PROSITE entry PS51206
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS51206 |
| Entry name [info] | SF3_HELICASE_1 |
| Accession [info] | PS51206 |
| Entry type [info] | MATRIX |
| Date [info] |
01-MAY-2006 CREATED;
01-OCT-2013 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51206 |
| Associated ProRule [info] | PRU00551; PRU50000 |
Name and characterization of the entry
| Description [info] | Superfamily 3 helicase of DNA viruses domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=151; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=146; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=-1.8566823; R2=0.0044754; TEXT='NScore'; /CUT_OFF: LEVEL=0; SCORE=2762; N_SCORE=10.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=1868; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-15; D=-20; I=-20; B1=-700; E1=-700; MI=-105; MD=-105; IM=-105; DM=-105; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-105; BD=-105; /M: SY='E'; M= -34, -22, 47, 53, -51, -37, -37, 7, -12, -35, -41, 21, -8, 9, -38, -2, -21, 16, -63, -33; /M: SY='M'; M= -33, -55, -9, 18, -4, -29, -36, -5, 10, 6, 37, 29, 31, 21, -9, -11, -37, -21, 7, 8; /M: SY='W'; M= -20, -55, 14, -15, 38, -55, -31, 31, -21, -12, -10, -14, 7, -14, 30, -43, -31, 19, 50, -12; /M: SY='I'; M= -12, -32, 15, 15, -23, -38, 3, 32, 6, 1, 11, -6, -42, 8, -2, -6, 13, -8, -54, -4; /M: SY='F'; M= 1, -49, 0, -23, 35, -38, -31, -14, -37, 23, 5, -18, -16, -19, -20, -7, 10, 21, -8, 30; /M: SY='F'; M= -30, -7, -59, -34, 63, 1, -49, 32, -54, 38, 8, -53, -58, -53, -54, -40, -41, 5, -5, -5; /M: SY='W'; M= -37, -14, -46, -6, 15, -45, 19, -4, -15, 23, 15, -43, -52, 62, 0, -22, -30, -18, 70, 17; /M: SY='Q'; M= 4, -14, 8, 32, -34, -32, 5, 1, 5, -32, -14, 16, -46, 42, 14, -4, -5, -18, 1, -2; /M: SY='I'; M= 24, -13, -29, -49, 37, -52, -26, 41, -27, 13, 31, -30, -54, -19, -24, -34, -31, 11, 1, 11; /M: SY='L'; M= -16, 15, -62, -56, 29, -44, -49, 33, -54, 51, 21, -56, -59, -51, -42, -39, -33, 10, 23, 6; /I: I=-3; MD=-18; /M: SY='G'; M= 7, 14, -41, -13, 9, 48, -9, -39, 36, -43, -29, -10, -48, 11, -13, 6, -35, -49, -51, -15; D=-3; /I: I=-3; MD=-18; /M: SY='W'; M= -16, 19, -7, -24, -29, -15, 0, -34, -21, -2, 32, -12, -26, 10, -18, 10, 1, -17, 62, 59; D=-3; /I: I=-3; MI=0; MD=-18; IM=0; DM=-18; /M: SY='W'; M= -7, 34, -62, -57, 52, -46, -29, 21, -54, 33, 25, -54, -59, -53, -55, -7, -33, -4, 57, -24; D=-3; /I: I=-3; DM=-18; /M: SY='L'; M= -28, -50, -27, -50, 6, -47, -43, 17, -49, 50, -8, 15, -57, -26, -50, -27, 11, 11, -48, 27; D=-3; /I: I=-3; DM=-18; /M: SY='H'; M= -5, -53, -39, -13, -36, 18, 40, -31, 30, -23, -17, -29, 13, -8, 22, 1, 31, -32, -56, -18; D=-3; /I: I=-3; DM=-18; /M: SY='G'; M= -8, -27, -4, -18, -55, 56, -17, -57, 6, -39, -28, 55, -33, 11, -4, 0, -25, -54, -57, -27; /I: I=-6; MI=0; MD=-29; IM=0; DM=-29; /M: SY='T'; M= -32, 1, -31, -43, -1, -26, -9, 21, -14, -21, -32, 15, -15, -29, 13, -12, 51, 23, -25, 19; /I: I=-4; MI=0; MD=-23; IM=0; DM=-23; /M: SY='P'; M= -21, -57, 5, -8, -29, 11, -3, -41, 10, -50, -33, -16, 73, -19, 12, 16, 8, -50, -13, -15; /M: SY='K'; M= -27, -56, -3, 25, 1, -51, -2, -28, 67, -7, -38, -24, -46, -4, 7, -39, -31, -31, 56, 2; /M: SY='Q'; M= -25, -28, -19, 15, -58, -26, 43, -44, 51, -53, -42, -8, -27, 62, 44, -18, -39, -54, -56, -40; /M: SY='N'; M= -2, 24, -37, -37, -18, -42, -17, -3, 33, -21, 12, 55, -51, -22, 22, 0, -17, 15, -21, -41; /M: SY='C'; M= 9, 78, -53, -52, 25, -19, -47, 16, -49, 15, 16, -16, -55, -49, -52, -16, 20, -7, -12, 13; /M: SY='I'; M= -18, -52, -60, -54, 41, -60, -52, 47, -53, 34, 7, -54, 2, -35, -54, -41, -8, 18, 42, -1; /M: SY='W'; M= -22, -16, -60, -18, 54, -60, -53, 33, -52, 30, 13, -43, -57, -51, -53, -37, -36, 28, 72, -21; /M: SY='F'; M= -18, -26, -36, -55, 57, -60, -49, 29, -54, 46, 27, -56, -32, -52, -53, -51, -41, 2, 43, 3; /M: SY='Y'; M= -39, 6, -35, -32, 22, -34, 34, -12, 10, -23, -18, -29, -53, -22, -21, -17, 23, 6, 12, 80; /M: SY='G'; M= -23, -55, -42, -24, -61, 94, -49, -67, -47, -64, -53, -29, -47, -44, -45, -22, -46, -50, -53, -56; /M: SY='P'; M= -8, -58, 6, 13, -56, -12, -4, -15, -19, -41, -21, 3, 85, -29, -23, -1, 5, -31, -60, -51; /M: SY='G'; M= 19, -53, -43, -19, -56, 65, -48, -22, -26, -53, -45, -35, 48, -42, -23, -15, 5, -15, -55, -53; /M: SY='N'; M= 11, -30, 37, -31, -57, 23, -19, -56, 3, -57, -48, 61, -47, -12, 22, 16, -6, -51, -63, -48; /M: SY='N'; M= -20, 8, 0, -36, -51, -26, -34, -46, -33, -52, -45, 74, -45, -34, -41, 32, 65, -32, -69, -47; /M: SY='G'; M= -23, -55, -43, -55, -62, 96, -50, -69, -48, -65, -54, -29, -47, -46, -56, -28, -47, -62, -52, -57; /M: SY='K'; M= -41, -56, -34, -20, -58, -48, -37, -58, 100, -57, -45, -27, -42, -18, -2, -36, -36, -53, -51, -44; /M: SY='S'; M= -23, -44, -36, -39, -53, 27, -41, -51, -37, -54, -47, -24, -42, -32, -43, 80, 46, -43, -61, -46; /M: SY='T'; M= -30, -13, -42, -44, -36, -38, -38, -4, -22, -4, 23, 12, -46, -33, -45, -1, 71, 29, -23, 10; /M: SY='F'; M= -38, -49, -61, -57, 79, -61, -47, 23, -54, 37, -4, -54, -59, -56, -53, -48, 8, 0, -33, 15; /M: SY='C'; M= 34, 49, -41, -41, -22, -22, -47, 17, -9, 19, 4, -21, -51, 33, -43, -32, 4, -5, 23, -40; /M: SY='M'; M= -1, -51, 23, 12, -35, -27, -15, -43, 20, -28, 58, 52, -46, 20, -4, -17, -1, -43, -56, 0; /M: SY='S'; M= 21, -46, -50, -47, -14, -27, -31, 21, -35, 33, -4, -25, -51, -42, -48, 33, 6, 21, -55, -38; /M: SY='L'; M= -15, -50, -63, -57, 16, -63, -52, 51, -55, 57, 18, -57, -58, -51, -55, -51, -33, 15, -49, -31; /M: SY='M'; M= 9, -10, -44, -8, -40, -23, -23, 28, 13, 11, 30, -19, -49, 5, 23, 4, 10, -16, -54, -27; /M: SY='H'; M= 8, -52, -1, 6, -51, -8, 42, -52, 36, -31, -11, 38, -46, 24, 15, 9, -13, -49, -57, -11; /M: SY='L'; M= -4, -48, -59, -54, 47, -57, -47, 19, -41, 49, 38, -35, -57, -50, -51, -30, -18, 17, -44, -14; /M: SY='L'; M= -14, 24, -60, -55, 33, -47, -12, 14, -54, 53, 16, -35, -60, -51, -53, -49, -39, 29, -47, -1; /M: SY='G'; M= -30, -56, -21, -32, -36, 80, 0, -63, -3, -60, -50, -5, 17, 1, -25, -24, -33, -59, -52, -18; /M: SY='G'; M= -17, -14, 40, 0, -4, 43, -39, -29, -13, -21, -4, 11, -11, 0, -7, 5, -18, -23, -56, -24; /I: I=-4; MD=-21; /M: SY='Y'; M= -29, -34, -3, -3, -11, -41, 4, -53, -20, -25, -6, -14, -67, -3, -39, -34, -54, -33, -45, 69; D=-4; /I: I=-4; MI=0; MD=-21; IM=0; DM=-21; /M: SY='N'; M= 3, -16, -1, -26, -38, 35, 7, -39, 25, -40, -44, 52, -8, -22, 5, -7, 2, -16, -59, -34; /M: SY='C'; M= 2, 52, -38, -33, -28, -38, 4, 14, -10, -30, 20, -14, -15, -12, -45, -2, 11, 50, -59, -1; /M: SY='I'; M= 22, -48, -30, -26, -33, -30, -51, 45, -49, 25, 7, -48, -37, -46, -52, -12, 2, 35, -55, -14; /M: SY='S'; M= -3, -30, 0, -24, -34, -22, -36, -23, -35, -42, -27, 50, -9, -16, -41, 70, 17, -43, -63, -45; /I: I=-3; MD=-17; /M: SY='F'; M= -6, -36, -34, -27, 49, -33, -25, -1, -25, 9, 1, -24, 6, -50, -20, -29, -20, -7, -44, 28; D=-3; /I: I=-3; MI=0; MD=-17; IM=0; DM=-17; /M: SY='W'; M= 17, -50, -21, -18, 2, -41, 8, 11, -24, -25, -7, -7, 31, 1, -31, -9, 27, 24, 45, -22; /M: SY='N'; M= 0, -49, 0, -11, -44, 4, -23, -23, -31, 11, 30, 69, -2, -25, -18, -5, 3, -36, -60, -19; /M: SY='N'; M= -9, -33, 29, 28, -54, -24, 2, -33, 9, -39, -3, 41, -12, 17, -1, 40, -26, -48, -61, -28; /M: SY='K'; M= -9, -36, -11, 30, 10, -9, 4, -50, 43, -34, -22, 12, -45, 7, 24, 17, -14, -32, -53, -27; /I: I=-3; MD=-17; /M: SY='S'; M= -20, -51, 13, -41, -17, -3, -23, -39, -22, 18, -39, 19, -39, -37, -20, 59, -24, -38, -62, -44; D=-3; /I: I=-3; MI=0; MD=-17; IM=0; DM=-17; /M: SY='H'; M= -20, -54, -30, 5, -39, -17, 63, -37, 8, -52, -42, 51, -13, 36, 44, -1, -4, -52, -61, -39; /M: SY='F'; M= -31, -52, -49, -26, 90, -7, 33, -37, -34, -31, -35, 3, 28, -49, -25, -11, -26, -33, -33, -5; /M: SY='W'; M= -11, -62, 11, 32, -22, -10, -8, -34, 2, -51, -28, -13, 52, -12, -7, -34, -28, -29, 106, -24; /M: SY='L'; M= -25, -48, -55, -49, 40, -46, -45, -5, -28, 57, 10, -23, -31, -31, -3, -28, 17, -15, -46, -28; /M: SY='Q'; M= 30, -25, 1, 13, -56, 18, -18, -26, -32, -45, -22, 30, -35, 49, -26, 30, -11, -44, -58, -47; /M: SY='P'; M= -16, -11, 31, 8, -39, -11, -40, -9, -5, -29, 7, -5, 58, 1, 18, -5, -9, -7, -59, -37; /I: I=-4; MI=0; MD=-22; IM=0; DM=-22; /M: SY='L'; M= 4, 29, -59, -53, -26, -24, -23, 12, -45, 64, 5, -55, -59, -33, -52, -47, -40, 7, -4, -20; /M: SY='H'; M= 16, -15, -30, 12, 2, -6, 21, 18, -9, -16, -21, -20, -14, -3, 7, -17, 7, 8, -50, 14; /M: SY='G'; M= -26, -56, 55, 15, -60, 63, 14, -63, -22, -42, -52, 11, -32, -20, -19, -20, -35, -59, -61, -50; /M: SY='K'; M= 35, 17, -40, -29, -31, -38, -41, -38, 65, -47, -40, -33, -46, 17, 14, -7, -14, -3, -53, -29; /M: SY='R'; M= -35, -53, -43, -35, 8, -40, -37, -39, 36, 14, 10, -7, -36, -19, 63, -3, 6, -21, -51, -17; /M: SY='L'; M= 6, 7, -60, -41, 9, -57, -53, 31, -52, 40, 26, -55, -57, -50, -53, -35, -29, 40, 38, -25; /M: SY='V'; M= 19, 14, -50, -51, -10, 0, -51, 29, -48, -9, 10, 22, -54, -48, -52, -27, -26, 55, -59, -32; /M: SY='W'; M= -2, -2, -59, -53, 14, -57, -53, 36, -50, 29, 21, -38, -42, -49, -27, -25, -8, 36, 62, -13; /M: SY='W'; M= 20, 36, -28, -50, 19, 11, -51, 18, -49, 14, 17, -38, -38, -47, -52, -3, -15, 12, 62, -33; /M: SY='D'; M= -19, -54, 76, 38, -59, -23, -13, -34, -23, -56, -52, -3, 5, -29, -40, 34, -8, -38, -68, -48; /M: SY='E'; M= -42, -60, 75, 80, -63, -50, -32, -63, -19, -48, -54, -25, -39, -5, -34, -35, -38, -57, -67, -50; /M: SY='V'; M= 29, -13, -49, -45, -24, -5, -50, 21, -45, -4, -4, -15, 28, -10, -50, -6, 13, 38, -58, -43; /M: SY='T'; M= -22, -51, 16, 12, -32, 9, -39, -25, 38, -35, -5, 11, 8, 6, -16, -4, 46, -43, -58, -45; /M: SY='E'; M= -5, -54, 13, 28, -31, 6, 8, -8, 11, -26, 15, 6, 21, 1, -8, -7, -16, -15, -24, 13; /M: SY='G'; M= 2, -17, 20, -22, -3, 40, -21, -43, -13, -50, -44, 18, 2, 11, -23, 0, 23, -23, 2, 13; /I: I=-3; MD=-17; /M: SY='C'; M= -17, 74, -9, -19, -10, -2, -21, -17, -9, -40, -26, -15, -23, -17, 18, 11, -14, -26, -66, -50; D=-3; /I: I=-3; MI=0; MD=-17; IM=0; DM=-17; /M: SY='Y'; M= -14, -55, -14, 1, -12, 3, -10, -20, 22, -20, -20, -16, -50, 3, 27, -25, -2, -16, -7, 70; /M: SY='I'; M= -38, -16, -10, -13, 27, -23, -47, 44, -23, 14, 30, 7, -53, -19, -32, -43, -1, 18, 40, -21; /M: SY='D'; M= 4, -51, 70, -7, -23, -29, -39, -14, -17, -25, -17, 16, -48, -26, -6, 3, -9, 22, -65, -44; /M: SY='N'; M= -21, -37, 35, 49, -57, 5, -34, -43, -22, -53, -36, 52, -42, 13, -32, -3, 31, -28, -64, -49; /I: I=-5; MD=-27; /M: SY='S'; M= 10, -77, -45, -51, -76, -27, -70, -71, -33, -22, -66, -35, -35, -17, -69, 16, -59, -57, -84, -41; D=-5; /I: I=-5; MI=0; MD=-27; IM=0; DM=-27; /M: SY='Y'; M= -23, -24, 9, -30, -2, -17, -11, -6, -3, -10, -14, 49, -43, 7, 6, -13, 17, -14, -45, 50; /M: SY='F'; M= -4, -49, -61, -56, 45, -59, -50, 35, -54, 43, 36, -37, -58, -51, -53, -48, -38, 28, -3, -17; /M: SY='K'; M= -43, -57, -35, -18, -23, -50, -34, -43, 80, -53, -24, 7, -46, -4, 60, -36, -38, -45, -52, -41; /M: SY='N'; M= 18, -13, 16, -30, -53, -24, -16, -34, 22, -23, -27, 50, -47, 34, -4, 31, -8, -39, -24, -45; /M: SY='L'; M= 14, -49, -57, -52, 2, -26, 8, 34, -39, 45, 38, -51, -55, -46, -50, -38, -33, 12, -47, 16; /M: SY='T'; M= -23, 16, -50, -48, -7, -54, -49, -12, -46, 43, -1, -42, -50, -46, -50, -11, 64, 21, -28, -37; /M: SY='G'; M= -26, -52, 55, 1, -59, 60, -42, -58, -39, -58, -52, -17, -44, -37, -47, 15, 37, -52, -62, -51; /M: SY='G'; M= -30, -54, -22, -2, -59, 83, -25, -60, -42, -59, -50, 19, -26, -23, -37, -22, -8, -25, -56, -53; /M: SY='D'; M= -27, -18, 75, 25, -36, -41, -8, -35, -12, -55, -50, 44, -45, 10, -37, 14, -8, -52, -64, -1; /I: I=-4; MI=0; MD=-23; IM=0; DM=-23; /M: SY='P'; M= 2, -22, -14, -12, -28, -48, -26, -11, 24, -16, -8, -29, 55, 1, 1, -18, 35, -9, -7, 2; /M: SY='I'; M= -32, -13, -60, -56, -19, -63, -56, 59, -50, 14, 21, -33, -41, -51, -16, -47, -19, 58, -56, -20; /M: SY='S'; M= -21, 35, 1, -6, -23, -31, 10, -26, 7, -28, -5, 30, -35, -15, 27, 42, 18, -30, -60, -24; /M: SY='I'; M= 33, -31, -56, -51, -8, -19, -53, 44, -47, 22, -1, -49, -53, -46, -8, -24, -25, 36, -54, -38; /M: SY='D'; M= -31, -59, 70, 50, -57, -27, -32, -59, -15, -49, -51, 1, -10, -7, 41, -19, -38, -45, -62, -11; /M: SY='C'; M= -8, 50, -26, -30, 16, -43, 4, -19, 23, -16, -19, -39, -9, 25, 49, -29, -30, 4, -49, 10; /M: SY='K'; M= -24, -22, -38, -26, -49, -40, -19, -45, 86, -12, 34, -6, -21, -6, -11, -37, -36, -34, -17, -22; /M: SY='H'; M= -29, 6, -38, -23, 2, 36, 93, -55, -35, -42, -18, 11, -51, -33, 17, -15, -43, -54, -48, 46; /M: SY='K'; M= -36, -56, -35, 3, -52, -13, -35, -39, 67, -24, -27, 1, -46, 42, 39, -11, -28, -22, -52, -21; /M: SY='D'; M= 13, -51, 60, 1, -43, -7, -18, -54, -3, -55, -30, 46, -12, 6, -15, 8, 16, -49, -65, -47; /M: SY='P'; M= 8, -54, -27, -18, 18, -23, -19, -25, 15, -7, -19, -40, 68, -2, -19, 17, -3, -34, -14, -24; /M: SY='F'; M= -26, -18, -38, -36, 59, -57, -15, 22, -13, -1, -3, -29, -55, -26, 4, -40, 8, 28, -4, 32; /M: SY='Q'; M= -21, -30, 20, 42, -53, -45, -15, -27, -28, -29, -41, 1, -5, 63, -26, 23, 27, -27, -58, -15; /M: SY='F'; M= -16, -51, -53, -48, 58, -28, -22, 39, -46, 5, -1, -22, -38, 24, -32, -24, 6, 6, -39, 25; /M: SY='K'; M= -21, -53, -10, 4, -13, -39, -13, 10, 45, -25, -28, -6, -13, 14, 27, -34, 27, 5, -54, -18; /M: SY='P'; M= -27, 56, -48, -36, 42, -32, -18, -11, -36, -5, -11, 8, 74, -25, -35, -15, -38, -34, 11, -2; /M: SY='P'; M= -20, 17, -6, -15, -13, -38, -5, -26, -11, -41, -10, -21, 70, 6, 0, -8, 34, -20, -51, 24; /I: I=-5; MI=0; MD=-27; IM=0; DM=-27; /M: SY='P'; M= 9, -28, -88, -68, -57, -75, -91, -88, 73, -41, -27, -83, 174, -74, -26, -47, 18, -46, -23, -97; /M: SY='L'; M= -68, -17,-106, -94, 15, 0, -96, 17, 37, 91, 26, -92, -80, -36, -84, -85, 20, 47,-103, -70; /M: SY='I'; M= -85,-103,-121,-110, 10,-125, -7, 111,-106, 79, 57, -76, -64, -45,-107,-100, -48, 61, 76, -37; /M: SY='I'; M= -55, -39,-126,-116, 11,-127,-110, 129,-109, 63, 89,-111,-112,-103,-111, -84, -73, 76,-105, -65; /I: I=-6; MI=0; MD=-29; IM=0; DM=-29; /M: SY='T'; M= 43, -4, -20, -64, -67, -58, -90, -28, -82, -22, -51, -13, -68, -56, -93, 56, 128, -32,-120, -17; D=-6; /I: I=-6; DM=-29; /M: SY='T'; M= -21, 73, -81, -85, -70, 38, -88, -55, -80, -84, 69, -59, -88, -76, -92, 101, 127, -42,-122, -89; /M: SY='N'; M= -54, -33, -30, -72,-110, -59, -45,-106, -55,-122, -96, 227,-104, -58, -71, -46, -51, -84,-149,-101; /M: SY='H'; M= -8, -53, -19, 40, -23, -1, 68, 11, -21, -30, -27, 27, -32, -20, -39, -33, 12, -9, -55, 17; /M: SY='N'; M= -37, -53, 37, -15, -5, -48, -28, -14, 17, 20, 11, 43, 4, -12, 3, -21, -36, -24, -51, 24; /M: SY='P'; M= -20, -61, -38, -41, -26, -51, -38, 19, -45, -7, 10, -52, 99, -46, -54, -32, -37, 2, 6, -27; /M: SY='M'; M= -14, 14, -32, 8, -17, -35, 9, -5, 23, -1, 27, 14, -1, -20, 21, -21, 13, 8, -56, -19; /M: SY='I'; M= -10, -52, -33, -15, 32, -22, -36, 40, -11, -16, 6, -20, 23, -26, -13, -12, -6, 28, 10, -25; /I: I=-3; MD=-16; /M: SY='D'; M= -31, -59, 32, 7, -11, -12, -22, -24, 26, -43, -12, 16, -3, -24, 23, -24, -31, 5, -63, -36; D=-3; /I: I=-3; MI=0; MD=-16; IM=0; DM=-16; /M: SY='D'; M= -8, -51, 51, 28, -65, 10, -25, -29, -14, -60, -55, 29, -29, -16, -45, -7, -14, -32, -72, -56; D=-3; /I: I=-3; DM=-16; /M: SY='H'; M= -22, -41, -2, -5, -24, -18, 57, -36, 22, -52, -18, 20, -14, 7, 24, 0, 8, -24, -18, -29; D=-3; /I: I=-3; DM=-16; /M: SY='D'; M= -4, -55, 56, -32, -24, -16, -41, -44, -15, -29, -47, -31, -50, 2, -35, 24, 28, -40, 54, 21; D=-3; /I: I=-3; DM=-16; /M: SY='Q'; M= -27, -55, 6, 6, -5, 15, 12, -31, 31, -26, 6, 22, -1, 37, 19, -7, -26, -37, -53, -14; /M: SY='Y'; M= 38, -51, -44, -44, -4, 45, -39, -48, -43, -47, -42, -24, 28, -25, -47, -2, 12, -43, -40, 54; /M: SY='L'; M= -38, -50, -58, -44, 32, -61, -14, 42, -53, 48, 10, -39, -56, -50, -53, -38, 11, 16, 16, -11; /M: SY='W'; M= -24, -48, -26, 6, -5, -34, 42, -46, 12, -15, 3, -6, -50, 21, 17, 1, -42, -33, 108, 23; /M: SY='R'; M= -5, -54, 6, 5, -55, -44, -10, -44, -15, -53, -44, 10, -34, -3, 78, 34, -19, -34, -59, -44; /M: SY='R'; M= -46, -62, -42, -30, -54, -56, -31, -61, 7, -54, -43, -35, -54, -19, 106, -40, -40, -55, -14, -41; /M: SY='M'; M= -26, -51, -61, -44, 36, -61, -50, 46, -49, 30, 53, -54, -56, -23, -13, -49, -30, 25, 47, -26; /I: I=-3; MI=0; MD=-13; IM=0; DM=-13; /M: SY='M'; M= -14, -17, -49, -41, 2, -54, 1, 4, 10, 13, 34, -35, -14, 8, 33, -33, 7, 28, -14, -4; /M: SY='V'; M= -25, 27, -34, -32, -10, -41, -30, 42, -10, 20, -11, -13, -18, 11, -41, -35, -23, 45, -56, -30; /M: SY='F'; M= -36, -51, -60, -27, 61, -62, -53, 58, -39, 14, -5, -54, -56, -53, -54, -27, -38, 31, -41, -3; /M: SY='P'; M= -32, -21, 18, 25, -52, -46, 11, -52, 2, -51, -46, 22, 78, -19, -7, -13, 11, -44, -57, 8; /M: SY='F'; M= -51, -50, -42, -58, 103, -61, -45, -19, -30, 8, 13, -54, -62, -60, -51, -51, -32, -21, 2, 14; /M: SY='P'; M= -33, -52, 19, 20, -51, -45, -4, -43, 21, -18, 0, 38, 46, -26, -9, -3, 30, -10, -62, -46; /M: SY='H'; M= 8, -6, 0, 2, -34, -44, 64, -28, 18, -46, -39, 42, -7, -22, 25, -10, -10, 8, -63, -31; /M: SY='K'; M= -27, -53, -20, -13, -32, -48, 5, -15, 51, -36, -38, -11, 21, 33, 11, 8, 21, 5, -55, -16; /M: SY='F'; M= -13, 31, -44, -39, 76, -59, -22, 32, -33, 7, -8, -52, -28, -22, -51, -47, -40, 13, -2, 5; /M: SY='P'; M= -17, -41, 10, 7, -29, -13, -18, -40, -1, -29, -43, -11, 81, 0, -23, -4, 7, -28, -54, 2; /M: SY='P'; M= -16, -35, 13, 19, 16, 6, -19, -15, 1, 5, -8, 6, 40, -1, -28, -10, -7, -26, -52, -20; /M: SY='D'; M= 8, -53, 59, 20, -55, -15, 0, -47, 13, -39, -47, 26, -10, -11, 1, 11, -4, -37, -27, -25; /M: SY='E'; M= -23, -42, 30, 36, 11, -10, -22, -39, 31, -19, -21, 4, 7, 10, 2, 9, -14, -40, -55, -40; /M: SY='D'; M= -12, -30, 36, 3, -24, 15, -30, -19, 16, -50, -30, 27, -9, 6, 28, 8, -4, -22, -58, -26; /M: SY='D'; M= -21, -21, 48, 7, -27, 20, -40, 3, 17, 3, -38, 20, -48, -23, -26, -27, -5, -14, 9, -18; /M: SY='P'; M= -12, -54, -3, 7, 1, -29, -42, 15, 28, -21, -23, 13, 40, -18, -10, -9, 8, -12, 35, -17; /M: SY='P'; M= -9, -26, 29, 12, -53, -27, -1, -28, 8, -20, -43, 32, 56, 14, -1, -16, 4, -44, -12, -24; /M: SY='L'; M= 4, -4, -27, -5, -9, -26, -43, 18, 10, 30, -10, 5, 5, 3, -27, -8, -17, 1, -52, -12; /I: E1=0; IE=-105; DE=-105;» more |
Numerical results [info]
| Total number of hits | 143 in 143 different sequences |
| Number of true positive hits | 143 in 143 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 3 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 97.95 % |
Comments [info]
| Taxonomic range [info] | Bacteriophages, Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | N_Hulo |
| Feature key [info] | DOMAIN |
| Feature description [info] | SF3 helicase |
| Version [info] | 4 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
143 sequences
D5_FOWPN(P21969), H962R_ASFB7 (Q65162), H962R_ASFK5 (P0C9X2), H962R_ASFM2 (Q8V9U4), H962R_ASFP4 (P0C9X3), H962R_ASFWA (P0C9X1), LT_BFPYV(P13894), LT_POVBA(P14999), LT_POVBG(P0DOJ4), LT_POVBK(P03071), LT_POVBO(P24851), LT_POVHA(P03075), LT_POVJC(P03072), LT_POVK3(P0DOI7), LT_POVK6(P0DOI6), LT_POVKI(P0DOI5), LT_POVLY(P04008), LT_POVM1(P0DOJ6), LT_POVM3(P0DOJ5), LT_POVMA(P03073), LT_POVMC(P12905), LT_POVMK(P24597), LT_POVS1(Q3L6L5), LT_POVSM(A8Y984), LT_POVWU(A5HBG1), LT_SV40 (P03070), NS1_AADNV (Q90185), NS1_ADVG(P24030), NS1_AEDEV (P27454), NS1_DSDNV (O71153), NS1_FPV (P06431), NS1_FPV19 (P24842), NS1_HBOC1 (D0EZM8), NS1_HBOC2 (B9UYK5), NS1_HBOC3 (C5IY48), NS1_HBOC4 (C5IY43), NS1_JDNVP (Q90054), NS1_MEVA(P27438), NS1_MUMIM (P07300), NS1_MUMIP (P03134), NS1_PAVBP (P07296), NS1_PAVCN (P12929), NS1_PAVHH (P03133), NS1_PAVHU (P07298), NS1_PAVHV (Q9PZT1), NS1_PAVL3 (P36311), NS1_PAVPK (P52502), NS1_PAVPN (P18547), O22R_FRG3G (Q6GZV3), PG117_MONPV (A0A7H0DN89), PG117_VACCC (P21010), PG117_VACCW (P04305), PG117_VAR67 (P0DST7), PG117_VARV (P0DST8), PRIM_BPP4 (P10277), REP40_AAV2S (Q89269), REP52_AAV2S (Q89270), REP68_AAV2S (P03132), REP78_AAV2S (Q89268), V13_SPTNK (B4YNF3), VE1_BPV1(P03116), VE1_BPV2(P11298), VE1_BPV3(Q8BDD7), VE1_BPV4(P08344), VE1_BPV5(Q705G8), VE1_BPV6(Q705F4), VE1_COPV6 (Q89536), VE1_CRPVK (P03112), VE1_FPVL(P06455), VE1_HPV03 (P36719), VE1_HPV04 (Q07846), VE1_HPV05 (P06920), VE1_HPV07 (Q05133), VE1_HPV08 (P06420), VE1_HPV09 (Q05111), VE1_HPV1(P03111), VE1_HPV10 (P36720), VE1_HPV11 (P04014), VE1_HPV12 (Q05134), VE1_HPV13 (Q02261), VE1_HPV14 (P36721), VE1_HPV15 (Q05135), VE1_HPV16 (P03114), VE1_HPV17 (Q02512), VE1_HPV18 (P06789), VE1_HPV19 (Q02048), VE1_HPV20 (P50758), VE1_HPV21 (P50759), VE1_HPV22 (P50760), VE1_HPV23 (P50761), VE1_HPV24 (P50762), VE1_HPV25 (Q02049), VE1_HPV26 (P36722), VE1_HPV27 (P36723), VE1_HPV28 (P50763), VE1_HPV29 (P50764), VE1_HPV2A (P25481), VE1_HPV30 (Q05112), VE1_HPV31 (P17382), VE1_HPV32 (P36724), VE1_HPV33 (P06421), VE1_HPV34 (P36725), VE1_HPV35 (P27220), VE1_HPV36 (P50808), VE1_HPV37 (Q80902), VE1_HPV38 (Q80909), VE1_HPV39 (P24829), VE1_HPV40 (P36727), VE1_HPV41 (P27551), VE1_HPV42 (P27221), VE1_HPV44 (Q80915), VE1_HPV45 (P36728), VE1_HPV47 (P22419), VE1_HPV48 (Q80922), VE1_HPV49 (P36729), VE1_HPV51 (P26544), VE1_HPV52 (P36730), VE1_HPV54 (Q81020), VE1_HPV57 (P22153), VE1_HPV58 (P26543), VE1_HPV59 (Q81966), VE1_HPV5B (P26542), VE1_HPV60 (Q80943), VE1_HPV61 (Q80950), VE1_HPV63 (Q07847), VE1_HPV65 (Q07848), VE1_HPV66 (Q80957), VE1_HPV69 (Q9JH49), VE1_HPV6A (Q84293), VE1_HPV6B (P03113), VE1_HPV70 (P50765), VE1_HPV72 (Q81999), VE1_HPV73 (Q82007), VE1_HPVR7 (O40619), VE1_MMPV1 (P22154), VE1_MNPVA (Q84356), VE1_OVPVD (P03117), VE1_PAPVE (P11328), VE1_PCPV1 (Q02262), VE1_PCPVC (P81174), VF184_IIV3 (Q196T9), VF184_IIV6 (O55768), YL207_MIMIV (Q5UQ22)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
3 sequences
POL_BPNNR (M5AAG8), VU94_HHV6H (P0DTO4), VU94_HHV6Z (P0DTO3) |
| PDB [Detailed view] |
42 PDB
1N25; 1S9H; 1SVL; 1SVM; 1SVO; 1TUE; 1U0J; 2GXA; 2H1L; 2V9P; 4E2I; 4GDF; 5A9K; 5J40; 5J47; 5J4V; 5J4Y; 6K9C; 6K9E; 6LRB; 7APD; 7JSE; 7JSF; 7JSG; 7JSH; 7JSI; 8APL; 8APM; 8HWA; 8HWB; 8HWC; 8HWD; 8HWE; 8HWF; 8HWG; 8HWH; 8WGY; 8WGZ; 8WH2; 8XJ6; 8XJ7; 8XJ8 » more |