PROSITE entry PS50871
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General information about the entry
| Entry name [info] | C1Q |
| Accession [info] | PS50871 |
| Entry type [info] | MATRIX |
| Date [info] |
01-OCT-2004 CREATED;
29-MAY-2024 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00857 |
Name and characterization of the entry
| Description [info] | C1q domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=138; /DISJOINT: DEFINITION=PROTECT; N1=1; N2=138; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.7161536; R2=0.0081032; TEXT='NScore'; /CUT_OFF: LEVEL=0; SCORE=714; N_SCORE=8.5; MODE=1; TEXT='R'; /CUT_OFF: LEVEL=-1; SCORE=467; N_SCORE=6.5; MODE=1; TEXT='RR'; /DEFAULT: M0=-32; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-380; BD=-380; /M: SY='P'; M= 19, 21, -62, 3, 1, -65, -62, -65, 21, -34, -62, -60, 63, -56, 0, 29, 7, -26, -70, 24; /M: SY='P'; M= 17, 12, -11, -17, -67, 2, -61, -25, 14, -67, -61, -59, 53, 40, 10, -18, -11, 2, -71, 30; /M: SY='R'; M= -12, -74, -62, 5, -71, -6, -62, -57, -10, -31, 10, -58, 36, 40, 43, 27, -11, 28, -78, -66; /M: SY='P'; M= -18, -77, -66, -16, -7, -69, 24, -19, -62, -13, 19, -65, 84, 26, -67, 18, -56, 22, -75, -5; /M: SY='R'; M= -64, -80, 12, 7, -69, -73, 25, -68, 46, -25, 24, -55, 14, 37, 64, -59, -61, -25, -74, 6; /M: SY='S'; M= 13, -67, -65, 4, -64, -64, -70, 20, -63, -55, -54, -60, -6, -59, -68, 65, -46, 58, -82, -65; /M: SY='A'; M= 92, -62, -67, -61, -75, 1, -70, -64, -63, -67, -61, -61, -67, -60, -68, -5, -52, -16, -76, -71; /M: SY='F'; M= -76, -71, -88, -84, 122, -83, -68, -49, -79, -40, -51, -77, -86, -90, -76, -74, -67, -54, -40, -19; /M: SY='S'; M= -21, -67, -59, -60, 4, -58, 64, -67, -59, -66, 7, -49, -67, -53, -61, 81, 36, -63, -72, 39; /M: SY='A'; M= 71, 68, -74, -68, -66, -62, -76, -44, -68, -55, -54, -68, -73, -68, -72, -51, -53, 60, -83, -69; /M: SY='G'; M= 14, -71, -61, -6, -73, 45, -64, -21, 18, -37, -63, -53, -67, -54, 34, 31, 28, -22, -77, -68; /M: SY='L'; M= -67, -74, -75, -67, 27, -27, 26, -17, -55, 62, 12, -69, -80, -60, 61, -70, -64, -50, -69, -50; /M: SY='T'; M= -21, -68, -56, -18, -16, -62, -60, -69, 32, -71, -64, -5, -4, 4, 9, 56, 67, -62, -79, -64; /M: SY='H'; M= -59, -75, -11, 18, -72, 11, 52, -21, 21, -29, -61, -3, -10, 8, 42, -9, 35, -25, -81, -62; /M: SY='Q'; M= 0, -75, 11, -52, -78, 16, 39, -75, -8, -37, -65, 39, 47, 48, -12, 35, -54, -73, -81, -66; /M: SY='V'; M= -61, -72, -72, -66, 11, -78, 42, -2, -61, 25, 26, -66, 0, 1, 24, -21, 5, 44, -71, 23; /M: SY='P'; M= 11, -74, -59, 28, -4, -66, 18, 2, -18, -65, -60, -59, 66, 21, -62, 29, 15, -2, -77, -64; /M: SY='P'; M= 30, -73, -63, 5, 9, -2, -66, -56, -60, -30, -60, 22, 71, -61, -14, -11, -55, 29, -77, -66; /I: I=-26; MD=-67; /M: SY='D'; M= -28, -97, 34, -75, -96, -22, -83, -27, -80, -30, -86, -4, 29, -79, -20, 20, -75, -87,-106, -92; D=-26; /I: I=-26; MI=0; MD=-67; IM=0; DM=-67; /M: SY='P'; M= -1, -92, -7, -23, -85, -7, -72, -84, -64, -31, -75, -72, 57, 35, 25, -23, -72, -83, -85, 3; D=-26; /I: I=-26; DM=-67; /M: SY='N'; M= -61, -74, 49, -4, -5, 3, 10, -1, -57, -15, -62, 57, 28, -56, -19, 15, -5, -65, -79, 1; /M: SY='Q'; M= -57, -74, -57, 26, 13, 21, -56, -61, -54, -15, 17, -4, -68, 72, -58, 6, 23, -8, -68, 23; /M: SY='P'; M= -61, -78, -67, -60, -66, -27, -66, -7, -62, -27, -58, -65, 94, 21, -70, -57, 44, 17, -74, 22; /M: SY='I'; M= -15, -71, -84, -79, -50, -84, -79, 74, -76, 25, 37, -77, -76, -73, -77, -70, -56, 54, -77, -57; /M: SY='P'; M= -27, -77, -68, -59, -63, -74, 24, 1, 41, 1, -53, -65, 68, -58, 25, -63, -58, 34, -74, 7; /M: SY='F'; M= -72, -71, -78, 0, 116, -81, -67, -51, -73, -43, -52, -72, -81, -80, -73, -69, 7, -55, -44, -23; /M: SY='D'; M= -5, -73, 88, -43, -79, -20, -55, -71, -17, -76, -72, 63, -68, -55, -61, -15, 7, -6, -94, -70; /M: SY='K'; M= -21, -75, 22, 31, -75, -69, 13, -73, 66, -27, -63, -49, -64, 9, 28, -16, 33, -68, -79, -64; /M: SY='V'; M= -23, -69, -72, 5, -58, 20, -77, 28, -70, 4, -46, -69, -73, -69, -74, -61, 6, 73, -81, -63; /M: SY='L'; M= -6, -70, -74, -21, 40, -75, -64, 8, -67, 57, -41, -71, -77, -65, -4, 21, -58, -14, -64, 23; /M: SY='Y'; M= -60, -69, -71, -72, 48, -76, 8, 5, -68, -4, -48, 0, -75, -69, -70, -23, 44, 48, -61, 59; /M: SY='N'; M= -63, -68, -38, -58, -72, -53, 37, -72, -50, -15, -64, 119, -74, -51, -57, -47, -49, -75, -94, -67; /M: SY='R'; M= -63, -78, 39, 18, -61, -30, -59, 35, -51, 9, 11, -57, -3, 21, 43, -8, -14, -53, -74, 14; /M: SY='G'; M= -54, -78, -58, 4, -15, 81, -60, -82, -58, -77, -68, -4, -68, 69, -62, -50, -65, -79, -69, 5; /M: SY='N'; M= -12, -73, 35, 9, -80, 44, -56, -80, -54, -81, -72, 68, 16, 0, -14, 27, -53, -76, -84, -72; /M: SY='H'; M= -14, -74, 36, -56, -12, 22, 103, -69, -61, -68, -61, -2, -69, -55, -62, 21, -6, 1, -83, 6; /M: SY='Y'; M= -72, -77, -77, -76, 63, -80, -48, -50, -70, 22, -46, -75, -84, -68, -67, -70, -66, -56, 37, 112; /M: SY='D'; M= -65, -75, 84, -8, 7, -60, 26, -78, -15, -78, -72, 79, -69, 1, -57, -20, -54, -78, -90, -62; /M: SY='P'; M= -26, -77, -69, -18, -63, -30, -68, -49, -66, 35, 17, -9, 91, -65, -72, -63, -10, 16, -78, -68; /M: SY='T'; M= 34, -68, 1, 20, -6, -63, -60, -65, -50, -66, 7, -4, -65, 8, 30, 24, 54, -26, -79, -63; /M: SY='T'; M= -22, -63, -59, -60, -66, -65, 33, -59, -59, -8, -57, -48, -62, -59, -65, 32, 100, -53, -86, -62; /M: SY='G'; M= -49, -76, -63, -74, -82, 100, -69, -89, -68, -86, -75, -7, -68, -66, -76, -8, -65, -83, -75, -77; /M: SY='K'; M= -62, -77, -63, -51, -64, -75, -60, 8, 75, -61, -56, -57, -70, 22, 48, -60, -58, 33, -70, 21; /M: SY='F'; M= -75, -72, -87, -83, 119, -83, -65, -49, -78, -41, -51, -76, -86, -87, -75, -74, -67, -54, -39, 32; /M: SY='T'; M= -57, -68, -59, -62, -63, -26, -61, 0, -51, -32, -56, 43, -68, -57, 45, -47, 80, 10, -80, 6; /M: SY='C'; M= 61, 125, -75, -71, -71, -64, -76, -8, -71, -64, -62, -66, -79, -72, -76, -54, -57, -22, -87, -75; /M: SY='P'; M= -27, -78, -61, -54, -74, -64, 9, -69, 7, -75, -65, -11, 92, 23, -15, 36, 7, -26, -76, 5; /M: SY='V'; M= -59, -72, -69, 31, -10, -83, -67, 30, -64, -4, -45, -73, -75, -63, -9, -66, -56, 71, -68, 48; /M: SY='P'; M= 19, -81, -4, -4, -79, -65, -64, -71, -10, -24, -66, 0, 101, -58, 5, -18, -57, -71, -79, -75; /M: SY='G'; M= -49, -77, -64, -76, -83, 103, -71, -91, -70, -86, -75, -50, -68, -67, -77, -49, -68, -84, -74, -78; /M: SY='I'; M= -26, -71, -76, -73, 34, -80, -71, 53, -66, 8, -43, -10, -76, -69, 14, -64, 10, 52, -70, 3; /M: SY='Y'; M= -72, -81, -71, -74, 16, -78, -38, -56, -66, -52, -50, -72, -84, -62, -63, -66, -66, -61, -27, 132; /M: SY='Y'; M= -7, -75, -73, -68, 44, -76, 12, 10, -65, 23, -46, -69, -78, 21, -17, -13, -61, -12, -49, 86; /M: SY='F'; M= -74, -71, -88, -83, 115, -84, -68, -6, -79, 9, -47, -77, -85, -86, -76, -74, -66, -50, -44, -22; /M: SY='S'; M= 27, -64, -60, -59, -71, -21, -64, -13, -5, -67, -63, -50, -64, -54, -62, 76, 53, -17, -81, -66; /M: SY='Y'; M= 36, -71, -76, -73, 66, -72, -56, -47, -70, -19, -50, -72, -79, -69, -69, -61, -60, 26, -46, 90; /M: SY='H'; M= -60, -73, 24, -52, -70, -66, 115, -71, -57, -68, -59, 4, -66, 1, -57, 16, 56, -21, -95, -50; /M: SY='V'; M= 11, -69, -82, -76, -51, -80, -77, 54, -74, 27, 42, -76, -76, -72, -75, -66, -55, 65, -78, -59; /M: SY='H'; M= -57, 27, -55, 41, -66, -27, 82, -60, -58, -6, 9, -53, -66, -53, -61, 7, 60, 3, -87, -58; /M: SY='V'; M= -56, -70, -69, -64, 11, -22, 14, 7, 32, 2, 13, -61, 1, -61, -60, 23, 19, 47, -76, -57; /M: SY='W'; M= 5, -75, 11, -9, 34, -7, 39, -62, 12, -7, -57, -5, -73, -56, 33, -58, -11, -17, 44, 39; /M: SY='H'; M= 2, -76, -59, -17, -66, 22, 53, -70, -51, -2, -60, 31, 29, -3, 42, 11, -59, -70, 38, 7; /I: I=-29; MD=-75; /M: SY='D'; M= 3, 12, 43, -54, -79, 10, 38, -75, 0, -76, -69, 2, -72, 5, 30, 4, 22, -19, -88, -68; D=-29; /I: I=-29; MD=-75; /M: SY='E'; M= -24, -99, -12, 38, -99, -90, -81, -26, 4, -93, -88, -3, 12, -69, -10, -13, -78, -32,-103, -92; D=-29; /I: I=-29; MI=0; MD=-75; IM=0; DM=-75; /M: SY='H'; M= -26, 15, -13, 9, -70, -66, 58, -11, 30, -70, -63, 33, 53, -53, -55, 6, 34, -66, -79, 8; /M: SY='V'; M= 7, -68, -77, -73, -53, -8, -74, 29, -72, 43, 16, -71, -75, -70, -74, -61, 25, 52, -78, -60; /M: SY='Q'; M= -28, 43, -57, 30, -63, -68, -54, -74, 18, -71, -63, -56, -69, 71, 32, 23, -59, -72, 66, 45; /M: SY='V'; M= 23, -69, -79, -73, -7, -14, -75, 28, -72, 29, 25, -74, 15, -71, -75, -63, -56, 57, -76, -59; /M: SY='R'; M= 1, -72, 12, -59, 3, 20, 18, -59, -16, -27, -60, 22, -72, -56, 43, 27, -55, 24, -75, -1; /M: SY='L'; M= -67, -71, 7, -70, 34, -81, -67, -5, -74, 76, -36, -75, 16, -70, -74, -21, -61, -44, -68, -50; /M: SY='M'; M= -57, 16, -72, -67, -54, -7, 25, -45, -58, -47, 94, -63, -73, -58, 33, 22, -56, 38, -71, 40; /M: SY='K'; M= -29, -75, 11, -51, -70, -7, 33, -58, 66, -13, -57, -54, -70, 7, 40, -59, -59, 31, -78, -62; /M: SY='N'; M= -60, -70, 7, -54, -76, -18, 35, -78, -46, -81, -69, 104, -71, -49, 33, 25, -49, -77, -91, -67; /I: I=-42; MI=0; MD=-106; IM=0; DM=-106; /M: SY='G'; M= -58, -76, 48, 13, -74, 61, 50, -71, -58, -15, -65, 35, -69, -56, -14, -54, -61, -5, -84, -66; /M: SY='Q'; M= 12, -73, -60, 25, -62, -72, 24, -15, -18, 12, -51, -8, -70, 48, 19, -56, 8, 29, -75, 7; /M: SY='Q'; M= -4, -74, 25, -9, -66, -70, -64, 36, 17, -59, -56, -56, 22, 36, -15, 8, 21, 17, -77, -7; /M: SY='C'; M= -59, 68, -68, -6, -64, -78, -68, 5, 23, -6, -52, -65, 13, 34, 24, -63, -57, 53, -81, -65; /M: SY='M'; M= 22, -70, -81, -74, 11, -77, -73, 52, -73, 25, 57, -75, -7, -70, -74, -65, -57, 44, -73, -55; /M: SY='Q'; M= -58, 36, -6, 30, -15, -69, 10, 11, -19, -28, 7, -55, -69, 40, 27, 40, -8, -20, -75, 1; /M: SY='T'; M= 16, -66, -66, -64, 36, -22, -66, 9, 2, -2, 9, -56, -67, -61, -64, 43, 58, -51, -72, -55; /M: SY='H'; M= -66, 18, -65, 11, 51, -23, 70, -16, -19, -9, 35, -61, -74, -58, 4, -62, 4, -59, -58, 64; /M: SY='C'; M= 36, 86, 49, -19, -78, 24, -64, -76, -61, -74, -69, -51, -70, 21, -66, 23, -5, -67, -85, -72; /M: SY='Q'; M= -3, -77, 42, 16, -67, 1, 55, -73, -16, -33, -61, 4, -68, 71, -54, -18, -19, -72, -72, 41; /M: SY='Y'; M= 1, -74, 33, 7, 28, 22, 36, -65, -57, -16, -60, 23, -71, -57, 8, -17, -10, -18, -68, 40; /M: SY='Y'; M= 24, -71, -56, -5, -60, 3, -55, -69, 3, -70, -62, 32, -2, 24, -57, 30, 32, -65, -65, 60; /M: SY='D'; M= 12, -74, 59, -9, -75, 40, 24, -78, 20, -77, -69, -3, -66, -53, -5, 5, 9, -72, -79, -1; /I: I=-18; MD=-45; /M: SY='S'; M= -58, -77, -60, -59, -75, 13, -61, -72, 4, -25, -67, 46, 1, 34, 29, 47, -55, -20, 36, -68; D=-18; /I: I=-18; MI=0; MD=-45; IM=0; DM=-45; /M: SY='C'; M= -71, 53, 15, 48, -13, -80, -67, -83, 3, -81, -76, 14, -4, -9, -16, -63, 26, -79, -87, -2; D=-18; /I: I=-18; DM=-45; /M: SY='Y'; M= -63, -77, 0, -20, 16, 3, 39, -21, -62, 15, -56, -3, -8, -61, 11, 28, -60, -8, -70, 40; D=-18; /I: I=-18; DM=-45; /M: SY='D'; M= -3, -80, 62, 36, 9, 7, -59, -18, -52, -74, -70, 17, -70, 40, 16, -57, -62, -72, -81, -65; D=-18; /I: I=-18; DM=-45; /M: SY='Q'; M= -16, 28, -64, -59, -63, -68, 9, -50, -59, -23, 38, -7, 1, 53, -62, 18, 50, 35, -79, 2; /M: SY='A'; M= 66, -67, -66, -60, -68, 6, -66, 2, 3, 7, -54, -3, -69, 24, -62, -14, -11, -17, -76, -66; /M: SY='S'; M= -11, -64, -59, -59, -70, -55, -63, 1, -59, -68, -64, -48, -64, -53, -64, 94, 39, -17, -82, -65; /M: SY='N'; M= -57, -72, -59, -67, 43, 63, -61, -61, -62, -35, -61, 64, -73, 24, -67, -53, -59, 19, -72, -58; /M: SY='H'; M= -21, -70, 2, -61, 9, 41, 60, -71, -61, -18, -63, 31, -68, -56, -65, 58, 10, -68, -79, -59; /M: SY='V'; M= 48, -66, -71, -8, -60, -4, -71, -11, -67, 18, 36, -67, -71, -64, -70, -55, 7, 51, -79, -63; /M: SY='M'; M= -61, -71, -81, -76, -50, -83, 36, 57, -73, 29, 72, -74, -76, -69, -73, -70, -57, 55, -79, -54; /M: SY='L'; M= -8, -68, -83, -76, 8, -82, -72, 9, -76, 71, 15, -80, -81, -72, -75, -71, -59, 39, -72, -53; /M: SY='H'; M= -27, -81, -8, 36, -63, -71, 80, -73, 17, -26, -59, -54, 34, 51, 14, -58, -62, -73, -70, 47; /I: I=-36; MI=0; MD=-90; IM=0; DM=-90; /M: SY='L'; M= -67, -69, -84, -76, -41, -86, -68, -32, -77, 90, 24, -83, -84, -70, -74, -77, -63, -40, -71, -53; /M: SY='Q'; M= -25, -77, -50, 42, -5, -68, -53, -74, 12, -70, -62, 8, -65, 91, 28, -19, 21, -71, -74, -61; /M: SY='Q'; M= 19, -75, -14, 11, -67, -69, -60, -57, 38, -13, -57, -60, 32, 52, 14, -56, -58, 25, -73, 13; /M: SY='G'; M= -51, -77, -58, 19, -83, 95, -66, -89, -63, -84, -74, -3, -67, 4, -71, -50, -66, -83, -75, -76; /M: SY='D'; M= -66, -81, 103, 34, -86, -66, 36, -85, -51, -80, -76, -39, -65, 44, -57, -55, -59, -82, -95, -66; /M: SY='Q'; M= -2, -78, -49, 57, -65, -69, 26, -74, 11, -70, -62, -4, -66, 71, 23, -53, -10, -71, -67, 50; /M: SY='V'; M= -52, -66, -79, -74, -55, -82, -83, 4, -72, -42, -44, -73, -76, -75, -75, -61, 34, 95, -88, -62; /M: SY='W'; M= -67, 17, -77, -9, -4, -69, 17, -73, -66, -70, -70, -2, -75, -63, -70, 25, -70, -80, 158, 9; /M: SY='L'; M= -63, -70, -85, -78, 14, -86, -75, 42, -77, 66, -34, -81, -81, -74, -77, -74, -59, 46, -72, -52; /M: SY='Q'; M= -22, -77, -5, 55, 38, -74, -57, -63, 12, -31, -59, -58, -68, 57, 44, -58, -61, 8, -71, -55; /I: I=-36; MD=-90; /M: SY='L'; M= -5, -71, -79, -72, -55, -79, -75, -12, 9, 52, -43, -74, -79, -69, -69, -1, -16, 50, -81, -63; D=-36; /I: I=-36; MI=0; MD=-90; IM=0; DM=-90; /M: SY='D'; M= -70, -84, 58, -63, -20, 10, 23, -70, -24, -38, -73, -6, -80, -71, -75, -25, 23, 17, -97, -73; D=-36; /I: I=-36; DM=-90; /M: SY='N'; M= -23, -74, -6, 33, -72, 20, 10, -65, 10, -9, 36, 58, -5, 20, -14, -53, -12, -25, -81, -66; /M: SY='D'; M= 13, -75, 63, 8, -80, 48, 20, -82, -53, -79, -72, -7, -67, -53, 28, 19, -57, -75, -83, -69; /M: SY='W'; M= -4, -73, 1, -9, -12, 15, 7, -72, 23, -71, -65, -5, -67, 22, -4, 35, 28, -69, 58, 27; /M: SY='N'; M= -59, -73, -55, -19, -62, 52, -58, 29, -16, -5, -57, 75, -71, -59, -65, -53, -15, -58, -73, 25; /M: SY='A'; M= 50, -69, -8, 4, -74, 46, -66, -67, -60, -27, -64, -56, 7, -58, -14, 18, 6, -13, -78, -71; /M: SY='H'; M= -26, -75, -71, -65, -58, -74, 60, 45, 0, 28, 44, -64, 49, -61, -65, 2, -14, -18, -78, -57; /M: SY='Y'; M= -64, -76, -14, -20, 31, 1, 11, 3, -6, 3, -52, -63, 4, -60, 5, -15, -7, -17, -54, 79; /M: SY='S'; M= 8, -70, -3, -12, 1, 43, 13, -69, -19, -70, -65, -51, -66, -2, -63, 48, 33, -29, -73, 14; /M: SY='W'; M= -23, -73, 44, -12, -1, 9, -62, -13, -63, -13, 10, 17, 7, -60, -68, 30, -55, 22, 45, 12; /M: SY='P'; M= -59, -78, -1, 24, -76, -66, 35, 7, 21, -71, -63, 16, 55, 40, 9, 37, -54, -67, -80, -65; /M: SY='W'; M= -58, -75, -12, 30, -3, 36, 24, -21, -17, -27, -60, 32, -70, -2, -62, 2, -58, 15, 46, 29; /I: I=-38; MD=-97; /M: SY='D'; M= -8, -91, 34, -70, -89, -84, -81, -79, 19, -84, 15, -14, -87, -73, -18, -19, 13, -6, 27, -82; D=-38; /I: I=-38; MI=0; MD=-97; IM=0; DM=-97; /M: SY='Y'; M= -75, -90, 62, -63, -11, 20, 12, -81, -71, -77, 20, -6, -83, -7, -75, -69, -73, -83, -72, 66; D=-38; /I: I=-38; DM=-97; /M: SY='S'; M= -45, -65, -58, -60, -69, -55, -63, 17, -59, -67, -63, -47, -64, -53, -64, 94, 47, -55, -82, -65; /M: SY='T'; M= -6, -67, 11, -61, -61, -70, 35, 28, -61, -30, 8, -52, -65, -62, -67, -12, 86, -13, -81, -1; /M: SY='F'; M= -76, -71, -88, -84, 122, -83, -68, -49, -79, -40, -51, -77, -86, -90, -76, -74, -67, -54, -40, -19; /M: SY='S'; M= -17, -65, -59, -60, -14, -2, -61, -67, -59, -69, 34, -47, -64, -52, -63, 93, 29, -62, -79, -63; /M: SY='G'; M= -2, -75, -65, -75, -82, 100, -71, -89, -69, -85, -74, -51, -68, -67, -76, -49, -67, -81, -74, -77; /M: SY='F'; M= -25, -73, -83, -80, 102, -81, -63, 28, -75, -42, -48, -75, -83, -79, -74, -70, -64, -10, -43, 62; /M: SY='L'; M= -67, -69, -85, -77, 5, -86, -68, -5, -77, 86, 28, -82, -83, -71, -75, -77, -63, -39, -69, -51; /M: SY='L'; M= -63, -69, -84, -77, -45, -85, -70, 24, -76, 70, 62, -80, -80, -70, -74, -74, -60, 37, -74, -54; /M: SY='Y'; M= -26, -76, -71, -72, 70, 20, 26, -60, -14, -55, -54, -65, -79, -65, -64, -20, -64, -63, -41, 99; /M: SY='P'; M= -23, -81, -64, 8, -74, -27, 5, -66, 1, 10, -61, -65, 84, 6, -1, 16, -59, -30, -80, -71; /M: SY='D'; M= -23, -82, 71, -20, -6, -74, -68, -77, -68, -30, 7, 13, -77, -67, -74, 2, 36, -75, -96, -73; /M: SY='W'; M= -33,-102, -97, -33, -87,-100, -96, -32, -28, -13, 6, -92,-100, -90, -94, 1, 18, -84, 35, -8; /M: SY='E'; M= -39,-117, -25, 20,-118,-109, 6,-111, -31,-113,-108, -95, -16, -90, -98, -20, -30, -41,-126,-108; /M: SY='P'; M= -37,-119,-104, -32, -26, -38, 16,-108, -33, -40,-100,-102, 16, -99,-103, -29,-101,-109,-111, -14; /I: E1=0; IE=-380; DE=-380;» more |
Post-processing [info]
| COMPETES_HIT_WITH | PS50049 |
Numerical results [info]
| Total number of hits | 103 in 101 different sequences |
| Number of true positive hits | 103 in 101 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 2 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | C1q |
| Version [info] | 3 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
101 sequences
ADIPL_DANRE (A1A5X5), ADIPL_HUMAN (Q5T7M4), ADIPL_MOUSE (Q8R2Z0), ADIPL_XENTR (A4IH36), ADIPO_BOVIN (Q3Y5Z3), ADIPO_HUMAN (Q15848), ADIPO_MOUSE (Q60994), C1QA_BOVIN (Q5E9E3), C1QA_HUMAN (P02745), C1QA_MOUSE (P98086), C1QA_PIG(Q69DL0), C1QA_RAT(P31720), C1QB_BOVIN (Q2KIV9), C1QB_HUMAN (P02746), C1QB_MOUSE (P14106), C1QB_RAT(P31721), C1QC_HUMAN (P02747), C1QC_MOUSE (Q02105), C1QC_RAT(P31722), C1QL2_HUMAN (Q7Z5L3), C1QL2_MOUSE (Q8CFR0), C1QL3_HUMAN (Q5VWW1), C1QL3_MOUSE (Q9ESN4), C1QL4_HUMAN (Q86Z23), C1QL4_MOUSE (Q4ZJM9), C1QRF_HUMAN (O75973), C1QRF_MOUSE (O88992), C1QT1_HUMAN (Q9BXJ1), C1QT1_MOUSE (Q9QXP7), C1QT1_RAT (Q5XIG2), C1QT2_HUMAN (Q9BXJ5), C1QT2_MOUSE (Q9D8U4), C1QT3_HUMAN (Q9BXJ4), C1QT3_MOUSE (Q9ES30), C1QT4_HUMAN (Q9BXJ3), C1QT4_MOUSE (Q8R066), C1QT5_HUMAN (Q9BXJ0), C1QT5_MOUSE (Q8K479), C1QT5_RAT (Q5FVH0), C1QT6_HUMAN (Q9BXI9), C1QT6_MOUSE (Q6IR41), C1QT6_RAT (Q3T1I2), C1QT7_HUMAN (Q9BXJ2), C1QT7_MOUSE (Q8BVD7), C1QT8_HUMAN (P60827), C1QT9_BOVIN (Q0II24), C1QT9_MOUSE (Q4ZJN1), C1T9A_HUMAN (P0C862), C1T9B_HUMAN (B2RNN3), CAPR2_DANRE (Q5RJ80), CAPR2_HUMAN (Q6IMN6), CAPR2_MOUSE (Q05A80), CBLN1_BOVIN (P86437), CBLN1_HUMAN (P23435), CBLN1_MOUSE (Q9R171), CBLN1_PIG (P63181), CBLN1_RAT (P63182), CBLN2_HUMAN (Q8IUK8), CBLN2_MOUSE (Q8BGU2), CBLN2_RAT (P98087), CBLN3_BOVIN (Q17QF9), CBLN3_HUMAN (Q6UW01), CBLN3_MOUSE (Q9JHG0), CBLN4_HUMAN (Q9NTU7), CBLN4_MOUSE (Q8BME9), CO8A1_CHICK (Q7LZR2), CO8A1_HUMAN (P27658), CO8A1_MOUSE (Q00780), CO8A1_RABIT (P14282), CO8A2_HUMAN (P25067), CO8A2_MOUSE (P25318), COAA1_BOVIN (P23206), COAA1_CHICK (P08125), COAA1_HUMAN (Q03692), COAA1_MOUSE (Q05306), COLE_LEPMA (P98085), EMI1A_DANRE (F1QC17), EMIL1_HUMAN (Q9Y6C2), EMIL1_MOUSE (Q99K41), EMIL2_HUMAN (Q9BXX0), EMIL2_MOUSE (Q8K482), ENASE_CHICK (P0C7A1), ERFE_HUMAN (Q4G0M1), ERFE_MOUSE (Q6PGN1), ERFE_RAT(D4AB34), HIP_MYTED (P83425), HP20_BOVIN (Q2KIT0), HP20_TAMSI (Q06575), HP251_BOVIN (Q2KIX7), HP252_BOVIN (Q2KIU3), HP25_TAMSI (Q06576), HP27_TAMSI (Q06577), MMRN1_HUMAN (Q13201), MMRN1_MOUSE (B2RPV6), MMRN2_HUMAN (Q9H8L6), MMRN2_MOUSE (A6H6E2), OTO1A_DANRE (A5PN28), OTOL1_HUMAN (A6NHN0), OTOL1_MOUSE (Q4ZJM7), OTOL1_ONCKE (P83371), OTOL1_ONCMY (A0A060WQA3)» more
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| PDB [Detailed view] |
39 PDB
1C28; 1C3H; 1GR3; 1O91; 1PK6; 2JG8; 2JG9; 2KA3; 2OII; 2WNU; 2WNV; 4D7Y; 4DOU; 4F3J; 4NN0; 4OUL; 4OUM; 4OUS; 4QPY; 4QQ2; 4QQH; 4QQL; 4QQO; 4QQP; 5H48; 5H49; 5H4B; 5HKJ; 5HZF; 5KC5; 5KC6; 5KC7; 5KCA; 5KWR; 5YBZ; 6FCZ; 6U66; 6U6N; 6Z6V » more |