PROSITE entry PS51652
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General information about the entry
| Entry name [info] | AV_ZBD |
| Accession [info] | PS51652 |
| Entry type [info] | MATRIX |
| Date [info] |
01-AUG-2012 CREATED;
10-MAY-2017 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51652 |
| Associated ProRule [info] | PRU00985 |
Name and characterization of the entry
| Description [info] | Arteriviridae zinc-binding (AV ZBD) domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=67; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=62; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2115955; R2=0.0074997; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=8898.2285156; R2=4.7628765; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=972; H_SCORE=13528; N_SCORE=9.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=572; H_SCORE=11623; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-15; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='G'; M= -56, -80, -67, -68, -87, 71, -72, -90, 43, -89, -80, -55, -73, -62, -64, 68, -60, -83, -84, -79; /I: I=-28; MD=-71; /M: SY='K'; M= -90,-104, -82, -68,-106, -97, -85,-106, 93,-105, -93, -75, -90, -67, -51, -84, -84,-102, -99, -93; D=-28; /I: I=-28; MD=-71; /M: SY='K'; M= -89,-105, -73, 48,-107, -99, -84,-108, 76,-105, -95, -78, -87, -65, -58, -84, -85,-102,-102, -95; D=-28; /I: I=-28; MI=-71; IM=-71; DM=-71; /M: SY='C'; M= 58, 85, -85, -80, 64, -75, -82, -57, -79, -61, -63, -77, -85, -81, -82, -64, -65, 40, -77, -59; /I: I=-30; MD=-77; /M: SY='R'; M= -91,-111, -87, -72,-107,-101, -78,-107, -55,-101, -89, -81, -99, 67, 83, -84, -92,-104,-102, -89; D=-30; /I: I=-30; MI=-77; IM=-77; DM=-77; /M: SY='H'; M= -8, -21, -21, -19, -12, -30, 53, 13, -19, -1, 0, -13, -25, -18, -20, -9, 20, 41, -44, -7; /M: SY='C'; M= -14, 128, -33, -34, -24, -29, -33, -31, -29, -21, -22, -20, -44, -37, -36, -16, -14, -18, -54, -35; /M: SY='T'; M= 19, -17, -13, -15, -26, 31, -19, -21, -13, -24, -18, -2, -16, -12, -20, 25, 36, -13, -33, -22; /M: SY='I'; M= -13, -26, -29, -27, -6, -36, 44, 45, -25, 8, 7, -20, -27, -21, -25, -20, -9, 38, -36, -6; /M: SY='C'; M= -14, 128, -33, -34, -24, -29, -33, -31, -29, -21, -22, -20, -44, -37, -36, -16, -14, -18, -54, -35; /M: SY='C'; M= -8, 64, 33, -13, -34, 55, -20, -39, -19, -34, -28, -1, -24, -19, -27, -6, -16, -32, -37, -29; /M: SY='A'; M= 53, -14, -17, -12, -28, -1, -19, -19, -14, -21, -15, -10, -18, -9, -18, 25, 0, -7, -29, -23; /M: SY='P'; M= 28, -22, -14, -6, -29, -13, -19, -21, 22, -24, -16, -9, 40, -8, -5, 1, 22, -13, -30, -23; /M: SY='P'; M= 35, -23, -17, -10, -31, -7, -20, -22, -14, -27, -18, -14, 61, -12, -21, 19, -3, -15, -31, -27; /M: SY='D'; M= -11, -24, 32, -6, -20, -26, -17, 2, -4, -11, -10, -6, -23, -11, 24, -8, 20, 26, -41, -17; /M: SY='Y'; M= 27, -19, -21, -18, 1, -17, -11, -6, -17, 12, -2, -16, -24, -15, -19, -2, 20, -3, -11, 39; /M: SY='K'; M= 19, -20, -15, -7, -22, -18, -20, -6, 32, -15, -10, -8, -18, -6, 1, -1, 22, 14, -31, -18; /M: SY='S'; M= 7, -16, -8, -9, -27, -2, -11, -26, -9, -30, -23, 3, -16, -1, -14, 61, 12, -19, -35, -19; /M: SY='A'; M= 43, -16, -20, -15, -18, -7, -19, -10, -17, 10, -6, -14, -21, -11, -20, 20, -3, -4, -28, -18; /M: SY='C'; M= -14, 128, -33, -34, -24, -29, -33, -31, -29, -21, -22, -20, -44, -37, -36, -16, -14, -18, -54, -35; /M: SY='G'; M= -1, -29, -17, -28, -35, 77, -23, -43, -22, -39, -28, -3, -21, -20, -30, -2, -21, -37, -26, -30; /M: SY='M'; M= -11, -24, -28, -28, -6, 38, -18, 1, -25, 32, 39, -19, -27, -19, -26, -16, -17, -4, -25, -12; /M: SY='W'; M= 11, -31, 33, -8, -14, -13, -18, -27, -13, -28, -25, 26, -25, -12, -19, -9, -14, -28, 110, -2; /M: SY='F'; M= -22, -22, -38, -31, 53, -37, -21, 10, -31, 45, 13, -34, -37, -29, -28, -29, -17, 3, -10, 10; /M: SY='C'; M= -14, 128, -33, -34, -24, -29, -33, -31, -29, -21, -22, -20, -44, -37, -36, -16, -14, -18, -54, -35; /M: SY='D'; M= -12, -29, 49, -5, -22, 40, -15, -19, -17, 9, -13, -1, -23, -15, -23, -10, -15, -21, -35, -20; /M: SY='F'; M= -22, -24, -11, -23, 59, -20, -3, -11, -15, -7, -9, 42, -33, -18, -18, -12, -11, -15, -2, 42; /M: SY='C'; M= -17, 105, -19, -19, -22, -27, 75, -34, -20, -21, -14, -7, -33, -17, -19, -14, -16, -26, -55, -9; /M: SY='V'; M= 21, -19, -21, -20, -20, 24, -24, 2, -19, -12, -10, -12, -23, -16, -23, 22, -2, 27, -33, -20; /I: I=-28; MD=-71; /M: SY='P'; M= -45, -65, -38, -32, -56, -46, 45, -55, -38, -55, -41, -37, 58, -36, -43, -39, -39, -58, -64, -37; D=-28; /I: I=-28; MI=-71; MD=-71; IM=-71; DM=-71; /M: SY='Y'; M= -47, -60, -45, -41, -9, -55, -19, -42, -22, -37, -31, -43, -57, -29, 18, -41, -43, -44, -16, 48; D=-28; /I: I=-28; DM=-71; /M: SY='H'; M= -22, -33, -6, -6, -20, -23, 109, -39, -10, -21, -6, 5, -22, 0, -4, -11, -20, -38, -56, 11; /I: I=-30; MI=0; MD=-77; IM=0; DM=-77; /M: SY='G'; M= -11, -29, -23, -30, 38, 54, -13, -22, -23, -16, -15, -12, -27, -23, -26, -10, -20, -23, -4, 38; /M: SY='H'; M= -22, -33, -6, -6, -20, -23, 109, -39, -10, -21, -6, 5, -22, 0, -4, -11, -20, -38, -56, 11; /I: I=-28; MI=0; MD=-71; IM=0; DM=-71; /M: SY='P'; M= -29, -56, -33, -22, -58, 17, -32, -51, -26, -51, -38, -27, 35, 28, -30, -24, -35, -52, -46, -44; D=-28; /I: I=-28; DM=-71; /M: SY='C'; M= -17, 105, -19, -19, -22, -27, 75, -34, -20, -21, -14, -7, -33, -17, -19, -14, -16, -26, -55, -9; /M: SY='C'; M= -18, 94, -16, -16, -22, -26, 86, -35, -18, -21, -12, -4, -31, -12, -15, -13, -17, -28, -55, -3; /M: SY='P'; M= -10, -26, -18, -13, -23, -23, -24, -4, -15, -16, -12, -15, 68, -19, -24, -4, 35, 14, -37, -24; /M: SY='V'; M= -7, -17, -25, -23, -7, -30, -27, 15, -21, 19, 4, -17, -24, -22, -24, -6, 35, 37, -37, -14; /M: SY='S'; M= 2, -16, -13, -13, -20, -11, -17, -6, -12, -16, -14, -2, -17, -8, -17, 44, 32, 14, -37, -18; /M: SY='L'; M= -13, -20, -29, -24, 2, -28, -19, 10, -25, 49, 13, -25, -32, -17, -24, 10, -8, 4, -26, -8; /I: I=-26; MD=-65; /M: SY='F'; M= -38, -40, -46, -39, 63, -43, -33, -18, -39, -12, -19, -40, 34, -47, -40, -36, -30, -24, -12, 7; D=-26; /I: I=-26; MI=0; MD=-65; IM=0; DM=-65; /M: SY='N'; M= -27, -40, -17, -31, -50, -24, -23, -50, -26, -56, -45, 41, -44, -24, -33, 14, -16, -48, -65, -44; D=-26; /I: I=-26; DM=-65; /M: SY='C'; M= -14, 128, -33, -34, -24, -29, -33, -31, -29, -21, -22, -20, -44, -37, -36, -16, -14, -18, -54, -35; /M: SY='G'; M= -4, -29, -15, -19, -34, 68, -20, -41, 16, -37, -26, -2, -19, -12, -12, -3, -18, -34, -26, -27; /M: SY='H'; M= -22, -33, -6, -6, -20, -23, 109, -39, -10, -21, -6, 5, -22, 0, -4, -11, -20, -38, -56, 11; /M: SY='H'; M= 12, -26, 46, 0, -24, -18, 55, -11, -13, -17, -13, 0, -22, -9, -16, -7, -9, 10, -46, -11; /M: SY='I'; M= 18, -23, -33, -28, -7, -28, -34, 49, -26, 8, 6, -25, -25, -24, -30, -14, -8, 32, -29, -13; /I: I=-28; MI=0; MD=-71; IM=0; DM=-71; /M: SY='G'; M= -7, -31, -16, -18, -33, 60, -16, -40, 0, -34, -23, -5, -23, -8, 40, -6, -20, -34, -27, -24; /M: SY='S'; M= 7, -16, -8, -9, -27, -2, -11, -26, -9, -30, -23, 3, -16, -1, -14, 61, 12, -19, -35, -19; /M: SY='T'; M= -8, -21, -5, -9, -27, 23, -12, -24, 24, -27, -18, 32, -17, -6, -3, 3, 35, -19, -35, -21; /M: SY='Y'; M= -12, -26, -9, 23, 4, -29, -5, -3, -10, -9, -7, -15, -21, -7, -15, -8, 20, 13, -7, 52; /M: SY='C'; M= -14, 128, -33, -34, -24, -29, -33, -31, -29, -21, -22, -20, -44, -37, -36, -16, -14, -18, -54, -35; /M: SY='T'; M= -6, -21, 30, -1, -27, -15, -13, -23, 20, -25, -20, 4, -15, -4, -4, 26, 37, -16, -38, -19; /M: SY='M'; M= -10, -26, -23, -13, -15, 20, -7, -2, -11, 4, 67, -12, -21, 34, -11, -12, -14, -7, -26, -9; /M: SY='C'; M= -14, 128, -33, -34, -24, -29, -33, -31, -29, -21, -22, -20, -44, -37, -36, -16, -14, -18, -54, -35; /M: SY='E'; M= -4, -27, 3, 40, -33, -14, -6, -30, 1, -28, -20, -2, -13, 40, -4, 34, -1, -25, -31, -20; /I: I=-30; MI=0; MD=-77; IM=0; DM=-77; /M: SY='S'; M= 3, -19, -13, -14, -20, -8, -16, 13, -13, -16, -13, -1, -18, -5, -17, 53, 8, -4, -33, -16; /M: SY='P'; M= -19, -44, -19, -8, -38, -21, -22, -26, -15, -37, -23, -26, 101, -19, -28, -16, -11, -31, -32, -36; /M: SY='V'; M= -10, -24, -24, -14, -12, -32, -26, 29, 30, 0, 0, -17, -24, -12, -3, -16, -7, 37, -31, -14; /M: SY='Q'; M= -11, -28, -19, -8, -18, 27, -10, -8, -9, 14, 35, -11, -23, 45, -10, -10, -16, -12, -25, -12; /M: SY='M'; M= 20, -20, -19, -11, -18, -13, -11, -7, 18, -4, 50, -10, -19, -4, -5, 16, -4, -7, -28, -13; /M: SY='V'; M= -9, -24, 26, -15, -14, 26, -23, 6, -22, 13, -3, -12, -27, -20, -26, -13, -10, 27, -35, -17; /M: SY='P'; M= -18, -35, -10, -6, -32, -20, -8, -31, 9, -32, -20, 25, 60, -2, 49, -11, -11, -30, -33, -23; /M: SY='T'; M= -5, -19, -8, -4, -25, -16, -14, -21, 34, -24, -17, 1, -14, -2, 3, 26, 40, -14, -33, -18; /M: SY='P'; M= -11, -29, -11, 21, -23, -28, -20, 1, 19, -13, -10, -17, 47, -7, -7, -14, -8, 25, -33, -22; /M: SY='P'; M= -21, -29, -30, -21, 34, -31, -21, 1, -25, 31, 4, -31, 60, -25, -28, -24, -15, -6, -17, -3; /I: E1=0; IE=-255; DE=-255;» more |
Numerical results [info]
| Total number of hits | 9 in 9 different sequences |
| Number of true positive hits | 9 in 9 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | AV ZBD |
| Version [info] | 4 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
9 sequences
RPOA_EAVBU (P19811), RPOA_LDVC (Q06502), RPOA_LDVP (Q83017), RPOA_PRRS1 (Q9YN02), RPOA_PRRSB (Q8B912), RPOA_PRRSL (Q04561), RPOA_PRRSR (Q9WJB2), RPOA_PRRSS (A0MD28), RPOA_SHFV (Q68772)» more
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| PDB [Detailed view] |
2 PDB
4N0N; 4N0O |