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PROSITE entry PS51624


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PURL: https://purl.expasy.org/prosite/signature/PS51624

Direct ScanProsite submission
General information about the entry

Entry name [info] SAM_MT_TRMH_2
Accession [info] PS51624
Entry type [info] MATRIX
Date [info] 01-NOV-2011 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51604
Associated ProRule [info] PRU00956

Name and characterization of the entry

Description [info] RNA methyltransferase TRMH family profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=1600;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=1595;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=13.6444197; R2=0.0132369; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=4784442.0000000; R2=0.0000000; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=29188; H_SCORE=4784442; N_SCORE=400.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=-539; H_SCORE=4784442; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-10; D=-20; I=-20; B0=-1000; B1=-1000; E0=-1000; E1=-1000; MI=-105; MD=-105; IM=-105; DM=-105;
...
ยป more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 2 in 2 different sequences
Number of true positive hits 2 in 2 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] window20
Author [info] B_Cuche
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
2 sequences

TARB1_HUMAN (Q13395), TARB1_MOUSE (E9Q368)

			
		
PDB
[Detailed view]
1 PDB

2HA8