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PROSITE entry PS50969


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General information about the entry

Entry name [info] FCP1
Accession [info] PS50969
Entry type [info] MATRIX
Date [info] 01-MAR-2004 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50969
Associated ProRule [info] PRU00336

Name and characterization of the entry

Description [info] FCP1 homology domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=162;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=157;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2764904; R2=0.0218987; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=9720.5312500; R2=4.5313435; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=376; H_SCORE=11424; N_SCORE=10.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=193; H_SCORE=10595; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.


Total number of hits 92 in 91 different sequences
Number of true positive hits 92 in 91 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.92 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] FCP1 homology
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
91 sequences

037R_FRG3G  (Q6GZT9), CNEP1_BOVIN (Q1RMV9), CNEP1_CAEBR (Q61C05), 
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UniProtKB/Swiss-Prot
False negative sequences
1 sequence

TIM50_DICDI (Q55C70)

		
PDB
[Detailed view]
21 PDB

1T9Z; 1TA0; 2GHQ; 2GHT; 2HHL; 2Q5E; 3EF0; 3EF1; 3L0B; 3L0C; 3L0Y; 3PGL;
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