PROSITE entry PS51039
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General information about the entry
| Entry name [info] | ZF_AN1 |
| Accession [info] | PS51039 |
| Entry type [info] | MATRIX |
| Date [info] |
01-NOV-2004 CREATED;
02-JUN-2021 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51039 |
| Associated ProRule [info] | PRU00449 |
Name and characterization of the entry
| Description [info] | Zinc finger AN1-type profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=50; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=45; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.3496473; R2=0.0103997; TEXT='-LogE'; /CUT_OFF: LEVEL=0; SCORE=1313; N_SCORE=16.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=400; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-32; D=-120; I=-120; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='P'; M= 24, -74, -6, -26, -72, -67, -64, -37, 48, -13, -58, -59, 59, 25, -10, -41, 8, 13, -78, -68; /M: SY='K'; M= -21, -75, 47, -23, -74, -40, 34, -6, 60, -53, -62, -26, 12, 14, -29, -23, 12, 3, -82, -64; /M: SY='K'; M= 12, -71, -37, -48, 22, -28, -65, 4, 46, 14, -53, -12, -5, -57, 0, 12, 19, -16, -72, -58; /M: SY='K'; M= -24, -74, 12, -53, -77, 42, -62, -73, 55, -75, -22, -28, 20, -6, 7, 11, 22, -26, -78, -69; /M: SY='N'; M= -14, -72, -50, -31, -18, -36, 26, -70, 40, -72, -63, 80, 1, -5, 13, 3, -37, -20, -75, 21; /M: SY='H'; M= -31, -78, -59, -51, -74, -42, 87, -79, 35, -73, -61, -50, -22, -12, 80, -29, 17, -74, -81, -56; /M: SY='C'; M= -61, 154, -81, -81, -71, -77, -81, -78, -77, -69, -69, -67, -92, -85, -83, -64, -61, -66,-101, -82; /M: SY='S'; M= 21, 5, -26, -16, 27, -25, -28, -66, -20, -21, -62, -6, 34, 6, -63, 61, -19, -48, -72, -7; /I: I=-31; MD=-65; /M: SY='F'; M= -76, -24, -41, 0, 47, -94, 0, -19, -16, -17, 4, -82, -90, -77, -3, -80, -73, 39, -80, -16; D=-31; /I: I=-31; MD=-65; /M: SY='P'; M= -25,-102, -1, 6,-105, -57, -85, -99, 23,-102, -93, -78, 54, -33, -76, -14, -19, -96,-103, -96; D=-31; /I: I=-31; MI=-65; MD=-65; IM=-65; DM=-65; /M: SY='T'; M= 5, -79, 28, -61, -82, 18, 2, -80, 4, -81, -74, -56, -74, -17, 23, 14, 42, -53, -88, -28; D=-31; /I: I=-31; DM=-65; /M: SY='C'; M= -61, 154, -81, -81, -71, -77, -81, -78, -77, -69, -69, -67, -92, -85, -83, -64, -61, -66,-101, -82; /M: SY='R'; M= -34, -76, -56, -50, -77, -1, -55, -78, 51, -76, -65, 30, -13, 21, 73, 3, 13, -73, -77, -66; /M: SY='K'; M= -18, -77, -23, 29, -76, -70, -57, -47, 64, -32, -61, -53, -65, 59, 39, -21, -3, -15, -76, -65; /M: SY='K'; M= -29, -74, -65, -56, -62, -43, -61, 11, 57, 23, 5, -58, -71, -51, 52, 12, -5, -31, -73, -15; /M: SY='D'; M= -28, -71, 58, 40, -63, -75, -66, -43, -61, 14, -53, -58, -69, -59, -66, -58, 24, 57, -86, -65; /M: SY='F'; M= -57, -71, -68, -22, 65, 58, -66, -60, -67, -9, 39, -58, -71, -67, -71, -2, 43, -60, -64, -49; /M: SY='L'; M= -65, -69, -80, -74, 32, -83, -69, 3, -28, 70, 24, -76, -79, -69, -23, -70, 8, 12, -69, -50; /M: SY='P'; M= 4, -72, -66, -22, -17, -68, -65, -54, 0, 21, 37, -62, 65, 5, -63, 11, 41, -21, -76, -63; /I: I=-29; MD=-61; /M: SY='G'; M= -36, -96, -80, -90,-101, 62, -85, -38, -85,-101, -91, 31, -91, -9, -91, -47, -47, -96,-100, -96; D=-29; /I: I=-29; MI=0; MD=-61; IM=0; DM=-61; /M: SY='F'; M= -66, -72, -80, -75, 92, 3, -68, 21, -72, 8, -1, -71, -79, 20, -72, -31, -63, 9, -54, -15; /M: SY='K'; M= -22, -73, 6, 20, 12, -35, 15, -3, 43, -64, -33, 18, -10, -34, 11, -9, 31, -2, -77, -60; /M: SY='C'; M= -61, 154, -81, -81, -71, -77, -81, -78, -77, -69, -69, -67, -92, -85, -83, -64, -61, -66,-101, -82; /I: I=-36; MD=-77; /M: SY='D'; M= -26, -97, 58, -42, -97, -85, -76, -91, -1, -47, 20, -16, 16, -3, -12, -39, -77, -90,-105, -87; D=-36; /I: I=-36; MI=-77; IM=-77; DM=-77; /M: SY='R'; M= -7, -78, 15, -53, 0, 7, 43, -74, 1, -29, -61, -10, -73, 8, 80, -58, -63, -71, -71, 21; /M: SY='C'; M= -61, 154, -81, -81, -71, -77, -81, -78, -77, -69, -69, -67, -92, -85, -83, -64, -61, -66,-101, -82; /M: SY='G'; M= -52, -73, -32, -11, -78, 70, 19, -80, 28, -43, -69, 28, -67, -17, -58, 34, -25, -76, -78, -69; /M: SY='G'; M= -9, -74, -57, -6, -39, 45, 41, -36, 11, -30, -61, 33, -69, 30, 14, 6, -34, -20, -75, -2; /M: SY='N'; M= -60, -71, 24, -27, -64, -69, 4, 0, -9, -3, 28, 59, -71, -18, 21, -26, 25, 30, -85, -62; /M: SY='F'; M= -74, -73, -81, -79, 110, -81, 33, -51, -75, -44, -50, -73, -84, -79, -71, -71, -67, -29, -40, 63; /M: SY='C'; M= -62, 152, -81, -81, -30, -77, -79, -77, -77, -68, -68, -67, -92, -84, -83, -64, -61, -66, -94, -14; /M: SY='L'; M= 21, -70, -73, -70, -57, 43, -68, 19, -20, 48, 28, -64, -41, -64, -70, 8, -59, -48, -74, -62; /M: SY='K'; M= 15, -72, 23, 30, -74, -45, -58, -68, 48, -21, -11, -18, -65, 17, 3, 30, 5, -31, -79, -66; /M: SY='H'; M= -69, -81, -53, -53, -68, -71, 149, -86, -58, -68, -54, -43, -70, -47, -52, -59, -68, -86,-103, -37; /M: SY='R'; M= -30, -81, -64, -53, -12, -75, 38, -76, 0, -71, -62, -57, -8, -43, 105, -61, -64, -29, -76, -58; /M: SY='Y'; M= -28, 9, -69, -35, 48, -37, 67, -55, -67, 29, -48, -63, -50, -62, -66, 15, -19, -58, -54, 76; /M: SY='P'; M= 11, -78, -64, -6, -60, -6, -58, -66, -17, -31, 26, -63, 82, 4, -37, 15, -43, -66, -64, 58; /M: SY='E'; M= -3, -76, 39, 69, -17, -24, -59, -69, -13, -9, -1, -55, 14, -47, -2, -6, 5, -50, -79, -66; /M: SY='D'; M= -18, -76, 75, 3, -77, -39, -20, 3, 14, -71, -66, 23, -67, 37, -6, 7, -11, -21, -86, -66; /M: SY='H'; M= -27, -80, -54, -54, -65, -70, 146, -84, -58, -68, -54, -44, -70, -48, -53, -58, -67, -83, -96, 3; /M: SY='D'; M= 0, -74, 49, 16, -79, 32, 26, -78, 36, -77, -69, 18, -66, -23, -10, 21, -24, -40, -83, -67; /M: SY='C'; M= -27, 151, -81, -80, -70, -76, -80, -75, -76, -31, -66, -68, -91, -83, -82, -63, -61, -64, -99, -80; /M: SY='P'; M= -1, -74, -59, -10, -76, 23, -63, -71, -5, -75, -67, 5, 61, 11, -7, 38, 29, -31, 36, -68; /M: SY='F'; M= -16, -75, -62, 16, 62, 37, -3, -66, 18, -29, -60, -5, -14, -59, -28, -7, -29, -66, 17, 35; /M: SY='D'; M= 14, -76, 65, -12, -73, -3, -60, -32, 18, 5, -62, -8, 23, -54, 27, -34, -58, -29, -82, -67; /M: SY='Y'; M= 3, -74, -19, 16, 44, -10, 10, -14, -30, -15, -55, -1, -15, -59, -8, -12, -8, -26, -56, 71; /M: SY='K'; M= -12, -76, -25, -24, -72, -69, 32, 2, 62, -65, 8, -10, -68, 44, 40, 7, -56, -3, -77, -61; /M: SY='P'; M= 19, 5, -62, -14, -73, 27, -8, 2, 22, -23, -61, -20, 43, 12, -11, 19, -9, -41, -77, -68; /M: SY='A'; M= 38, -72, 34, 18, -75, -36, 37, -36, 12, -69, -22, 1, 6, -51, 21, -9, 13, -11, -83, -65; /M: SY='A'; M= 43, -70, -41, 8, -27, 38, -66, -7, -23, -35, -61, -18, -1, -57, 7, 27, -55, 1, -76, -67; /I: E1=0; IE=-255; DE=-255;» more |
Numerical results [info]
| Total number of hits | 80 in 64 different sequences |
| Number of true positive hits | 80 in 64 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 2 |
| Feature key [info] | ZN_FING |
| Feature description [info] | AN1-type |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
64 sequences
CUZ1_YEAST (P53899), SAP10_ARATH (Q9STJ9), SAP10_ORYSJ (Q69LE0), SAP11_ARATH (Q8VZ42), SAP11_ORYSJ (Q84PD8), SAP12_ARATH (Q67YE6), SAP12_ORYSJ (Q6Z541), SAP13_ARATH (Q9SCM4), SAP13_ORYSJ (Q5JLA7), SAP14_ORYSJ (Q852K8), SAP15_ORYSJ (Q0DJC7), SAP16_ORYSJ (Q0D5B9), SAP17_ORYSJ (Q6H595), SAP1_ARATH (Q6NNI8), SAP1_ORYSI (A2Z2J6), SAP1_ORYSJ (A3C039), SAP2_ARATH (Q8H0X0), SAP2_ORYSJ (Q942F8), SAP3_ARATH (Q9ZNU9), SAP3_ORYSJ (Q5JN07), SAP4_ARATH (Q9SJM6), SAP4_ORYSJ (Q6H7P8), SAP5_ARATH (Q9LHJ8), SAP5_ORYSJ (Q6H754), SAP6_ARATH (Q94B40), SAP6_ORYSJ (Q852K5), SAP7_ARATH (Q9SZ69), SAP7_ORYSJ (Q852K6), SAP8_ARATH (Q3EA33), SAP8_ORYSI (A2YEZ6), SAP8_ORYSJ (A3BDI8), SAP9_ARATH (O49663), SAP9_ORYSJ (Q7Y1W9), SMBP2_HUMAN (P38935), SMBP2_MESAU (Q60560), SMBP2_MOUSE (P40694), SMBP2_RAT (Q9EQN5), TMC1_YEAST (Q08422), Y8260_DICDI (Q55GW8), YHM5_SCHPO (O94338), ZFAN1_HUMAN (Q8TCF1), ZFAN1_MOUSE (Q8BFR6), ZFAN3_HUMAN (Q9H8U3), ZFAN3_MOUSE (Q497H0), ZFAN3_RAT (Q5U2M7), ZFAN3_XENLA (Q66J85), ZFAN4_HUMAN (Q86XD8), ZFAN4_MOUSE (D3Z3C6), ZFAN5_HUMAN (O76080), ZFAN5_MOUSE (O88878), ZFAN5_RAT (B5DF11), ZFAN6_BOVIN (Q3SZY7), ZFAN6_HUMAN (Q6FIF0), ZFAN6_MOUSE (Q9DCH6), ZFAN6_PONAB (Q5R7S6), ZFAN6_RAT (Q6DGF4), ZFAND_DICDI (Q55BU1), ZFN2A_HUMAN (Q8N6M9), ZFN2A_MOUSE (Q9JII7), ZFN2A_PONAB (Q5R966), ZFN2A_RAT (Q5U2P3), ZFN2B_HUMAN (Q8WV99), ZFN2B_MOUSE (Q91X58), ZFN2B_RAT (Q4KLG9)» more
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| PDB [Detailed view] |
11 PDB
1WFE; 1WFF; 1WFH; 1WFL; 1WFP; 1WG2; 1WYS; 1X4V; 1X4W; 5IJ4; 7QXW |