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PROSITE entry PS51236


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General information about the entry

Entry name [info] TSP_CTER
Accession [info] PS51236
Entry type [info] MATRIX
Date [info] 01-MAR-2007 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51236
Associated ProRule [info] PRU00635

Name and characterization of the entry

Description [info] Thrombospondin C-terminal domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=215;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=210;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.9005461; R2=0.0112374; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=-43306.7968750; R2=47.7637558; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=899; N_SCORE=12.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=410; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-20; I=-20; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Post-processing [info]

COMPETES_HIT_WITH PS51234

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.


Total number of hits 22 in 22 different sequences
Number of true positive hits 22 in 22 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Feature key [info] DOMAIN
Feature description [info] TSP C-terminal
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
22 sequences

COMP_BOVIN  (P35445), COMP_HUMAN  (P49747), COMP_MOUSE  (Q9R0G6), 
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PDB
[Detailed view]
4 PDB

1UX6; 1YO8; 2RHP; 3FBY