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PROSITE entry PS51069


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PURL: https://purl.expasy.org/prosite/signature/PS51069

Direct ScanProsite submission
General information about the entry

Entry name [info] GBP
Accession [info] PS51069
Entry type [info] MATRIX
Date [info] 01-JAN-2005 CREATED;
01-MAR-2016 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51069
Associated ProRule [info] PRU00402

Name and characterization of the entry

Description [info] GBP repeat profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=50;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=50;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.1471304; R2=0.0091322; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=915; N_SCORE=9.5; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=685; N_SCORE=7.4; MODE=1; TEXT='RR';
/DEFAULT: M0=-7; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 31 in 3 different sequences
Number of true positive hits 31 in 3 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 12
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] REPEAT
Feature description [info] GBP
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
3 sequences

GBPH_PLAFB  (P32072), GBP_PLAF7   (Q8I6U8), GBP_PLAFG   (P02895)