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PROSITE entry PS51467


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PURL: https://purl.expasy.org/prosite/signature/PS51467

Direct ScanProsite submission
General information about the entry

Entry name [info] HARP
Accession [info] PS51467
Entry type [info] MATRIX
Date [info] 01-FEB-2012 CREATED;
01-FEB-2012 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51467
Associated ProRule [info] PRU00800

Name and characterization of the entry

Description [info] HARP domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=76;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=71;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.7124363; R2=0.0121282; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=684; N_SCORE=9.0; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=511; N_SCORE=6.9000; MODE=1; TEXT='R?';
/DEFAULT: M0=-6; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 16 in 9 different sequences
Number of true positive hits 16 in 9 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] HARP
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
9 sequences

SMAL1_BOVIN (Q9TTA5), SMAL1_CAEEL (Q8MNV7), SMAL1_DANRE (B2ZFP3), 
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PDB
[Detailed view]
1 PDB

4O66