NX5), RNC_TREPA (O83787), RNC_TREPS (B2S448), RNC_TRES6 (F2NV13), RNC_TROW8 (Q83I82), RNC_TROWT (Q83FY2), RNC_UREPA (Q9PQT8), RNC_VARPS (C5CSF5), RNC_VEREI (A1WMW1), RNC_VIBA3 (B7VK79), RNC_VIBC1 (A7MZA8), RNC_VIBC3 (A5F5H8), RNC_VIBCH (Q9KPB2), RNC_VIBCM (C3LR04), RNC_VIBPA (Q87LN9), RNC_VIBVU (Q8DC76), RNC_VIBVY (Q7MHN8), RNC_WIGBR (Q8D305), RNC_WOLPM (Q73FT3), RNC_WOLPP (B3CMS0), RNC_WOLSU (Q7M840), RNC_WOLTR (Q5GTI3), RNC_WOLWR (C0R4Q8), RNC_XANAC (Q8PMV0), RNC_XANC8 (Q4USF7), RNC_XANCP (Q8PB52), RNC_XANE5 (Q3BVV6), RNC_XANOR (Q5H1R2), RNC_XYLF2 (B2I604), RNC_XYLFA (Q9PB98), RNC_XYLFM (B0U3D8), RNC_XYLFT (Q87C06), RNC_YERE8 (A1JKK3), RNC_YERP3 (A7FFT9), RNC_YERPA (Q1C555), RNC_YERPE (Q8ZD72), RNC_YERPG (A9R402), RNC_YERPN (Q1CKE4), RNC_YERPP (A4TKX8), RNC_YERPS (Q667V1), RNC_ZUNPS (D5BDP9), RNC_ZYMMO (Q9Z5U2), RNT1_YEAST (Q02555), RTL1_ARATH (Q9M8N2), RTL2_ARATH (Q9LTQ0), RTL2_ORYSJ (Q6ATG6), RTL3_ARATH (Q9FKF0), RTL3_ORYSJ (Q69KJ0), SON_DROME (Q9VHB0), SON_HUMAN (P18583), SON_MOUSE (Q9QX47), STAU1_AILME (D2GVP7), STAU1_HUMAN (O95793), STAU1_MOUSE (Q9Z108), STAU2_DANRE (Q7ZW47), STAU2_HUMAN (Q9NUL3), STAU2_MOUSE (Q8CJ67), STAU2_RAT (Q68SB1), STAU2_XENTR (Q5M7M7), STAUH_APLCA (Q3L1C9), STAU_DROME (P25159), STRBP_BOVIN (Q08E27), STRBP_CHICK (Q5ZIL4), STRBP_HUMAN (Q96SI9), STRBP_MOUSE (Q91WM1), STRBP_PONAB (Q5R6Y5), STRBP_RAT (Q9JKU6), STRBP_XENLA (Q6DCD0), TRBP2_BOVIN (Q0IIG6), TRBP2_DANRE (Q7SXR1), TRBP2_HUMAN (Q15633), TRBP2_MOUSE (P97473), TRBP2_RAT (Q3SWU0), TRBP2_TETNG (Q4SS66), TRBP2_XENLA (Q6GPZ1), TRBP2_XENTR (Q5BJ52), YOT2_CAEEL (P34648)» more
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UniProtKB/Swiss-Prot False negative sequences |
59 sequences
DCL1_ASPCL (A1CBC9), DCL1_ASPFU (Q4WVE3), DCL1_ASPNC (A2RAF3), DCL1_ASPOR (Q2U6C4), DCL1_ASPTN (Q0CW42), DCL1_COCIM (Q1DKI1), DCL1_CRYPA (Q2VF19), DCL1_NEOFI (A1DE13), DCL1_NEUCR (Q7S8J7), DCL1_PHANO (Q0UI93), DCL1_PYRO7 (A4RKC3), DCL2_PHANO (Q0UL22), DCL3A_ORYSJ (Q5N870), DCL3B_ORYSJ (Q7XD96), DHX30_BOVIN (Q2NKY8), DHX30_CHICK (Q5ZI74), DHX30_HUMAN (Q7L2E3), DHX30_MOUSE (Q99PU8), DHX30_PONAB (Q5R607), DHX30_RAT (Q5BJS0), DUS2_HUMAN (Q9NX74), DUS2_MOUSE (Q9D7B1), HEN1_ARATH (Q9C5Q8), NS3B_BC133 (P0C530), NS3B_BCHK4 (A3EX96), NS3B_BCHK5 (A3EXD2), NSP3_ROT41 (Q3ZK63), NSP3_ROTAD (B3SRS1), NSP3_ROTAM (Q9ICB2), NSP3_ROTB2 (Q0H8C1), NSP3_ROTBN (Q65701), NSP3_ROTBU (P04514), NSP3_ROTGA (Q5K037), NSP3_ROTH3 (A4ZCW4), NSP3_ROTH6 (Q82051), NSP3_ROTH7 (B3SRR3), NSP3_ROTHD (A1YTU9), NSP3_ROTHK (Q82050), NSP3_ROTHL (A3DSK9), NSP3_ROTHP (B3SRV3), NSP3_ROTHS (Q82052), NSP3_ROTHT (Q82053), NSP3_ROTHW (Q82054), NSP3_ROTJ1 (Q5Y9A9), NSP3_ROTP5 (Q85014), NSP3_ROTRF (Q86504), NSP3_ROTRH (Q8UZL8), NSP3_ROTS1 (P03536), NSP3_ROTS4 (Q00721), NSP3_ROTSH (A2T3N5), NSP3_ROTW3 (B2BRG4), NSP3_ROTWI (Q82049), RM03_NEUCR (Q7SA88), RM03_SCHPO (O43042), RM44_BOVIN (Q2KIS2), RNC_IIV3(Q196V9), RNC_MYCGA (Q7NAZ2), RNC_MYCGF (D3FI09), RNC_MYCGH (D3FH24)» more |
UniProtKB/Swiss-Prot False positive sequences |
1 sequence
DNPEP_BOVIN (Q2HJH1) |
PDB [Detailed view] |
218 PDB
1DI2; 1EKZ; 1O0W; 1QU6; 1RC7; 1STU; 1T4L; 1T4N; 1T4O; 1UHZ; 1UIL; 1WHN; 1WHQ; 1X47; 1X48; 1X49; 1YYK; 1YYO; 1YYW; 1YZ9; 2A11; 2B7T; 2B7V; 2CPN; 2DIX; 2DMY; 2EZ6; 2KHX; 2L2K; 2L2M; 2L2N; 2L33; 2L3C; 2L3J; 2LBS; 2LJH; 2LRS; 2LUP; 2LUQ; 2MDR; 2N3F; 2N3G; 2N3H; 2NA2; 2NUE; 2NUF; 2NUG; 2RS6; 2RS7; 2YT4; 3ADG; 3ADI; 3ADJ; 3ADL; 3C4B; 3C4T; 3HTX; 3J6B; 3J7Y; 3J9M; 3LLH; 3N3W; 3P1X; 3VYX; 3VYY; 4DKK; 4M2Z; 4M30; 4OOG; 4WFT; 4WYQ; 4X8W; 5AOR; 5B16; 5CFF; 5DV7; 5MRC; 5MRE; 5MRF; 5N8L; 5N8M; 5NPA; 5OC4; 5OC6; 5OOL; 5OOM; 5T16; 5ZAK; 5ZAL; 5ZAM; 5ZTM; 6BU9; 6BUA; 6EI8; 6F00; 6HTU; 6I3R; 6I9R; 6LXD; 6LXE; 6NU2; 6NU3; 6SDW; 6SDY; 6V5B; 6V5C; 6VFF; 6VLZ; 6VMI; 6YWS; 6YWV; 6YWX; 6ZBK; 6ZM5; 6ZM6; 6ZS9; 6ZSA; 6ZSB; 6ZSC; 6ZSD; 6ZSE; 6ZSG; 7A5F; 7A5G; 7A5H; 7A5I; 7A5J; 7A5K; 7ELD; 7ELE; 7L08; 7L20; 7O9K; 7O9M; 7ODR; 7ODS; 7ODT; 7OF0; 7OF2; 7OF3; 7OF4; 7OF5; 7OF6; 7OF7; 7OG4; 7OI6; 7OI7; 7OI8; 7OI9; 7OIA; 7OIB; 7OIC; 7OID; 7OIE; 7PD3; 7PO4; 7QH6; 7QH7; 7QI4; 7QI5; 7QI6; 7R97; 7V6B; 7V6C; 7W0A; 7W0B; 7W0C; 7W0D; 7W0E; 7W0F; 7XW2; 7XW3; 7YYM; 7YYN; 7YZ4; 7ZJ1; 7ZLQ; 7ZPI; 7ZPJ; 7ZPK; 8ANY; 8B9G; 8B9I; 8B9J; 8B9K; 8B9L; 8DFV; 8DG5; 8DG7; 8DGA; 8DGI; 8DGJ; 8E0F; 8E4X; 8HF0; 8HF1; 8I9J; 8IGD; 8IZN; 8K2A; 8K2B; 8OIR; 8OIT; 8PJB; 8PJJ; 8PK0; 8QSJ; 8QU5; 8SZP; 8XT0; 8XT1; 8XT2; 8XT3; 9ASM; 9ASN; 9ASO; 9ASP; 9ASQ » more |