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PROSITE entry PS50158


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General information about the entry

Entry name [info] ZF_CCHC
Accession [info] PS50158
Entry type [info] MATRIX
Date [info] 01-JAN-2002 CREATED;
13-FEB-2019 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC50158
Associated ProRule [info] PRU00047

Name and characterization of the entry

Description [info] Zinc finger CCHC-type profile.
Matrix / Profile [info] 
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=18;
/DISJOINT: DEFINITION=PROTECT; N1=2; N2=17;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=-0.5831000; R2=0.0164828; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=334.2301331; R2=0.0794979; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=552; H_SCORE=378; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=430; H_SCORE=368; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: D=-20; I=-20; B1=0; E1=0; MI=-105; MD=-105; IM=-105; DM=-105;

...
 
                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/I:         B1=0; BI=-105; BD=-105;
/M: SY='R';  M= -9, -6,-18, -7, -5,-19,-11,-10,-15, -1,-15, -7, -4,-13, -1,  2, -5, -7,-11,-25,-13, -4;
/M: SY='K';  M= -6,-10,-24,-11, -5,-19, -8,-13,-16,  4,-14, -7, -6, -7, -3,  4, -6, -6,-12,-23,-14, -5;
/M: SY='C';  M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30;
/M: SY='Y';  M=-17,-20,-28,-24,-20, 28,-25,  1, -6,-15, -4, -5,-15,-26,-16,-10,-16, -9,-11, 25, 39,-19;
/M: SY='N';  M= -9,  8,-24,  1,  0,-20,-13, -1,-19, 15,-22,-11, 17,-16,  2, 14,  0, -3,-18,-27,-10,  0;
/M: SY='C';  M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30;
/M: SY='G';  M= -3, -2,-28, -4,-13,-28, 47,-13,-35,-12,-28,-18,  7,-19,-13,-13,  1,-15,-28,-23,-25,-13;
/M: SY='K';  M= -7,  2,-28,  3, 16,-30,-13, -4,-26, 20,-24,-11,  2,-10, 18, 14, -1, -8,-23,-24,-14, 17;
/M: SY='P';  M= -4, -6,-26, -5,  5,-18,-15,-10,-14, -4,-15, -9, -6,  7, -2, -6, -2, -2,-14,-26,-14,  0;
/M: SY='G';  M= -2, -7,-30, -6,-17,-28, 60,-17,-38,-18,-29,-20,  1,-20,-18,-18, -1,-19,-29,-20,-26,-17;
/M: SY='H';  M=-20,  0,-30,  0,  0,-20,-20,100,-30,-10,-20,  0, 10,-20, 10,  0,-10,-20,-30,-30, 20,  0;
/M: SY='M';  M=-11,-20,-24,-23,-15,  4,-27,-11,  7, -9,  6,  9,-16,-23, -8, -5,-15, -7,  3, -9,  8,-13;
/M: SY='A';  M= 16, -7,-17,-12, -3,-20, -8,-11,-14,  2,-15, -5, -4,-12,  2,  0,  7, -1, -8,-24,-15, -1;
/M: SY='R';  M= -6, -2,-25, -4,  0,-21,-14, -7,-23, 18,-22,-12,  3,-14,  3, 24,  0, -4,-16,-22,-12,  0;
/M: SY='D';  M=-13, 27,-27, 33, 21,-32,-12,  1,-30,  6,-26,-20, 16,-10, 12, -1,  3, -6,-27,-33,-17, 17;
/M: SY='C';  M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30;
/M: SY='P';  M= -9,-10,-31, -6,  0,-24,-19,-11,-21,  2,-23,-14, -9, 31, -1,  3, -4, -2,-22,-24,-18, -4;
/M: SY='E';  M= -3,  4,-23,  3, 11,-25,-12, -1,-21,  7,-20,-11,  6,-11, 10,  4,  4, -1,-18,-28,-14, 10;
/I:         E1=0; IE=-105; DE=-105;
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 738 in 458 different sequences
Number of true positive hits 737 in 457 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 110
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.86 %
Recall (true positives / (true positives + false negatives)) 87.01 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] window20_shuffled
Author [info] K_Hofmann, N_Hulo
Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 9
Feature key [info] ZN_FING
Feature description [info] CCHC-type
Version [info] 6

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 457 sequences 

AIR1_SCHPO  (Q9P795), AIR1_YEAST  (P40507), AIR2_YEAST  (Q12476), 

BBP_ASPFU   (Q4WXV6), BBP_CANAL   (Q5AED9), BBP_CANGA   (Q6FW77), 
BBP_CRYNB   (P0CO45), BBP_CRYNJ   (P0CO44), BBP_DEBHA   (Q6BSP4), 
BBP_DICDI   (Q54BM5), BBP_EREGS   (Q750X2), BBP_NEUCR   (Q8NIW7), 
BBP_SCHPO   (O74555), BBP_USTMA   (Q4P0H7), BBP_YARLI   (Q6C187), 
BBP_YEAST   (Q12186), BYR3_SCHPO  (P36627), CAPSD_CAMVC (P03543), 
CAPSD_CAMVD (P03544), CAPSD_CAMVN (Q00956), CAPSD_CAMVS (P03542), 
CAPSD_CERV  (P05399), CAPSD_CYLCV (Q7TD09), CAPSD_FMVD  (P09519), 
CAPSD_SOCMV (P15627), CNBP_BOVIN  (Q3T0Q6), CNBP_CHICK  (O42395), 
CNBP_DROME  (Q8T8R1), CNBP_HUMAN  (P62633), CNBP_MOUSE  (P53996), 
CNBP_PONAB  (Q5R5R5), CNBP_RAT(P62634), COLDT_HUMAN (Q6ZST2), 
COPIA_DROME (P04146), CPSF4_BOVIN (O19137), CPSF4_DROME (Q9VPT8), 
CPSF4_HUMAN (O95639), CPSF4_MOUSE (Q8BQZ5), CPSF4_RAT   (Q5FVR7), 
CPSF4_XENLA (Q6DJP7), CPSF4_XENTR (Q66KE3), CP_CSVMV(Q66283), 
CSP1_ARATH  (O65639), CSP2_ARATH  (Q41188), CSP3_ARATH  (Q94C69), 
CSP4_ARATH  (Q38896), CXIP4_ARATH (Q84Y18), CYP59_ARATH (Q6Q151), 
DDX41_DROME (Q9V3C0), DIPP_MIMIV  (Q5UQW2), GA113_HUMAN (P62684), 
GAG_ALVA(P0C776), GAG_BAEVM   (P03341), GAG_BIV29   (P19558), 
GAG_BLVAU   (P25058), GAG_BLVJ(P03344), GAG_CAEVC   (P33458), 
GAG_EIAV9   (P69730), GAG_EIAVC   (P69731), GAG_EIAVY   (P69732), 
GAG_FIVPE   (P16087), GAG_FIVSD   (P19027), GAG_FIVT2   (P31821), 
GAG_FIVWO   (Q05313), GAG_FLV (P10262), GAG_GALV(P21416), 
GAG_HTL1A   (P03345), GAG_HTL1C   (P14076), GAG_HTL1L   (P0C209), 
GAG_HTL1M   (P14077), GAG_HTL32   (Q0R5R4), GAG_HTL3P   (Q09T00), 
GAG_HTLV2   (P03346), GAG_HV190   (O93182), GAG_HV192   (O12157), 
GAG_HV193   (O89291), GAG_HV196   (Q9QBY4), GAG_HV197   (Q9QC00), 
GAG_HV19N   (P0C1K7), GAG_HV1A2   (P03349), GAG_HV1AN   (Q77372), 
GAG_HV1B1   (P03347), GAG_HV1B5   (P04593), GAG_HV1B9   (Q73367), 
GAG_HV1BR   (P03348), GAG_HV1C4   (P05887), GAG_HV1EL   (P04592), 
GAG_HV1ET   (Q75001), GAG_HV1H2   (P04591), GAG_HV1J3   (P12494), 
GAG_HV1JR   (P20873), GAG_HV1LW   (Q70622), GAG_HV1M2   (Q9QBZ2), 
GAG_HV1MA   (P04594), GAG_HV1MN   (P05888), GAG_HV1MP   (Q9QBZ6), 
GAG_HV1MV   (Q79665), GAG_HV1N5   (P12493), GAG_HV1ND   (P18800), 
GAG_HV1OY   (P20889), GAG_HV1RH   (P05890), GAG_HV1S2   (Q9WC53), 
GAG_HV1S9   (Q9WC62), GAG_HV1SE   (O89939), GAG_HV1U4   (P24736), 
GAG_HV1V9   (Q9Q721), GAG_HV1VI   (Q9QSR4), GAG_HV1Y2   (P35962), 
GAG_HV1YB   (Q9IDV8), GAG_HV1YF   (O91079), GAG_HV1Z2   (P12495), 
GAG_HV2BE   (P18095), GAG_HV2CA   (P24106), GAG_HV2D1   (P17756), 
GAG_HV2D2   (P15832), GAG_HV2EH   (Q74230), GAG_HV2G1   (P18041), 
GAG_HV2KR   (Q74119), GAG_HV2NZ   (P05891), GAG_HV2RO   (P04590), 
GAG_HV2SB   (P12450), GAG_HV2ST   (P20874), GAG_HV2UC   (Q76633), 
GAG_IPHA(P04023), GAG_IPMA(P11365), GAG_JEMBR   (Q82850), 
GAG_JSRV(P31622), GAG_KORV(Q9TTC2), GAG_MLVAV   (P03336), 
GAG_MLVBM   (P29167), GAG_MLVCB   (P27460), GAG_MLVDE   (P29168), 
GAG_MLVDU   (P23090), GAG_MLVF5   (P26807), GAG_MLVFF   (P26806), 
GAG_MLVFP   (P26805), GAG_MLVHO   (P21435), GAG_MLVMS   (P03332), 
GAG_MLVRD   (P11269), GAG_MMTVB   (P10258), GAG_MMTVC   (P11284), 
GAG_MPMV(P07567), GAG_MSVMO   (P03334), GAG_OMVVS   (P16900), 
GAG_RSVP(P03322), GAG_RSVSB   (O92954), GAG_SIVCZ   (P17282), 
GAG_SIVEK   (Q1A250), GAG_SIVG1   (Q02843), GAG_SIVGB   (P22381), 
GAG_SIVM1   (P05894), GAG_SIVMB   (Q1A268), GAG_SIVMK   (P05893), 
GAG_SIVMS   (P31634), GAG_SIVS4   (P12496), GAG_SIVSP   (P19504), 
GAG_SIVTN   (Q8AII2), GAG_SIVV1   (P27972), GAG_SIVVG   (P27978), 
GAG_SIVVT   (P05892), GAG_SRV1(P04022), GAG_SRV2(P51516), 
GAG_VILV(P03352), GAG_VILV1   (P23424), GAG_VILV2   (P23425), 
GAG_VILVK   (P35955), GAG_WDSV(Q88937), GAG_WMSV(P03330), 
GAG_XMRV3   (Q2F7J2), GAG_XMRV4   (Q2F7I9), GAG_XMRV6   (Q27ID9), 
GAK10_HUMAN (P87889), GAK19_HUMAN (Q9YNA8), GAK21_HUMAN (P62683), 
GAK24_HUMAN (P63145), GAK5_HUMAN  (Q9HDB9), GAK6_HUMAN  (Q7LDI9), 
GAK7_HUMAN  (P63130), GAK8_HUMAN  (P62685), GAK9_HUMAN  (P63126), 
GGAG_FLV(P0DOH3), GGAG_MLVAV  (P0DOG8), GGAG_MLVCB  (P0DOH4), 
GGAG_MLVF5  (P0DOH0), GGAG_MLVFF  (P0DOH5), GGAG_MLVFP  (P0DOH6), 
GGAG_MLVMN  (Q8UN02), GIS2_YEAST  (P53849), GLH1_CAEEL  (P34689), 
GLH2_CAEEL  (Q966L9), GLH3_CAEEL  (O01836), GLH4_CAEEL  (O76743), 
GRP2_NICSY  (P27484), HEXP_LEIMA  (Q04832), KUA1_ARATH  (Q9LVS0), 
LARK_DROME  (Q94901), LIN28_CAEBR (Q61CX7), LIN28_CAEEL (P92186), 
LIN28_CAERE (P91599), LN28A_CHICK (Q45KJ5), LN28A_DANRE (Q803L0), 
LN28A_HUMAN (Q9H9Z2), LN28A_MOUSE (Q8K3Y3), LN28A_XENLA (Q8JHC4), 
LN28A_XENTR (Q5EB47), LN28B_CHICK (Q45KJ4), LN28B_HUMAN (Q6ZN17), 
LN28B_MOUSE (Q45KJ6), LN28B_XENLA (Q8AVK2), M5162_ARATH (Q9FKF9), 
MPE1_YEAST  (P35728), PEG10_HUMAN (Q86TG7), PEG10_MOUSE (Q7TN75), 
PHIP1_ARATH (Q9M3B8), PNMA3_HUMAN (Q9UL41), PNMA3_MOUSE (Q8JZW8), 
POK9_HUMAN  (P63128), POLG_PVCV1  (Q91DM0), POLG_PVCV2  (Q6XKE6), 
POLX_TOBAC  (P10978), POL_ALV (Q7SQ98), POL_ALVA(Q04095), 
POL_BAEVM   (P10272), POL_BIV29   (P19560), POL_BLVAU   (P25059), 
POL_BLVJ(P03361), POL_COYMV   (P19199), POL_FLV (P10273), 
POL_GALV(P21414), POL_HTL1A   (P03362), POL_HTL1C   (P14078), 
POL_HTL1L   (P0C211), POL_HTL32   (Q0R5R2), POL_HTL3P   (Q4U0X6), 
POL_HTLV2   (P03363), POL_HV190   (O93215), POL_HV192   (O12158), 
POL_HV193   (O89290), POL_HV196   (Q9QBY3), POL_HV197   (Q9QBZ9), 
POL_HV19N   (O41798), POL_HV1A2   (P03369), POL_HV1AN   (Q77373), 
POL_HV1B1   (P03366), POL_HV1B5   (P04587), POL_HV1B9   (Q73368), 
POL_HV1BR   (P03367), POL_HV1C4   (P05960), POL_HV1EL   (P04589), 
POL_HV1ET   (Q75002), POL_HV1H2   (P04585), POL_HV1J3   (P12498), 
POL_HV1JR   (P20875), POL_HV1LW   (P0C6F2), POL_HV1M2   (Q9QBZ1), 
POL_HV1MA   (P04588), POL_HV1MN   (P05961), POL_HV1MP   (Q9QBZ5), 
POL_HV1MV   (Q79666), POL_HV1N5   (P12497), POL_HV1ND   (P18802), 
POL_HV1OY   (P20892), POL_HV1RH   (P05959), POL_HV1S2   (Q9WC54), 
POL_HV1S9   (Q9WC63), POL_HV1SE   (O89940), POL_HV1U4   (P24740), 
POL_HV1V9   (Q9Q720), POL_HV1VI   (Q9QSR3), POL_HV1Y2   (P35963), 
POL_HV1YB   (Q9IDV9), POL_HV1YF   (O91080), POL_HV1Z2   (P12499), 
POL_HV2BE   (P18096), POL_HV2CA   (P24107), POL_HV2D1   (P17757), 
POL_HV2D2   (P15833), POL_HV2EH   (Q89928), POL_HV2G1   (P18042), 
POL_HV2KR   (Q74120), POL_HV2NZ   (P05962), POL_HV2RO   (P04584), 
POL_HV2SB   (P12451), POL_HV2ST   (P20876), POL_HV2UC   (Q76634), 
POL_JEMBR   (Q82851), POL_JSRV(P31623), POL_KORV(Q9TTC1), 
POL_MLVAV   (P03356), POL_MLVBM   (Q7SVK7), POL_MLVCB   (P08361), 
POL_MLVF5   (P26810), POL_MLVFF   (P26809), POL_MLVFP   (P26808), 
POL_MLVMS   (P03355), POL_MLVRD   (P11227), POL_MMTVB   (P03365), 
POL_MMTVC   (P11283), POL_MPMV(P07572), POL_RSVP(P03354), 
POL_RSVSB   (O92956), POL_SIVCZ   (P17283), POL_SIVEK   (Q1A249), 
POL_SIVG1   (Q02836), POL_SIVGB   (P22382), POL_SIVM1   (P05896), 
POL_SIVMB   (Q1A267), POL_SIVMK   (P05897), POL_SIVS4   (P12502), 
POL_SIVSP   (P19505), POL_SIVTN   (Q8AII1), POL_SIVV1   (P27973), 
POL_SIVVG   (P27980), POL_SIVVT   (P05895), POL_SRV1(P04025), 
POL_SRV2(P51517), POL_VILV(P03370), POL_VILV1   (P23426), 
POL_VILV2   (P23427), POL_VILVK   (P35956), POL_WDSV(O92815), 
POL_WMSV(P03359), POL_XMRV3   (Q2F7J3), POL_XMRV4   (Q2F7J0), 
POL_XMRV6   (A1Z651), POST_XENLA  (P27536), PRO_BLVAU   (P0DOI1), 
PRO_BLVJ(P0DOI0), PRO_HTL1A   (P10274), PRO_HTL1C   (P14074), 
PRO_HTL1L   (P0C210), PRO_HTL32   (Q0R5R3), PRO_HTL3P   (Q09SZ9), 
PRO_HTLV2   (P03353), PRO_JSRV(P31625), PRO_MMTVB   (P10271), 
PRO_MMTVC   (Q9IZT2), PRO_MPMV(P07570), PRO_SRV1(P04024), 
PRO_SRV2(P51518), RBBP6_HUMAN (Q7Z6E9), RBBP6_MOUSE (P97868), 
RBM41_DANRE (Q6IQ97), RBM4B_HUMAN (Q9BQ04), RBM4B_MOUSE (Q8VE92), 
RBM4B_PIG   (Q06AT9), RBM4B_RAT   (Q64LC9), RBM4_BOVIN  (Q3MHX3), 
RBM4_HUMAN  (Q9BWF3), RBM4_MACFA  (Q4R979), RBM4_MOUSE  (Q8C7Q4), 
RBM4_RABIT  (Q9BDY9), RECQ4_MOUSE (Q75NR7), RFA1C_ORYSJ (Q65XV7), 
RFA1E_ARATH (F4JSG3), RH35A_ORYSJ (Q0E3X4), RH35_ARATH  (Q9LU46), 
RH3A_MAIZE  (A0A1D6GDY8), RH3B_MAIZE  (A0A1D6LAB7), RH3_ARATH   (Q8L7S8), 
RH3_ORYSJ   (Q0DM51), RSZ21_ARATH (O81127), RSZ21_ORYSJ (Q6K4N0), 
RSZ22_ARATH (O81126), RSZ32_ARATH (Q9FYB7), RSZ33_ARATH (Q8VYA5), 
RTL3_HUMAN  (Q8N8U3), RTL3_MOUSE  (Q6P1Y1), RTL4_HUMAN  (Q6ZR62), 
RTL4_MOUSE  (Q3URY0), RZ1A_ARATH  (Q9LIN3), RZ1B_ARATH  (O22703), 
RZ1C_ARATH  (Q8RWN5), RZ21A_ORYSJ (Q69KL9), RZ22A_ARATH (Q9SJA6), 
RZP23_ORYSJ (Q6K9C3), SF01_HUMAN  (Q15637), SF01_MOUSE  (Q64213), 
SF1_ARATH   (Q9LU44), SLU7_CAEEL  (Q21278), SLU7_NEUCR  (Q7SDY6), 
SLU7_YEAST  (Q02775), SR1IP_DANRE (Q3B7G7), SR1IP_HUMAN (Q8N9Q2), 
SR1IP_MOUSE (Q4V9W2), SR1IP_RAT   (Q5RJP9), SR1IP_XENTR (Q28EE8), 
SRSF7_BOVIN (Q3T106), SRSF7_HUMAN (Q16629), SRSF7_MOUSE (Q8BL97), 
TLH1_SCHPO  (P0CT33), TLH2_SCHPO  (Q1RKN3), TOP3A_ARATH (Q9LVP1), 
TUT4_HUMAN  (Q5TAX3), TUT4_MOUSE  (B2RX14), TUT7_HUMAN  (Q5VYS8), 
TUT7_MOUSE  (Q5BLK4), U1131_ARATH (Q9CAE4), VASAL_PENVA (Q4JG17), 
XRN2_ARATH  (Q9FQ02), XRN2_ASPFU  (Q8TFZ1), XRN2_ASPOR  (Q2UCP5), 
XRN2_CHAGB  (Q2GNZ6), XRN2_CRYNB  (P0CL89), XRN2_CRYNJ  (P0CL88), 
XRN2_EMENI  (Q5BFH3), XRN2_GIBZE  (Q4HWE2), XRN2_USTMA  (Q4P149), 
XRN3_ARATH  (Q9FQ03), XRN4_ARATH  (Q9FQ04), Y1R1_DROME  (P16424), 
YG31A_YEAST (Q12173), YG31B_YEAST (Q99315), YI31A_YEAST (Q99219), 
YI31B_YEAST (Q7LHG5), YL92_SCHPO  (Q9HFF2), YORF_SCHPO  (O94264), 
YRD6_CAEEL  (Q09575), YTH1_CRYNB  (P0CS65), YTH1_CRYNJ  (P0CS64), 
YTH1_USTMA  (Q4P384), ZCC17_HUMAN (Q9NP64), ZCC17_MACFA (Q95KF9), 
ZCC17_MOUSE (Q9ESX4), ZCH12_MOUSE (Q9CZA5), ZCH12_RAT   (Q5HZA3), 
ZCH13_HUMAN (Q8WW36), ZCH14_HUMAN (Q8WYQ9), ZCH14_MOUSE (Q8VIG0), 
ZCH24_HUMAN (Q8N2G6), ZCH24_MACFA (Q8HXK7), ZCH24_MOUSE (B2RVL6), 
ZCHC2_HUMAN (Q9C0B9), ZCHC2_MOUSE (Q69ZB8), ZCHC2_RAT   (Q498S6), 
ZCHC3_HUMAN (Q9NUD5), ZCHC3_MOUSE (Q8BPK2), ZCHC4_XENLA (Q6DCD7), 
ZCHC7_BOVIN (Q2KIN0), ZCHC7_HUMAN (Q8N3Z6), ZCHC7_MOUSE (B1AX39), 
ZCHC7_RAT   (B1WC15), ZCHC7_XENLA (A1L2T6), ZCHC8_CHICK (Q5F3D1), 
ZCHC8_DROME (Q2PE14), ZCHC8_HUMAN (Q6NZY4), ZCHC8_MOUSE (Q9CYA6), 
ZCHC8_PONAB (Q5R789), ZCHC8_XENLA (Q6DD45), ZCHC9_HUMAN (Q8N567), 
ZCHC9_MOUSE (Q8R1J3), ZCRB1_BOVIN (Q56JZ7), ZCRB1_DANRE (Q5SP50), 
ZCRB1_HUMAN (Q8TBF4), ZCRB1_MOUSE (Q9CZ96), ZCRB1_RAT   (Q499V6), 
ZCRB1_XENLA (Q6DJI9)
» more

UniProtKB/Swiss-Prot
False negative sequences		 110 sequences 

CAPSD_CAMVE (Q02951), CLIP1_CHICK (O42184), CLIP1_HUMAN (P30622), 

CLIP1_MOUSE (Q922J3), CLIP1_RAT   (Q9JK25), DDB2_ARATH  (Q6NQ88), 
DDB2_ORYSJ  (Q84KJ3), DDX41_DICDI (Q54KG1), DDX41_HUMAN (Q9UJV9), 
DDX41_MOUSE (Q91VN6), EHD2_ORYSI  (B8BGV5), EHD2_ORYSJ  (B1B534), 
GAGXE_DROME (Q9NBX5), GP_ANDV (Q9E006), GP_BCCV (P0DTJ0), 
GP_DOBV (Q806Y7), GP_HANTB(P28728), GP_HANTH(P16493), 
GP_HANTL(P16853), GP_HANTV(P08668), GP_NYV  (Q83887), 
GP_PHV  (P27315), GP_PUUMG(P21400), GP_PUUMK(P41265), 
GP_PUUMP(P41266), GP_PUUMS(P27312), GP_SEOU8(P33455), 
GP_SEOUR(P28729), GP_SEOUS(P17880), GP_SINV (Q89905), 
GP_TULV (P0DTJ1), HPF1_DROME  (Q9VNI3), IDD10_ARATH (Q700D2), 
IDD11_ARATH (Q9LRW7), IDD12_ARATH (O22759), IDD13_ARATH (F4JYZ8), 
IDD14_ARATH (Q9C9X7), IDD15_ARATH (F4IPE3), IDD16_ARATH (Q9FRH4), 
IDD1_ARATH  (Q9LVQ7), IDD2_ARATH  (Q9SCQ6), IDD3_ARATH  (Q9ZWA6), 
IDD4_ARATH  (Q8GYC1), IDD5_ARATH  (Q9ZUL3), IDD6_ARATH  (Q8RWX7), 
IDD7_ARATH  (Q8H1F5), IDD8_ARATH  (Q9FFH3), IDD9_ARATH  (Q944L3), 
LIN28_DROME (Q9VRN5), MBM_DROME   (Q9VPM5), MEP1_CAEBR  (Q61SK8), 
MEP1_CAEEL  (Q21502), MYBS3_ORYSJ (Q7XC57), POLR1_ARATH (Q94HW2), 
POLR2_ARATH (Q9ZT94), PQT3L_ARATH (B9DFV2), PQT3_ARATH  (F4JP52), 
RH35B_ORYSJ (Q5Z6G5), RH43_ARATH  (Q9SZB4), RNP1_CAEEL  (Q10667), 
RP9_HUMAN   (Q8TA86), RP9_MOUSE   (P97762), SIGM3_REOVD (P03527), 
SIGM3_REOVJ (P30211), SIGM3_REOVL (P07939), SLU7A_ARATH (Q9SHY8), 
SLU7B_ARATH (O23174), SLU7_ASPFU  (Q4WWR2), SLU7_BOVIN  (Q3ZBE5), 
SLU7_CHICK  (Q5ZIG2), SLU7_CRYNB  (P0CR53), SLU7_CRYNJ  (P0CR52), 
SLU7_DANRE  (Q5U3F2), SLU7_DICDI  (Q54TA0), SLU7_DROME  (Q9VAQ7), 
SLU7_EMENI  (Q5B3U2), SLU7_EREGS  (Q74ZN9), SLU7_HUMAN  (O95391), 
SLU7_MACFA  (Q4R4P2), SLU7_MAGO7  (Q51LA6), SLU7_MOUSE  (Q8BHJ9), 
SLU7_ORYSI  (A2YQU8), SLU7_ORYSJ  (Q6ZK48), SLU7_RAT(Q80ZG5), 
SLU7_SCHPO  (Q9Y7Y2), SLU7_XENLA  (Q3KQD1), SLU7_YARLI  (Q6C9T0), 
TOP3A_ORYSJ (C7J0A2), XRN2_CAEBR  (Q60SG7), XRN2_CAEEL  (Q9U299), 
XRN2_CHICK  (Q5ZIP4), XRN2_DROME  (Q9VM71), XRN2_HUMAN  (Q9H0D6), 
XRN2_MOUSE  (Q9DBR1), XRN2_NEUCR  (Q8WZX5), XRN2_PONAB  (Q5R4L5), 
Y4919_ARATH (Q8VZ67), YTH1_YEAST  (Q06102), ZCC18_HUMAN (P0CG32), 
ZCC18_MOUSE (Q8VD24), ZCH10_HUMAN (Q8TBK6), ZCH10_MOUSE (Q9CX48), 
ZCH10_RAT   (Q5EB97), ZCH12_BOVIN (Q08DL1), ZCH12_HUMAN (Q6PEW1), 
ZCHC4_BOVIN (E1BGQ2), ZCHC4_HUMAN (Q9H5U6), ZCHC4_MOUSE (Q8BKW4), 
ZCHC4_RAT   (D3ZV31), ZCHC4_XENTR (Q66IH9)
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UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

EIF3G_EREGS (Q759T4)


				
	

	

		PDB
[Detailed view]		
		
			84 PDB
			


			1A6B; 1AAF; 1CL4; 1DSQ; 1DSV; 1ESK; 1F6U; 1HVN; 1HVO; 1MFS; 1NC8; 1NCP; 
			
				1U6P; 1WWD; 1WWE; 1WWF; 1WWG; 2BL6; 2CQF; 2DI2; 2E1X; 2EC7; 2EXF; 2HQH; 
				2IHX; 2IWJ; 2JZW; 2L45; 2L46; 2L4L; 2LI8; 2LLI; 2M3Z; 2MQV; 2MS0; 2MS1; 
				2YSA; 2ZNF; 3E2U; 3NYB; 3TRZ; 3TS0; 3TS2; 5A9E; 5I1R; 5MPS; 5MQ0; 5O2U; 
				5UDZ; 5W0B; 5W0M; 5W0N; 5W0O; 5XJC; 5YLZ; 6BK8; 6DNH; 6EXN; 6ICZ; 6QDV; 
				6R22; 6R23; 6R24; 6RWG; 6T61; 6T63; 6T64; 6UCA; 6URG; 6URO; 7Q5B; 7S7B; 
				7S7C; 7VPX; 7W5A; 7W5B; 7Z4Y; 7Z4Z; 7Z52; 7ZGP; 7ZGR; 8C6J; 8E3I; 8E3Q
			
			

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