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PROSITE entry PS51408


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51408
Entry name [info] TRANSFERRIN_LIKE_4
Accession [info] PS51408
Entry type [info] MATRIX
Date [info] 01-DEC-2008 CREATED;
01-DEC-2008 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00182
Associated ProRule [info] PRU00741

Name and characterization of the entry

Description [info] Transferrin-like domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=324;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=324;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.8292463; R2=0.0083468; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=680; N_SCORE=8.5; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=297; N_SCORE=5.3; MODE=1; TEXT='RR';
/DEFAULT: M0=-40; D=-150; I=-150; B1=-1500; E1=-1500; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_01 which contains 572'970 sequence entries.


Total number of hits 80 in 41 different sequences
Number of true positive hits 80 in 41 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] Transferrin-like
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
41 sequences

ICA_MOUSE   (Q9DBD0), ICA_PIG (Q29545), MYP_STRPU   (P19615), 
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UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

TRFE_DRONO  (P85895)

		
PDB
[Detailed view]
207 PDB

1A8E; 1A8F; 1AIV; 1AOV; 1B0L; 1B1X; 1B3E; 1B7U; 1B7Z; 1BIY; 1BKA; 1BLF;
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