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PROSITE entry PS51373


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PURL: https://purl.expasy.org/prosite/signature/PS51373

Direct ScanProsite submission
General information about the entry

Entry name [info] HIPIP
Accession [info] PS51373
Entry type [info] MATRIX
Date [info] 01-APR-2008 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00515
Associated ProRule [info] PRU00705

Name and characterization of the entry

Description [info] High potential iron-sulfur proteins family profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=75;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=70;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.6121109; R2=0.0038724; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=11781.4560547; R2=2.8502581; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=1650; H_SCORE=16484; N_SCORE=9.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=1004; H_SCORE=14643; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-23; D=-80; I=-80; B1=-500; E1=-500; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 24 in 24 different sequences
Number of true positive hits 24 in 24 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] window20
Author [info] PS_Langendijk_Genevaux
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
24 sequences

HIP1_ECTMO  (P83341), HIP1_ECTSH  (P38941), HIP1_HALHA  (P04168), 
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PDB
[Detailed view]
28 PDB

1B0Y; 1CKU; 1EYT; 1HIP; 1HLQ; 1HPI; 1HRQ; 1HRR; 1ISU; 1IUA; 1JS2; 1NEH;
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