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Entry: PS51724

General information about the entry

Entry name [info] SPOR
Accession [info] PS51724
Entry type [info] MATRIX
Date [info] 01-JUL-2014 CREATED;
10-MAY-2017 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC51724
Associated ProRule [info] PRU01061

Name and characterization of the entry

Description [info] SPOR domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=79;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=79;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.3083010; R2=0.0081236; TEXT='-LogE';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=9404.0644531; R2=5.0967741; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=947; H_SCORE=14231; N_SCORE=10.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=516; H_SCORE=12034; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-19; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
                A   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y
/I:         B1=0; BI=-380; BD=-380;
/M: SY='A';  M= 36,-71, -6,  1,-49,  3,-36,-29, 13,-36,-39,  0, 25,  7,-19, 20, 14, -6,-79,-49;
/M: SY='A';  M= 30,-63,-12,  3,-49, -5,-49,-19, 11,-25,-28, -1, 27, 17,-13, 13,  3,  7,-59,-25;
/M: SY='P';  M= 28,-72,  8,  9,-61, -1,-39,-32, -2,-29,-38,  8, 40,  1,-19, 21, 14,-16,-53,-29;
/M: SY='P';  M= 14,-73,  4,  8,-45, 16,-33,-50, 10,-29,-32,  4, 33, 22, -7, 24,  7,-25,-53,-43;
/M: SY='G';  M=  4,-74,  6, -5,-33, 47,-28,-44, 22,-60,-40,  5, 16, -7, -7, 16,  1,-32,-66,-24;
/M: SY='G';  M=  0,-75,  0,-16,-26, 31, 16,-36, 12,-32,-41, 13, 16,  1, 24, -3,  1,-25,-74, 15;
/M: SY='Y';  M=-56,-80,-75,-74, 58,-68, -9,-17,-48,-22,-17,-56,-50,-54,-20,-48,-44,-16, 97, 98;
/M: SY='Y';  M= -2,-28,-66,-52, 23,-17,  4, -8,-21,-10, 15,-31,-73,-14, -2, -3, 31, 16, 45, 54;
/M: SY='V';  M=-50,-70,-84,-78,-29,-86,-79, 55,-76, 35, -5,-79,-73,-68,-71,-71,-56, 72,-65,-24;
/M: SY='Q';  M=-52,-72,-47,-29,-63,-69,-26,-24,-29,-48,-12,-24,-63,121,-23,-34,-43,-26,-55,-26;
/M: SY='V';  M= 17,  5,-80,-70,-21,-77,-76, 35,-73, 37, -5,-74,-73,-64,-75,-45, -7, 60,-77,-40;
/M: SY='G';  M= 34,-72,-61,-60,-45, 82,-53,-53,-56,-30,-21,-48,-42,-58,-58,  1,-45,-35,-74,-48;
/M: SY='A';  M= 70,-64,-36,-38,-33,-21,-65,-46,-47,-47,-62,-42,-38,-53,-59, 60, -9,-18,-77,-50;
/M: SY='F';  M=-30,-71,-72,-71,100,-47,-39,-18,-65,  0,-26,-58,-74,-44,-60, -5,-30,-13,-12, 40;
/M: SY='S';  M=  6,-72,-15,-32,-61,  5, -9,-53, 26,-53,-44,-13, -5,  8, 44, 51,  9,-45,-78,-48;
/M: SY='S';  M=-21,-71, 47,  3,-75,-37, -4,-59, -2,-54,-58, 50,-66,  9, -7, 51, 19,-24,-85,-42;
/M: SY='E';  M= 14,-77,-41, 47,-27,-64,-27,-43, 33,-22,-23,-28, 21, 32, 38,-25,-39,-32,-33, -6;
/M: SY='E';  M= 30,-73, 42, 47,-78,-16,-33,-50,  6,-52,-63,  0,-22, 13,-16, 21,  4,-49,-44,-69;
/M: SY='N';  M= -1,-72, 27, 13,-71, -4,-19,-52, 14,-56,-67, 75,-42, 24,  4,  7,-18,-53,-58,-37;
/M: SY='A';  M= 91,-62,-57,-55,-66,-44,-70,-34,-51,-27,-48,-57,-63,-61,-68,-34,-31,  2,-76,-69;
/M: SY='E';  M=-20,-77, 34, 52,-64,-55,-13,-37, 24,-19,-22, 23,-61, 49, 20,-22,-30,-41,-66,-33;
/M: SY='R';  M= 27,-72,-11,  9,-66,-17,-23,-44, 29,-45,-50, 21,-54, 23, 43, 15, 11,-45,-45,-48;
/M: SY='L';  M= -4,-71,-74, -8, 27,-60,-40, -1,-38, 52, 31,-56,-77, -3,-18,-44,-24, 11,  9, 18;
/M: SY='W';  M= 28,-48,-65,-44,-48,-48,-42,  6, 26,  8,  5,-52,-72, 34, 30,-35,-32, 19, 56,-12;
/M: SY='A';  M= 41,-62, 29, 19,-58,-15,-22,-56, 19,-58,-47, 18,-57, 39, 13, 11,-18,-45,-64,-55;
/M: SY='R';  M=-29,-77, -1, 22,-64,-44,-27,-47, 50,-54,-29, -1,-59, 46, 57,  3, -9,-38,-65,-43;
/M: SY='L';  M=-17,-70,-80,-66, -8,-77,-10, 18,-63, 74,  4,-41,-80,-28,-65,-63,-41, -3,-32,  3;
/M: SY='R';  M= 27,-64,-24, 10,-57,-13,-15,-23, 36,-31,-35, -9,-40, 37, 39, 12,-13,-38,-76,-51;
/M: SY='K';  M= 18,-73,  4,  3,-22, -3,-16,-35, 31, -1, -3, -2,-40, 29, 22, 12,-11,-36,-76,-50;
/M: SY='Q';  M= 12,-64,-11,  9,-58,-44, -6,-28, 43,  2, -5,  0,-64, 47, 21,  5,-19,-37,-66,-22;
/I:         I=-24; MD=-60;
/M: SY='G';  M=-24,-82,-34,-54,  8, 60,-13,-47,-33,-14,-33,-11,-47,-23,-46,-37,-11,-39,-47, 22; D=-24;
/I:         I=-24; MD=-60;
/M: SY='Y';  M=-35,-94,-22,-50,  9,-19,-23, -6,-39,-13,-28,-45, 27,-12,-56,-33,-57,-26,-48, 29; D=-24;
/I:         I=-24; MI=0; MD=-60; IM=0; DM=-60;
/M: SY='P';  M= -4,-68,-33,-43,-46,-48,-40,-57,-26,-35,-56,-44,  4,-51,-27,-16,-24,-21,-32,-22; D=-24;
/I:         I=-24; DM=-60;
/M: SY='G';  M=  9,-50, -1,-19,-21, 48, -7,-22,-26,-30,-30,  9,-10, -5,-13,  7,-16, 12,  2, -5;
/M: SY='Y';  M=  4,-57,-38,-28, 29,-52, -8, 28,-27, -2, -7,-44,-23, -5,-16, -6,  0, 29,-11, 47;
/M: SY='P';  M=-21,-59,  8,  8,-28,-27,-25,  0, 13,-43,-20,  4, 31, 18, 13,  3, 26, -8,-41, 23;
/M: SY='A';  M= 30,-52,-52,  7,-18,-23,-32,  2,  0,-17, -9,-40, -5,  4,-19, 25, 17, 22,-25,-19;
/M: SY='Q';  M=-12,-56, -6,  6,  1,-38, -7,-31, 17,-37,-32,-22,  5, 34, 29, 13, 23,  2,-34, 14;
/M: SY='V';  M=-11,-71,-40, -5,-16,-53,-40, 37,  0, -2,  2,-36,-29, -5,-23, -6, 17, 45,-48, 10;
/M: SY='E';  M=  3,-59,-16, 26,-26,-21, 11,  3,-16,-12,-36,  1,-21, 23, 10,  1, 13, 24,-67,-15;
/M: SY='P';  M=-15,-61, 10, -1,-28,-23,-15,-40, 19,-40,-49, 30, 30, 28, 15, 17, 19,-12,-36,-12;
/M: SY='N';  M= -3,-64, -7, -3,-40, 35,-39,-11, 22,-41,-42, 36,-31,-14, -1, 12, -4, 11,-66,-30;
/M: SY='G';  M=-14,-75, 39, -8,-80, 52,-29,-73,  6,-72,-49, 32,-39, 31, 14, -6, -2,-55,-81,-61;
/M: SY='G';  M=-20,-65, 24, -5,-76, 40, -8,-41,  4,-46,-38, 21, 23, 18,  3,  0, 17,-22,-81,-44;
/M: SY='W';  M=-14,-65,-34,-18, -8,  5,-42,-11,  9, 10, -5, -8,-30,-22,-13,-24, 28, -4, 94,  5;
/I:         I=-28; MI=0; MD=-70; IM=0; DM=-70;
/M: SY='Y';  M=-60,-78,-41,-64, 32,-68, 54,-26,-52,-43,-42,  0,-78,-45,-45,-49, 12,-19, 46,105;
/M: SY='R';  M=-29,-61,-55,-40,-53,-65,-22,-32, 28,-36,-39,-36,-48,-19, 93,-47,-11,  0,-48,-18;
/M: SY='V';  M=-26,-68,-74,-76,-49,-84,-80, 22,-74, 24,-31,-78,-79,-70,-36,-68,-41, 86,-82,-36;
/M: SY='R';  M=-34,-50,-69,-56,  4,-73,-15, -3,-16,  9,-10,-59,-75, 47, 66,-20,-12,  7, 12, 22;
/M: SY='V';  M= 16,-29,-77,-69, -2,-68,-63, 27,-66, 22,  6,-60,-76,-43,-42, -3,-23, 58,-57, 20;
/M: SY='G';  M=-18,-47,-46,-59,-63, 93,-58,-66,-36,-77,-53,-39,-31,-20,-55,-24,-36,-54,-59,-54;
/M: SY='P';  M=-19,-63, -8,-23,-60, 11,-39,-49,-29,-54,-50,-15, 97,-40, -7,  4,-12,-33,-79,-29;
/M: SY='F';  M=-42,-42,-45,-31, 89,-51,-38, -3,-51, -4,-22,-54,-67,-64,-66,-45,-45,-19, -5, 76;
/M: SY='A';  M= 34,-71, 16, -2,-52, -7,-21,-39, 11,-38,-27, 12, 21,-15,-16, 24, 10,-10,-80,-31;
/M: SY='S';  M=-27,-70, 45,-15,-68, -7,-42,-68,-21,-76,-70, 35,-31,  1,-31, 64, 40,-58,-86,-51;
/M: SY='R';  M= -7,-78,-10, 20,-48,-42,-24,-24, 43, -9,-23,-43,-17, 19, 60,-23,-43,-31,-33, -1;
/M: SY='E';  M= 34,-73, 39, 43,-69,-15,-40,-59,  2,-56,-60, -2,-42, 27, -8, 21, -7,-43,-50,-65;
/M: SY='E';  M= 26,-75, 33, 59,-62,-47,-26,-52,  8,-35,-39,-19,-56, 39, -2, -4,-15,-38,-80,-47;
/M: SY='A';  M= 87,-56,-62,-56,-66,-40,-61,-41,-55,-15,  0,-60,-49,-54,-47,-18,-21,-14,-76,-54;
/M: SY='Q';  M= -4,-76, 26, 41,-46,-27,-30,-44, 19,-33,-35, 22,-67, 45, 25, -9,-16,-20,-21,-24;
/M: SY='Q';  M= 27,-74, 18, 15,-47,-35,-32,-51, 30,-41,-48,  2,-46, 47, 29,  7, -1,-47,-63,-35;
/M: SY='A';  M= 48,-59,-30,-34, 14,-54,-41,  4,-26, 23, 10,-46,-73, -9,-32,-30, -1, 17,-12, -2;
/M: SY='C';  M= 22, 54,-62,-31,-49,-27,-36, -3, 16, 25, -1,-39,-74, 25, 29,-19,-37, -5,-77,-39;
/M: SY='Q';  M= 26,-73, 19, 23,-67,-14, -4,-52, 17,-42,-37, 26,-38, 32, 12, 15,  2,-40,-49,-56;
/M: SY='Q';  M=  8,-56, -6, 13,-57,-46,-37,-43, 42,-29,-31,  1,-60, 46, 45,  7,  8,-51,-52,-62;
/M: SY='L';  M=-26,-64,-77,-64,  4,-67,-48, 33,-62, 68,  8,-42,-80,-60,-52,-60,-38, 18,-58,-30;
/M: SY='K';  M=  4,-77,-17, -6,-67,-28,-10,-41, 55,-39,-34,-10, 24, 38, 39, -8,-27,-31,-77,-47;
/I:         I=-26; MD=-67;
/M: SY='K';  M= 20,-81,-16, -3,-57,-17,-39,-53, 36,-43,-47, -6,-32, 34,  8,  0,-15,-50,-85,-52; D=-26;
/I:         I=-26; MI=0; MD=-67; IM=0; DM=-67;
/M: SY='N';  M=  3,-51, 34, 25,-11,-20,-21,-29,  8,-18,-14, 34,-19,  3,-11, 12, -6,-18,-45,-21;
/M: SY='A';  M= 37, 18,-35,-19,-25,  8,-22, -1,-27, 11,-24,-16,-12, -7,-34, 11,  8, -9,-51,-25;
/M: SY='G';  M=-26,-36,-13,-19, -6, 56,-36,  8, -9,-30,-21, 15,-49, 24, -6,-25,-32, -1,-33, -2;
/M: SY='F';  M=  8,-53,-27,-35, 33,-36, -9, 12,-19, 26,-15,-11, -6, -4,-31,-30,-18, 14,-53, 29;
/M: SY='Q';  M=-12,-17, 25, 12,-21,-22,-40,-19, 22,-31,-32,  2,-19, 33,-12, 19, 17, -1,-24,-40;
/M: SY='P';  M= 17, 14,-12,-35,-45, 25,-44,-32, -1,-44,-45, -2, 27, -7, 10, 22,  5,-12,-61,-33;
/M: SY='W';  M=  4,-15,-45,-23, 35,-45,-37,  4,-29, -6,  2,-38, 38,-14,-18, -4,-30,  7, 44, -7;
/M: SY='W';  M=-38,-83,-66,-67, -1,-45,-60, 33,-31, -1,-28,-62,  8,-26,-15,-58,-22, 36, 77, -1;
/M: SY='V';  M=-23,-81,-45,-33,-45,-36,-36, 22, 12, -4, -6,-56,-20,-16, -1,-44, -7, 36,-56,-25;
/M: SY='R';  M=-16,-86,-40, -5,-14,-45,-40,-29, 24,-25,-22,-32,-39, 17, 26,-17, -6,-11,-60,-17;
/M: SY='Y';  M=-12,-63,-29, -5,-22,-60,-14,-32,-13,-52,-52,-31,  5,-10,  8, -9, 10,-26,-23, 11;
/I:         E1=0; IE=-380; DE=-380;
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 32 in 30 different sequences
Number of true positive hits 32 in 30 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 3
Feature key [info] DOMAIN
Feature description [info] SPOR
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
30 sequences

CWLC_BACSU  (Q06320    ), CWLM_BACLI  (P37134    ), DAMX_ECO57  (Q8X826    ), 
DAMX_ECOLI  (P11557    ), DAMX_SERMA  (P45459    ), DEDD_ECOLI  (P09549    ), 
FTSN_CAUVN  (B8GX61    ), FTSN_ECOLI  (P29131    ), LYTD_BACSU  (P39848    ), 
RLPA_CAMJE  (Q9PHM1    ), RLPA_ECO57  (Q8XBQ1    ), RLPA_ECOLI  (P10100    ), 
RLPA_HAEIN  (Q57092    ), RLPA_HELPJ  (Q9ZJ38    ), RLPA_HELPY  (O26091    ), 
RLPA_NEIMA  (Q9JSM7    ), RLPA_NEIMB  (Q9K1A0    ), RLPA_PASMU  (Q9CJR6    ), 
RLPA_PSEAB  (A0A0H2ZFV1), RLPA_PSEAE  (Q9X6V6    ), RLPA_SALTI  (Q8Z8I0    ), 
RLPA_SALTY  (Q8ZR01    ), RLPA_VIBCH  (Q9KTF4    ), RLPA_YERPE  (Q8ZDG6    ), 
SP2B_BACSU  (P37575    ), Y066_RICPR  (Q9ZE80    ), Y096_RICCN  (Q92JH1    ), 
Y1894_AQUAE (O67734    ), Y752_TREPA  (O83733    ), Y896_HAEIN  (Q57434    )
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PDB
[Detailed view]
7 PDB

1UTA; 1X60; 2LFV; 6I05; 6I09; 6I0A; 6I0N

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