PROSITE entry PS51502
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| Entry name [info] | S_R_A_B_BARREL |
| Accession [info] | PS51502 |
| Entry type [info] | MATRIX |
| Date [info] |
01-AUG-2010 CREATED;
13-FEB-2019 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51502 |
| Associated ProRule [info] | PRU00835 |
Name and characterization of the entry
| Description [info] | Stress-response A/B barrel domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=95; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=90; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.5244322; R2=0.0074677; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=13160.9541016; R2=3.6318021; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=1002; H_SCORE=16800; N_SCORE=10.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=533; H_SCORE=15097; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-38; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='I'; M= -20,-123,-133, -79, 18, -87,-129, 75, -76, 16, -20,-127,-128, -86,-127,-120, -83, 52,-123, -38; /M: SY='R'; M= -66, -31, -37, 19, -46, -47, 18, -5, 33, -25, -7, -22,-120, 9, 52, -68, 12, -13, -28, 23; /M: SY='H'; M=-119,-132,-106,-104, -47,-122, 140,-135, -69, -98,-107, -31, -68, -20, 46, -80,-117,-133,-145, -92; /M: SY='I'; M= -18, 18,-129,-126, -58, -91, -15, 75,-123, -5, 9, -48,-125, -38,-126, -37, -1, 47,-129, -63; /M: SY='V'; M= -24, -7,-129,-125, -42, -86,-130, -2,-123, -6, -94, -73,-127,-124,-125, -55, 20, 90,-134,-111; /M: SY='M'; M= -52, -1,-131,-125, 58, -87, -39, -1,-122, 58, 69,-124,-129, -44, -41, -58, -34, -18, -41, -18; /M: SY='F'; M= -19, -23,-135,-129, 94, -72, -30, 17,-126, 20, -6,-126,-131, -65,-125,-121,-114, 6, 65, -45; /M: SY='K'; M= -44, -56,-107, -32,-123, -97, -53, -82, 80,-124,-115, 1, -86, 7, 46, 9, 26,-120, 44, -53; /I: I=-26; MI=0; MD=-65; IM=0; DM=-65; /M: SY='F'; M= -25,-121,-133,-127, 77,-130,-121, 2,-125, 45, -6,-127, -48,-125,-125, -55, -29, 21, 62, -20; /M: SY='K'; M= -27,-127, -27, -20,-126, -89, -14, -38, 86, -75,-114, 3, 32, -39, 26, -26, -22,-120,-126, -64; /M: SY='D'; M= -6,-127, 60, 50,-131, -27, -14, -95, 5, -79,-120, 6, 53, -41, -39, 4, -25, -83,-134,-121; /M: SY='D'; M= -10, -51, 48, 42, -38, 36, -34, -70, -39,-106,-120, -6, 33, -8, -27, 7, -8, -81,-131, -87; /I: I=-18; MD=-45; /M: SY='V'; M= 31, -63, -37, -58, -53, -37, -39, -1, -45, -12, -49, -53,-130,-124,-128, -31, 27, 43,-139, -75; D=-18; /I: I=-18; MI=0; MD=-45; IM=0; DM=-45; /M: SY='T'; M= -27,-126, 11, -32,-131, -24, -29,-126, -3,-106,-123, -13, 7, -68, -34, 49, 62, -63,-141,-125; D=-18; /I: I=-18; DM=-45; /M: SY='P'; M= 20,-132, 42, 22, -95, -87,-117, -76, -16, -54, -39, -31, 46, 21, -10, -24, -7, -59, -37,-125; D=-18; /I: I=-18; DM=-45; /M: SY='E'; M= 31,-124, 31, 76, -44, -58, -65,-122, -25, -77,-117, -29, -38, 24, -27, -7, -22, -35, -29,-118; /M: SY='Q'; M= -11, -70, 44, 43, -53, -86, 24, -64, -29, -68, -23, 31, -39, 65, -6, -27, -24, -6, -40, -80; /M: SY='I'; M= -5, -47,-118, -12, -72, -42, -35, 48, 24, 3, -11, -71,-122, -3, 31, -69, -26, 37,-126, -71; /M: SY='E'; M= 28,-124, 42, 48, -70, -49, -14, -77, 11, -23, -17, -24, -31, 38, 1, -30, -10, -49,-129,-115; /M: SY='E'; M= 34,-122, 14, 47, -36, -31, -36, -76, 24, -57, -38, -17, -58, 26, 17, -2, 4, -51,-127,-115; /M: SY='M'; M= 14,-119,-128, -71, 37, -78, -3, 33, -53, 31, 45,-121, -80, -71, -80,-114, -17, 39, 22, -49; /M: SY='M'; M= -16, -4, -76, 13, -32, -68, -40, 22, 16, 35, 46, -66,-121, -5, 8, -39, -29, 16,-123, -22; /M: SY='E'; M= 26,-124, 48, 56,-129, -32, -14, -51, 20,-123,-117, -4, -67, 30, 10, 2, -50, -78,-130,-117; /M: SY='G'; M= 26,-122, 23, 13,-120, 33,-110, -15, -4, -23, 15, -14, -54, 19, -9, 13, -13, -59,-126, -24; /M: SY='L'; M= -24, 15,-129,-124, 35, -37, -65, 17, -63, 64, 31,-123,-128, -65, -81, -93, -21, -21, -30, 23; /M: SY='R'; M= 6, -73, -32, 39, -58, -14, -7, -46, 13, -6, -3, 12,-117, 21, 44, 9, -40, -41, -29, -36; /M: SY='A'; M= 47,-119, 20, -30,-125, 6, -15, -65, 20, -66,-114, 6,-115, 21, 7, 32, 12, -78,-129,-116; /M: SY='L'; M= -42, -42, -80,-122, -17,-130, -64, -15,-121, 78, 72,-126,-129, -27, -71, -82, -58, -21,-119, -16; /M: SY='K'; M= 24, -30, -72, -46, -80, -26,-112, -54, 57, -14, -73, -22, 43, 10, 7, 8, -28, 0,-125, -66; /M: SY='D'; M= 19,-121, 37, 9, -81, 30, 12,-122, 1, -55,-115, 31, -53, 3, -14, 22, 2, -55,-129, -24; /I: I=-14; MD=-35; /M: SY='K'; M= -15, -49, -15, 12, -85, -54, 22, -33, 40, -14, -48, -10,-122, 40, -12, -4, 1, -2,-133, -61; D=-14; /I: I=-14; MI=0; MD=-35; IM=0; DM=-35; /M: SY='I'; M= -41, -5,-123, -68, -27, -99, -22, 75, 9, -4, 0, -22, -15, -38, -57, -25, -33, 39,-125, -54; /M: SY='P'; M= -47,-131, 26, 28,-131, -35,-112,-123, 1, -90,-118, -75, 103, -65, -13, 5, -26, -67,-129,-124; /M: SY='Y'; M= -36, -82, -51, 26, -23, 60, 19, -89, -81, -48, -32, -60, -40, -4, -57, 8, -4, -18, -2, 61; /M: SY='I'; M= -33, -56, -60,-124, -20, -86, -52, 76, -78, 32, 44,-122, -88,-119, -56, -58, -50, 42,-123,-104; /M: SY='K'; M= -44,-121, -34, -44, -76, -38, -6, -3, 47, 30, -15, -63,-120, 14, 38, -24, 2, 27,-125,-108; /M: SY='S'; M= 10,-119, 5, 23, -32, -22, 16,-117, -7, -28, -34, 14,-115, 27, -22, 62, -16, -58, 0, -11; /M: SY='F'; M= -16, -30,-129, -47, 65,-128, -59, 41, -79, 21, 19,-123,-127, -56,-121, -45,-109, 32, 61, 33; /M: SY='H'; M= -13,-122, -4, 46, -42, -65, 52, -19, -17, -93, -64, -11, -50, 34, 14, 33, 24, -27, 7, -19; /M: SY='W'; M= 28, 14, -88,-119, 22, -9, 27, 14,-118, -10, -29,-117, -74, -44,-120, -32, -33, 53, 75, 4; /M: SY='G'; M= -20, -35, -29, -34, -49, 96, -38, -75, -34, -84, -21, -43,-116,-111, -68, -12,-112, -95,-123,-121; /M: SY='P'; M= -9, -48,-110, 3, -84, -51, -12, 3, 25, -31, -34,-107, 52, -4, 46, 1, 25, -3, -18, -39; /M: SY='N'; M= -11, -30, 63, -62, -81, -63, -15, -28, -59, -91, -58, 85, 30, -14, -41, -4, -18, -8,-137,-117; /M: SY='F'; M= 4, -30, -23, -24, 40, -89, 9, 16, -46, 15, 12, 30,-121, -30, -14, -6, 2, 29,-120, -45; /I: I=-24; MI=0; MD=-61; IM=0; DM=-61; /M: SY='S'; M= -35,-119, 34, -22, -86, 27, -29, -96, -31, -46,-116, 13, 18,-101, -24, 74, 11, -69,-130, -75; /M: SY='P'; M= -33, -73, 42, -19, -2, -23, 16, -7, -45, 7,-106, -70, 66, -34, -24, -1, 27, -20, -7, -69; /M: SY='E'; M= 22,-123, 17, 68,-127, -50, -13,-124, -28,-123, -62, 8, 20, 16, 28, 20, -46, -58, -48,-117; /I: I=-6; MD=-15; /M: SY='G'; M= -37,-146, -15,-128,-145, 32, -33, -18, -30, -86, -30, 22, 29, -2, -17, -89, -39, -81,-149,-139; D=-6; /I: I=-6; MI=0; MD=-15; IM=0; DM=-15; /M: SY='R'; M= -44, -39, -38, -86, -50,-144, -27, -34, -7, 12, 1, -39, -75,-124, 48, -45,-130, -21, -4,-128; D=-6; /I: I=-6; DM=-15; /M: SY='S'; M= 22, -30, 28, 9,-135, -33, 4, -86, -81,-130, -67, 2,-126, 20, -51, 38, -13, -15,-143,-126; D=-6; /I: I=-6; DM=-15; /M: SY='Q'; M= -36, -52, -22, 3, -61, 19, 3, -63, 45, -82, -30, 4, -14, 48, 21, -25, -58, -47,-132,-120; D=-6; /I: I=-6; DM=-15; /M: SY='G'; M= -13,-124, 13, -12,-129, 69, -28, -88, -28,-130,-122, 23, -20,-107, -24, 31, 3,-124,-130, -63; D=-6; /I: I=-6; DM=-15; /M: SY='Y'; M= -28, 4, -67,-122, 72, -63, 3, -30, -79, -57, 15, -56, -50, -66, -87, -44, -86, -43, 80, 99; /M: SY='D'; M= -70,-120, 79, -5, -68,-114, -5,-118,-103, -52,-115, -13, -38, 22, -49, 17, 73, -53,-138,-114; /M: SY='H'; M= -87,-123, -24, -72, 47, -90, 99, 14,-115, 2, 20,-110,-124, -33, -69,-114, -50, 29, 3, 49; /M: SY='A'; M= 56, 22,-120,-118, -34, 46,-120, -4,-116, -64, 35,-110,-119,-114,-120, -3, -62, 42,-126,-114; /M: SY='F'; M= -4,-119,-130, -88, 72,-126, -21, 8,-122, 51, -19, -76,-128,-121,-122, -26, -75, 15, 62, -13; /M: SY='V'; M= -57,-120, -52, -1, -7,-125, 5, 35, -21, -13, 5, -54,-121, -44, -16, -2, 5, 59, -9, 35; /M: SY='M'; M= 31, 17,-117, -63, -36, -32,-116, 12,-113, -9, 46,-109,-118, -10,-116, 45, 29, 31, -29, -58; /M: SY='T'; M= -48, -42, 40, 45, -23,-121, -46, -23, -21, -34, -55, -50,-115, -2, 34, -49, 53, 14,-127, -6; /M: SY='F'; M=-121, -27,-133,-129, 117,-131, 24, -51,-125, -7, -96,-123,-133,-131,-123,-121,-114, -3, -95, -1; /M: SY='E'; M= 37,-122, 46, 55, -74,-113, -14,-120, 12, -85, -59, -10, 16, -1, -4, -20, -8, -28,-130, -65; /M: SY='D'; M= -50, -48, 71, -97, -83, -13, -50, -90, -71,-126,-120, 58,-115, -60,-110, 71, 20,-119,-137, -57; /M: SY='K'; M= 14, -64, -45, 27, -45, -91,-112, -22, 36, 25, 17, -54, 19, -20, 8, -36, 6, 0, -16, -65; /M: SY='E'; M= 41,-123, 51, 76,-128, -32, -58, -76, -30,-122,-117, -47, -54, 29, -69, -32, -29, -67,-129, -66; /M: SY='D'; M= 54,-121, 86, 14, -78, 12, -14,-123, -69,-123,-119, -42,-115, -71, -70, -45, -40, -48,-133, -43; /M: SY='L'; M= -63, -43,-124, -53, 7,-129, 20, -11,-107, 62, 43,-120,-127, -23, 47,-118,-111, -5, -8, 25; /M: SY='D'; M= 18,-125, 74, 35, -76, -83, -49, -73, 19, -49,-115, 11,-115, 39, 19, -42, -53, -71, -27, -56; /M: SY='Y'; M= 42,-119, -23, 16, -29, -9, -14, -19, -22, -33, -58, -48,-117, -20, 12, -16, 27, -9,-115, 55; /M: SY='Y'; M= -84, -52,-121, -79, 30,-127, -90,-103, -74, -63, -50,-121, -45, -61,-112,-115,-114, -33, -27, 132; /M: SY='Q'; M= 26,-122, 30, -27, -31, -60, -50, -16, -15, 16, -6, -9,-120, 62, -14, -27, -27, -1, -10, 8; /I: I=-21; MI=0; MD=-53; IM=0; DM=-53; /M: SY='T'; M= 7,-120, 17, 31, -79, -58, -34, -21, 17, -70, -25, 22, -11, 11, -37, 10, 32, 20,-130, -60; /M: SY='H'; M= -66, -56, 51, -7,-121, -63, 126,-132,-104,-123,-111, 30,-117, -98, -72, 23, -66,-129,-144, -40; /I: I=-20; MI=0; MD=-50; IM=0; DM=-50; /M: SY='P'; M= -2, -53, -7, 5,-132, -84, -24,-122, -24,-129, -50,-115, 118, -71, -72, -66,-107, -77,-129,-127; /M: SY='A'; M= 55, -59, 30, 35, -17, -58, -20, -31, -45, -7,-106, -49,-117, -15, -28, -33, -8, 0,-122, 15; /M: SY='H'; M=-117,-129,-104,-104,-109,-121, 147,-126, -73, -50,-101, -95,-120, -22, -36, -78, -76, -54,-135, 36; /M: SY='Q'; M= -3,-123, -10, -11,-110, -52, 3, -28, 22, 22, 22, -47,-120, 62, -4, -82, -37, 27, 43, -35; /M: SY='A'; M= 52,-122, 20, 48,-126, -37, -47, -73, 34, -72,-114, -20, -44, 19, 16, -24, -49, -67, -5,-116; /M: SY='F'; M= 4, 1, -72, -92, 73, -67, -11, 21, -94, 14, 2, -78, -87, -69, -75, -61, -18, 43, -2, -24; /M: SY='V'; M= 24,-120, -38, -70,-112, 6, -26, 32, 38, -31, -38, -76,-119, 7, -19, -17, -31, 43, 11, -61; /I: I=-24; MI=0; MD=-61; IM=0; DM=-61; /M: SY='K'; M= 26,-122, 26, 40, -78, -25, -51,-123, 44,-122, -36, -8, -47, 9, 29, 7, 2, -68,-128,-116; /M: SY='W'; M= -19, -67, -33, 11, 39, -38, 31, -24, 18, 18,-101, -24,-122, 2, 14, -38, -18, -25, 47, 31; /I: I=-17; MD=-42; /M: SY='F'; M= -1, 8,-129,-125, 48, -54, -57, 43,-122, 17, -8, -29,-128, -48, -60, -46, -48, 47, -17, -17; D=-17; /I: I=-17; MI=0; MD=-42; IM=0; DM=-42; /M: SY='K'; M= -11, -29, 10, 29, -52, 2, -47, -50, 42, 5, 5, -55, -52, 2, 24, -2, -25, -36, 33, -76; /M: SY='P'; M= -8, -59, -18, -16,-125, -10, 20, -69, -20, -44, -46, -19, 93, -11, -26, 21, -23, -24, -43, -70; /M: SY='V'; M= -10, -68, -64, 3, 14, 0, -65, 21, -42, 24, 10, -4,-123, -36, -31, -72, -27, 38, -35, 28; /M: SY='W'; M= 24, 24, -89, -34, -8, -67, -61, 16, -16, 3, -10, -56, -31, -65, 15, -31, -5, 37, 69, -19; /M: SY='E'; M= 21,-123, 42, 72,-127, -29, -63, -37, -30, -94,-117, -27, -32, -1, -17, 23, -11, -62,-131, -71; /M: SY='D'; M= -35, -71, 46, 16,-127, 17, -74, -61, 42, -49,-116, -20, -4, 26, 15, 23, -5, -76,-129, -84; /M: SY='R'; M= -15,-122, -43, -36, 0, -83,-116, 25, -69, -8, -11,-114, -28, -46, 52, -6, 2, 48, 25, -18; /M: SY='I'; M= 1, -39, -87, -37, -17, -83, -62, 39, -12, 29, 13,-117,-123, 17, -16, -41, 7, 37,-125, -59; /M: SY='V'; M= 26, 28,-123, -36, -74,-122, -26, 6,-114, -85, -1,-117, -70, -73, -2, -2, 10, 72,-132, -41; /M: SY='V'; M= 5, -8,-129, -80, 46,-129, -49, 37,-122, -2, 9, -83, -73,-122, -76,-115, -28, 55, -32, 40; /M: SY='D'; M= -69, -57, 110, -21, -44, -69, -21,-131,-105, -59,-125, -4, -66, 17, -66,-106,-109,-129,-140, -1; /M: SY='Y'; M= -34,-124,-128, -92, 82, -55, -18, 0,-122, 1, -10,-122,-131,-121, -75, -19,-113, -17, 6, 84; /I: E1=0; IE=-255; DE=-255;» more |
Numerical results [info]
| Total number of hits | 10 in 8 different sequences |
| Number of true positive hits | 10 in 8 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 2 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | Stress-response A/B barrel |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
8 sequences
DABB1_ARATH (Q9SYD8), FUSA4_GIBZE (I1RVD6), OLIAC_CANSA (I6WU39), POP3_ARATH (Q9LUV2), STBP1_POPEU (P84986), UP3_ARATH (Q9SIP1), Y4036_STRCO (P37977), Y5258_ARATH (Q9FK81)» more
|
| PDB [Detailed view] |
16 PDB
1Q4R; 1Q53; 1RJJ; 2Q3P; 5B08; 5B09; 5B0A; 5B0B; 5B0C; 5B0D; 5B0E; 5B0F; 5B0G; 7W6D; 7W6E; 7W6F » more |