PROSITE entry PS51122
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General information about the entry
| Entry name [info] | CALPONIN_2 |
| Accession [info] | PS51122 |
| Entry type [info] | MATRIX |
| Date [info] |
01-JUN-2005 CREATED;
01-OCT-2013 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00808 |
| Associated ProRule [info] | PRU00474 |
Name and characterization of the entry
| Description [info] | Calponin-like repeat profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=26; /DISJOINT: DEFINITION=PROTECT; N1=3; N2=24; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.1444489; R2=0.0162099; TEXT='NScore'; /CUT_OFF: LEVEL=0; SCORE=485; N_SCORE=9.0; MODE=1; TEXT='R'; /CUT_OFF: LEVEL=-1; SCORE=300; N_SCORE=6.0; MODE=1; TEXT='RR'; /DEFAULT: M0=-8; D=-20; I=-20; B1=*; E1=*; MI=-105; MD=-105; IM=-105; DM=-105; ... A B C D E F G H I K L M N P Q R S T V W Y Z /I: B1=0; BI=-105; BD=-105; /M: SY='I'; M= -8,-27,-23,-35,-27, 0,-32,-21, 37,-22, 18, 29,-22,-22,-16,-22,-18, -8, 29,-22, -2,-24; /M: SY='G'; M= -4, -9,-26, -7, -5,-25, 9,-13,-27, -4,-28,-18, -2, 8, -5, 3, 7, -4,-22,-28,-23, -7; /M: SY='L'; M= -5,-23,-18,-23,-15, 3,-23,-18, 11,-25, 31, 11,-21,-25,-15,-18,-14, -3, 5,-25, -5,-15; /M: SY='Q'; M=-10, 0,-30, 0, 20,-40,-20, 10,-20, 10,-20, 0, 0,-10, 60, 10, 0,-10,-30,-20,-10, 40; /M: SY='M'; M= 8,-13,-15,-21,-13, -9,-11, -7, 4,-10, 2, 26,-11,-15, -2,-12, 0, -1, 3,-24, -9, -8; /M: SY='G'; M= 0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20, 0,-20,-20,-20, 0,-20,-30,-20,-30,-20; /M: SY='W'; M=-10,-15,-25,-20,-18, 6,-23,-11, -9,-12, -9, -9,-15,-20,-12,-12, -6, 14,-10, 29, 26,-15; /M: SY='N'; M= -4, 28,-17, 14, 0,-20, 0, 4,-20, -3,-30,-20, 45,-17, 0, -3, 19, 6,-24,-40,-20, 0; /M: SY='K'; M=-10, 0,-30, 0, 13,-33,-20, -4,-27, 38,-27, -7, 0,-10, 25, 24, -7,-10,-23,-20,-10, 19; /M: SY='G'; M=-10,-17,-27,-20,-23, 11, 22,-11,-21,-20,-13,-10,-10,-25,-23,-18,-10,-15,-18, -1, 10,-23; /M: SY='A'; M= 20, 2, 15, -1, -8,-25, -9,-18,-21,-12,-17,-17, -5,-17,-12,-20, 3, -5, -9,-31,-22,-10; /M: SY='S'; M= 4, 12,-13, 6, 0,-20, 0, -4,-20, -7,-30,-20, 25,-13, 0, -7, 31, 14,-16,-40,-20, 0; /M: SY='Q'; M=-10, 0,-30, 0, 20,-40,-20, 10,-20, 10,-20, 0, 0,-10, 60, 10, 0,-10,-30,-20,-10, 40; /M: SY='R'; M= -6, -2,-24, -2, 7,-27,-14, -3,-25, 18,-25,-10, 3,-12, 20, 22, 7, -1,-20,-26,-13, 12; /M: SY='G'; M= -2,-15,-28,-15,-20,-21, 47,-20,-26,-22,-11,-11, -7,-22,-20,-20, -7,-18,-21,-20,-23,-20; /M: SY='M'; M=-10,-14,-23,-21, -8,-12,-20, 3, 8, -4, 8, 42,-14,-17, 18, -4,-14,-10, -2,-20, -3, 5; /I: I=-6; MD=-32; /M: SY='T'; M= 0, 0, -7, -7, -7, -7,-14,-14, -7, -7, -7, -7, 0, -7, -7, -7, 14, 35, 0,-21, -7, -7; D=-6; /I: I=-6; MI=-32; IM=-32; DM=-32; /M: SY='N'; M= 7, 16,-20, 3, -7,-22, 16, -4,-22, -7,-25,-17, 29,-17, -7,-10, 8, -4,-22,-30,-22, -7; /M: SY='F'; M=-20,-27,-23,-35,-27, 67,-30,-10, 0,-25, 7, 0,-20,-30,-32,-17,-20,-10, -3, 15, 43,-27; /M: SY='G'; M= 0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20, 0,-20,-20,-20, 0,-20,-30,-20,-30,-20; /M: SY='T'; M= -1, -9,-13,-14,-11, -6,-18,-18, -3,-16, 3, -3, -7,-16,-11,-13, 10, 26, 1,-29, -9,-11; /M: SY='G'; M= -7,-12,-32,-10,-10,-27, 26,-15,-33, -5,-27,-17, -5, 5,-10, 3, -5,-15,-27,-22,-25,-13; /M: SY='R'; M=-20,-10,-30,-10, 0,-20,-20, 0,-30, 30,-20,-10, 0,-20, 10, 70,-10,-10,-20,-20,-10, 0; /M: SY='H'; M=-15, 20,-28, 20, 10,-30,-13, 30,-27, 0,-25,-11, 21,-15, 20, 1, 0,-10,-30,-32, -7, 14; /M: SY='I'; M= -5,-23,-18,-28,-23, 0,-31,-25, 24,-23, 18, 11,-20,-22,-20,-21,-11, 6, 23,-25, -5,-23; /M: SY='Y'; M=-15, -6, 6,-13,-18, 7,-23, 6,-11,-12,-11, -9, -1,-30,-12,-12,-11, -8,-15, -4, 32,-18; /I: E1=0; IE=-105; DE=-105;» more |
Numerical results [info]
| Total number of hits | 89 in 38 different sequences |
| Number of true positive hits | 89 in 38 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 7 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | REPEAT |
| Feature description [info] | Calponin-like |
| Version [info] | 3 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
38 sequences
CLPH_ONCVO (P37801), CNN1_BOVIN (Q2HJ38), CNN1_CHICK (P26932), CNN1_HUMAN (P51911), CNN1_MELGA (P37803), CNN1_MOUSE (Q08091), CNN1_MUSPF (Q9GK38), CNN1_PIG(Q08092), CNN1_RAT(Q08290), CNN1_SHEEP (Q7YRL2), CNN2_BOVIN (Q3SYU6), CNN2_HUMAN (Q99439), CNN2_MOUSE (Q08093), CNN2_PIG(Q08094), CNN2_PONAB (Q5RFN6), CNN3_BOVIN (Q32L92), CNN3_HUMAN (Q15417), CNN3_MOUSE (Q9DAW9), CNN3_RAT(P37397), MP20_DROME (P14318), MYPH_ECHGR (Q24799), TAGL2_BOVIN (Q5E9F5), TAGL2_HUMAN (P37802), TAGL2_MOUSE (Q9WVA4), TAGL2_RAT (Q5XFX0), TAGL3_BOVIN (Q3ZBY2), TAGL3_HUMAN (Q9UI15), TAGL3_MACFA (Q4R5J4), TAGL3_MOUSE (Q9R1Q8), TAGL3_PONAB (Q5R6R2), TAGL3_RAT (P37805), TAGL_BOVIN (Q9TS87), TAGL_CHICK (P19966), TAGL_HUMAN (Q01995), TAGL_MOUSE (P37804), TAGL_RAT(P31232), UNC87_CAEEL (P37806), YSE2_CAEEL (Q09936)» more
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