PROSITE entry PS51736
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General information about the entry
| Entry name [info] | RECOMBINASES_3 |
| Accession [info] | PS51736 |
| Entry type [info] | MATRIX |
| Date [info] |
01-OCT-2014 CREATED;
01-OCT-2014 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00334 |
| Associated ProRule [info] | PRU01072 |
Name and characterization of the entry
| Description [info] | Resolvase/invertase-type recombinase catalytic domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=138; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=133; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.0733249; R2=0.0082716; TEXT='-LogE'; /CUT_OFF: LEVEL=0; SCORE=657; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=415; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-37; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-380; BD=-380; /M: SY='M'; M= -21, -79, -8, -61, -71, -75, -5, -60, 32, -18, 81, 27, -77, -11, 47, -65, -64, -7, -84, -65; /M: SY='I'; M= 28, -75, -78, -72, -64, -25, -77, 47, -3, 13, -52, -70, -77, -68, 2, -7, 3, 7, -82, -68; /M: SY='I'; M= -6, -80, -87, -83, 48, -14, -81, 71, -75, -4, -48, -77, -82, -77, 1, -73, -66, -9, -71, -54; /M: SY='G'; M= 3, 51, -77, -82, -74, 69, -81, 29, -77, -27, -63, -65, -78, -76, -83, -61, -68, 1, -83, -76; /M: SY='Y'; M= -76, 19, -76, -79, -26, -83, -44, -63, -71, -59, -56, -77, -89, -67, -69, -72, -71, -67, -34, 127; /M: SY='A'; M= 56, 49, -82, -75, -66, -72, -80, 3, -75, 2, 15, -76, -80, -73, -78, -61, -60, 45, -86, -70; /M: SY='R'; M= -73, -89, -69, -57, -81, -83, -58, -88, -29, -81, -70, -62, -81, -45, 111, -67, -71, -82, -81, -68; /M: SY='V'; M= -30, -74, -84, -76, -6, -86, -83, -12, -29, -19, -50, -78, -82, 0, -14, -69, -23, 83, -87, -64; /M: SY='S'; M= -47, -70, -62, -63, -26, -55, -65, -79, -63, -81, -76, -50, -70, -55, -67, 102, -42, -71, -86, -69; /M: SY='T'; M= -54, -69, -63, -65, -11, -67, -69, -69, -61, -73, -69, -53, -68, -62, -13, 61, 85, -62, -88, -68; /M: SY='N'; M= -22, -78, 1, 40, -12, -28, 3, -38, -15, 4, -65, 49, -4, 1, -64, -2, -1, -70, -85, -68; /M: SY='D'; M= -25, -83, 70, 40, -84, -9, -61, -82, 6, -21, -74, 9, -71, 17, -8, -23, -63, -79, -90, -74; /M: SY='Q'; M= -65, -89, -59, -8, -92, -73, -53, -79, -46, -74, 12, -56, -72, 122, -47, -55, -67, -81, -78, -66; /I: I=-26; MI=0; MD=-67; IM=0; DM=-67; /M: SY='N'; M= -60, -74, 57, -55, -81, -62, -59, -79, -60, -53, -76, 68, -72, -58, -67, 52, 31, -75, -97, -74; /M: SY='L'; M= -70, -76, -79, -16, -54, -87, -75, 20, -77, 66, -42, -31, 13, -73, -79, -73, 16, -20, -80, -63; /M: SY='D'; M= -22, -78, 51, 50, -86, -67, -59, -83, -15, -83, -77, 45, -69, -1, -61, 31, 7, -78, -92, -75; /M: SY='R'; M= 5, -80, -68, -15, -73, -76, 2, -16, -45, 4, -61, 3, -78, -54, 81, -22, -10, -40, -83, -67; /M: SY='Q'; M= -65, -90, -60, -40, -95, -73, -53, -81, -7, -77, -63, -55, -72, 124, -45, -54, -67, -83, -78, -67; /M: SY='I'; M= -68, -82, -70, 26, -16, -87, -72, 51, 15, -11, -54, -71, -77, -60, 46, -71, -65, 23, -80, -65; /I: I=-45; MI=0; MD=-115; IM=0; DM=-115; /M: SY='E'; M= -12, -83, 38, 55, -80, -74, -59, -79, 12, -79, -72, 11, -71, 21, 29, -25, -63, -23, -83, 3; /M: SY='A'; M= 37, -77, -66, 27, 3, -4, -66, -20, -4, 12, 13, -17, -75, 10, -17, -61, -65, -61, -74, 1; /M: SY='M'; M= -69, 9, -89, -83, -51, -90, -76, 35, -81, 60, 60, -83, -85, -76, -80, -78, -29, 13, -80, -61; /I: I=-24; MD=-60; /M: SY='K'; M= -8, -80, -61, 18, -81, -27, -68, -26, 49, -77, -70, 27, -73, -56, 17, -59, 35, -13, -88, -75; D=-24; /I: I=-24; MD=-60; /M: SY='K'; M= 39, 0, 28, 11, -86, -67, -5, -83, 40, -83, -75, 10, -73, -57, -58, 14, -21, -75, -90, -76; D=-24; /I: I=-24; MD=-60; /M: SY='W'; M= 41, -84, -79, -74, -17, -75, -70, 2, 8, -71, -67, -8, -83, -69, -10, -65, -24, -66, 71, 59; D=-24; /I: I=-24; MI=0; MD=-60; IM=0; DM=-60; /M: SY='N'; M= -18,-105, -13, -6, -5, -97, -90, -99, -88, -37, -94, 22,-102, 10, -93, -27, -18, -98,-110, -93; D=-24; /I: I=-24; DM=-60; /M: SY='G'; M= -13,-103, -89, -92,-100, 57, -90,-108, -37,-105, -96, -34, -96, 10, -92, -76, -91,-103, -96, -2; D=-24; /I: I=-24; DM=-60; /M: SY='W'; M= -90,-104,-108,-102, -65,-105, -94, 31, -96, -45, 8,-102,-102, -94, -98, -94, -25, 1, 92, 43; D=-24; /I: I=-24; DM=-60; /M: SY='Y'; M= -67, -85, 35, 7, -67, 39, -61, -80, 21, -33, -70, -23, 23, -17, -8, -63, -68, -79, -70, 54; /M: SY='C'; M= 2, 70, 9, -69, -72, -76, -78, 27, -18, -61, 3, -69, 44, -72, -76, 3, -60, 32, -89, -74; /M: SY='E'; M= -10, -81, 20, 50, -76, -21, -9, -73, -56, -76, -70, 23, -5, 30, -10, -18, 1, -6, -82, 15; /M: SY='K'; M= -28, -83, -68, -60, -67, -35, 26, 15, 49, -18, -60, -4, -77, 20, 45, -65, -66, -33, -75, 27; /M: SY='I'; M= -45, -78, -78, 5, 7, -88, -81, 66, -26, 0, -48, -75, -78, -73, -77, -70, 18, 34, -80, -61; /M: SY='Y'; M= -75, -82, -81, -79, 62, -87, 31, 36, -20, -22, -52, -76, -85, -73, -28, -74, -69, -14, -52, 81; /M: SY='E'; M= -28, -79, -9, 44, -76, -76, 2, 28, -14, -66, -63, -60, -70, 28, 4, 9, 36, -17, -86, -69; /M: SY='E'; M= -69, -85, 70, 70, -84, -78, -61, 3, 14, -75, 10, -54, -67, -50, -59, -64, -64, -72, -91, -74; /M: SY='K'; M= -68, -84, 35, 28, -81, -25, 51, -78, 65, -32, -69, -54, -71, 13, -21, -63, -65, -23, -86, -68; /I: I=-33; MI=0; MD=-84; IM=0; DM=-84; /M: SY='A'; M= 30, -77, -77, -73, -15, 20, -77, 30, 6, -1, -59, -69, -78, -13, -71, 7, -63, -1, -81, -69; D=-33; /I: I=-33; DM=-84; /M: SY='S'; M= -47, -70, -61, -62, -80, -56, -64, -79, -61, -83, -76, -50, -69, -54, -22, 101, -16, -71, -88, -72; /M: SY='G'; M= 19, -80, -70, -79, -87, 91, -76, -91, -74, -88, -78, -57, -73, -71, -81, -53, -71, -83, -80, -82; /M: SY='A'; M= 35, -72, -63, 5, -7, -30, -65, 11, 32, -7, -10, 9, -71, -57, -59, 24, -5, -57, -74, 0; /I: I=-36; MI=0; MD=-90; IM=0; DM=-90; /M: SY='N'; M= -34, -77, 22, -14, -69, -69, 29, 7, 29, -20, -62, 39, -72, -34, 33, 17, 0, -64, -81, 5; /M: SY='M'; M= 5, -74, -9, 13, -71, 9, -64, -5, -6, -19, 58, -13, -25, 4, -30, 27, 12, -23, -81, -67; /M: SY='D'; M= -40, -81, 60, 33, -84, 6, 29, -85, 12, -82, -73, 42, -70, 18, 29, -56, -62, -82, -88, -70; /M: SY='R'; M= -33, -85, -66, -55, -79, -77, -56, -85, -28, -78, -67, -59, -78, -44, 111, -16, -66, -78, -79, -66; /M: SY='P'; M= -65, -87, 23, 14, -86, -22, -66, -81, 31, -85, -74, -61, 96, -57, -8, -4, -60, -81, -83, -78; /M: SY='G'; M= -3, -77, -60, 13, -81, 66, -66, -31, -61, -76, -68, -4, -70, 51, -66, -2, -9, -11, -80, -74; /M: SY='L'; M= -71, -73, -88, -81, 57, -88, -70, -38, -81, 75, -36, -84, -87, -77, -78, -79, -67, -15, -63, 6; /M: SY='K'; M= -40, -78, 30, 32, -11, -71, -59, -31, 41, 12, -4, 33, -71, 35, -26, -15, -60, -67, -80, -65; /M: SY='K'; M= -25, -79, -57, 30, -74, -75, 18, -72, 60, -2, -14, -13, -69, 4, 48, -59, 5, -70, -80, -66; /M: SY='M'; M= 3, 38, -85, -78, -2, -81, -71, 11, -77, 59, 73, -79, -82, -72, -76, -72, -63, -9, -75, -57; /M: SY='L'; M= -68, -75, -85, -78, -49, -89, -75, 53, -72, 63, -37, -81, -83, -71, 16, -76, -64, 15, -77, -59; /M: SY='D'; M= -14, -79, 56, 26, -81, -19, -58, -79, 34, -51, 14, 6, -69, 3, 35, 7, -59, -75, -85, -70; /M: SY='D'; M= -8, -77, 55, 24, 33, -74, 29, -65, -1, -8, 44, -56, -72, -57, 5, -61, 7, -65, -77, -16; /M: SY='L'; M= 26, -72, -81, -75, -56, -76, -76, 34, -75, 43, 2, -76, -3, -71, -77, -5, -58, 39, -80, -63; /M: SY='Q'; M= -9, -79, -55, 48, -77, -71, -1, 9, 2, -68, 10, -22, -68, 51, 37, 20, -8, -64, -81, -67; /M: SY='E'; M= 4, 0, -6, 59, -78, -69, 16, -70, 3, -69, 42, 29, 13, 16, -32, -19, -34, -20, -85, -69; /I: I=-31; MI=0; MD=-79; IM=0; DM=-79; /M: SY='G'; M= -19, -81, -20, -79, -74, 81, -76, 24, -75, -72, -67, -60, -75, -73, -81, -58, -69, -7, -77, 0; D=-31; /I: I=-31; DM=-79; /M: SY='D'; M= -64, -80, 84, 28, -83, -20, -58, -9, -3, -78, -74, 12, -68, 2, -8, 3, -10, -74, -92, -72; /M: SY='T'; M= 6, -72, -65, 14, -68, -74, -69, 5, -15, -57, 27, -61, -69, 14, 8, -26, 58, 37, -84, -67; /M: SY='V'; M= -62, -72, -85, -80, 5, -87, -81, 46, -78, 37, -41, -79, -81, -77, -79, -70, 8, 63, -79, -58; /M: SY='V'; M= -23, -73, -83, -79, -52, -86, 27, 47, -77, 34, -41, -78, -81, -74, -77, -71, -59, 63, -80, -5; /M: SY='V'; M= -8, 50, -84, -79, -59, -24, -84, 28, -77, -45, 18, -77, -80, -78, -79, -67, -56, 81, -88, -66; /M: SY='W'; M= 2, 32, -65, 27, -66, -75, 11, -72, 28, -29, -66, -64, -73, -1, -60, -59, 43, -40, 86, 15; /M: SY='K'; M= -33, -83, 36, 11, -69, -73, -58, -81, 60, -79, -72, -55, -72, -51, 29, 16, -62, -78, -72, 47; /M: SY='L'; M= -70, -79, -80, -20, -56, -87, -74, 32, 11, 57, 14, -79, 15, -68, -10, -76, -66, -12, -79, -64; /M: SY='D'; M= -69, -81, 100, -42, -88, -69, -60, -85, -60, -86, -83, 13, -71, -60, -69, -12, 34, -80,-105, -75; /M: SY='R'; M= -73, -89, -69, -57, -81, -83, -58, -88, -29, -81, -70, -62, -81, -45, 111, -67, -71, -82, -81, -68; /M: SY='L'; M= -72, -76, -90, -83, -47, -92, -76, 34, -84, 79, -35, -88, -88, -77, -82, -82, -68, -41, -77, -59; /M: SY='G'; M= 35, -74, -68, -71, -83, 63, -73, -82, -69, -82, -75, -56, -71, -65, -75, 48, 7, -73, -83, -78; /M: SY='R'; M= -72, -2, -70, -59, -80, -36, -59, -32, -32, -78, -69, -62, -81, -48, 107, -67, -71, -78, -82, -69; /I: I=-38; MI=0; MD=-97; IM=0; DM=-97; /M: SY='S'; M= -58, -76, 6, -61, -8, 19, -62, -82, 18, -84, -76, 54, 12, -58, -62, 60, -53, -78, -85, -71; /M: SY='M'; M= -17, -74, -78, -77, 37, -23, -69, -13, -74, 23, 59, -4, -80, -73, -75, -65, 36, 4, -71, 22; /M: SY='W'; M= 28, -77, -11, 14, -7, -21, -67, -70, 15, -70, 39, -15, -73, -7, -2, 27, -60, -25, 55, -64; /M: SY='D'; M= -71, -83, 74, 39, -78, -75, 64, -77, -60, 6, -68, 7, -72, -8, -65, -62, -14, -77, -96, -66; /M: SY='L'; M= 18, 20, -86, -78, -55, -82, -77, 29, -78, 53, 31, -81, -83, -9, -78, -72, -66, -4, 42, -61; /M: SY='I'; M= -67, -82, -68, 33, -16, -27, 40, 46, -17, -1, -53, -70, -76, -15, 15, -70, -65, 25, -82, -62; /M: SY='Q'; M= -40, 13, -28, 27, -77, -77, 1, -25, 12, -71, -66, -4, -74, 49, 40, -39, 2, 11, 38, -67; /M: SY='L'; M= -23, -76, -86, -80, -5, -88, -77, 46, -77, 60, -41, -80, -83, -75, -14, -73, 10, -24, -77, -60; /M: SY='V'; M= -65, -76, -22, -81, -5, -89, -81, 51, -80, 21, -45, -80, -83, -79, -81, -35, -38, 60, -79, 1; /M: SY='E'; M= -33, -83, 49, 57, -84, -47, -59, -83, 38, -32, -74, 29, -69, 2, -10, -32, -63, -79, -88, -74; /M: SY='E'; M= -3, -79, -1, 57, -73, -74, -62, -71, -8, 11, -64, -13, -71, 11, 6, 0, 13, -68, -82, -11; /I: I=-36; MD=-90; /M: SY='L'; M= -25, -82, -91, -87, 22, -92, -74, 36, -85, 53, -45, -88, -90, -80, -83, -81, -72, -48, -67, 48; D=-36; /I: I=-36; MD=-90; /M: SY='R'; M= -9, 31, 4, -12, -85, -26, -11, -84, 22, -34, -75, -10, -79, 0, 32, 11, 2, -79, -92, -77; D=-36; /I: I=-36; MI=-90; MD=-90; IM=-90; DM=-90; /M: SY='E'; M= 29, -80, 38, 41, -86, -70, -66, -81, -10, -32, -75, 26, -73, 0, -65, -1, -13, -75, -92, -78; D=-36; /I: I=-36; DM=-90; /M: SY='R'; M= -67, -85, -7, -13, -83, 5, 15, -84, 47, -48, -17, -58, -75, 6, 60, 0, -26, -80, -84, -71; D=-36; /I: I=-36; DM=-90; /M: SY='G'; M= -59, -83, -24, -26, -85, 77, -71, -25, 20, -84, -75, -56, -73, -1, 13, -28, -70, -81, -80, -78; /M: SY='I'; M= 27, -75, -83, -77, -62, -81, -83, 59, -71, -21, -50, -76, -79, -73, 8, -66, -9, 50, -84, -67; /M: SY='N'; M= -16, -78, -7, -11, -75, -70, 41, 3, 17, -28, -64, 46, -75, -9, 24, 19, -20, -12, -88, -67; /M: SY='F'; M= -70, -77, -91, -86, 58, -92, -83, 57, -83, 25, -44, -84, -85, -83, -83, -78, -65, 41, -70, -50; /M: SY='M'; M= -10, -77, -69, -17, -62, -77, 51, 34, 4, -53, 61, -6, -12, -57, 43, -64, -61, 18, -78, 1; /M: SY='T'; M= 11, 27, -8, -63, 25, -68, 13, -24, -17, -32, -60, -57, -72, -62, -1, 42, 44, 12, -80, -59; /I: I=-26; MD=-67; /M: SY='P'; M= -91,-101,-101, -94, -82,-105, -97, -11, -26, 32, -69, -99, 39, -94, -96, -92, 0, -47,-103, -89; D=-26; /I: I=-26; MI=0; MD=-67; IM=0; DM=-67; /M: SY='T'; M= 1, -73, -70, 5, 22, -41, -19, 25, 11, 19, -50, -67, -5, -65, -66, -61, 31, 23, -75, -58; /M: SY='W'; M= -12, -78, 38, 1, -58, -74, 12, -24, 9, -5, -58, -10, -74, -15, 2, -61, 2, 20, 64, 40; /M: SY='D'; M= -63, -79, 66, 16, -74, 15, -57, -26, -13, -14, -67, 30, -71, 28, -12, -3, -59, -39, -82, 2; /M: SY='N'; M= -20, -76, 11, -14, -11, 31, -63, -64, -61, -2, -62, 43, 35, 14, -22, -1, -16, 1, -81, -68; /M: SY='W'; M= -34, -78, -8, 19, -55, -78, -68, 53, -66, 2, 8, -67, -17, 11, -70, -2, 11, -8, 56, 29; /M: SY='D'; M= -5, -76, 74, 12, -74, 7, -61, -71, -60, -17, -68, -49, -69, -2, -66, 25, 11, -20, -85, -6; /M: SY='P'; M= -27, -76, 24, 18, -69, -40, -68, 16, -21, 11, -58, -60, 52, -61, -68, -2, 50, -56, -83, -69; /M: SY='D'; M= 18, -73, 55, 23, -76, -64, -61, -68, -56, -11, -66, -7, -68, 13, -11, 39, 16, -22, -86, -69; /M: SY='S'; M= -10, 32, -3, 26, -74, -6, -59, -76, -23, -77, -71, 45, -68, -53, -63, 59, 25, -70, -82, 4; /M: SY='P'; M= 7, 32, -24, 47, 10, -70, 12, -71, 3, -73, -68, -63, 74, -56, -63, -5, -31, -21, -79, -68; /M: SY='M'; M= 11, -74, -70, -22, -7, -72, -10, -13, -4, -15, 78, -3, 33, -62, -65, -19, 2, 14, -73, 24; /I: I=-29; MI=0; MD=-75; IM=0; DM=-75; /M: SY='G'; M= -2, -76, 30, -61, -75, 60, -63, -30, 14, -77, -6, 16, -70, -59, -14, 11, -12, -72, -78, 2; /M: SY='R'; M= -61, -79, 11, 12, -77, 9, -59, -2, 31, -70, 26, -4, -70, 41, 46, 20, -59, -68, -80, -67; /M: SY='M'; M= -36, -73, 18, -69, 48, -80, -67, 6, -19, 33, 74, -69, -78, -68, -13, -68, 1, -2, -71, -50; /M: SY='M'; M= -10, -73, -81, -75, 40, -81, -71, 48, -73, 25, 55, -73, -78, -2, -74, -36, 6, 14, -69, -5; /M: SY='F'; M= -68, 32, -78, -15, 61, -83, -68, 16, 15, 29, 51, -73, -79, -69, -66, -71, -22, -3, -64, 5; /M: SY='H'; M= -4, -76, 35, -13, -75, 1, 58, 0, -56, -68, -63, -51, -69, 46, 4, -14, 47, -23, -86, -64; /M: SY='V'; M= -62, -73, -87, -81, -4, -88, -79, 55, -78, 29, 47, -80, -80, -76, -79, -74, -59, 62, -78, -57; /M: SY='M'; M= -66, -74, -76, -17, 28, -81, 13, -4, 14, 33, 95, -70, -76, -62, -17, -70, -9, -16, -72, -51; /M: SY='S'; M= 20, -70, -61, -24, -74, 35, -65, -18, -62, -31, -65, 27, -70, -2, -67, 64, -51, -9, -82, -71; /M: SY='A'; M= 59, -70, -73, -70, -8, 11, 11, 33, -69, -57, 1, -65, -72, -66, -73, -6, -8, 18, -78, -64; /M: SY='F'; M= -64, 20, -83, -75, 62, -84, -72, -11, -20, 9, 41, -76, -47, -1, -71, -71, -61, 58, -66, 6; /M: SY='A'; M= 65, -71, -66, -16, -75, -60, -67, -31, -61, -71, -66, -13, -72, 17, -11, 35, -17, -20, -79, -1; /M: SY='E'; M= 16, -83, 10, 73, -87, -36, -59, -84, -11, -80, -73, -14, -67, 51, 15, -57, -64, -78, -84, -74; /M: SY='F'; M= 6, -76, -75, -17, 66, -78, -65, -56, 5, 17, 57, -6, -80, -12, -1, -68, -66, -59, -64, 4; /M: SY='E'; M= -67, -85, -45, 92, -74, -82, -59, -21, -50, -2, -66, -65, -66, 3, 0, -64, -66, -71, -79, 4; /M: SY='R'; M= -69, -82, -64, -13, -10, -22, -60, -74, -12, -1, -64, 25, -78, -52, 87, -63, 2, -73, -80, -65; /M: SY='D'; M= 1, -80, 53, 18, -84, 6, 17, -84, 30, -55, -74, 34, -71, -32, 9, -14, -62, -79, -89, -72; /M: SY='M'; M= -68, -78, -75, 1, -58, -84, -68, 17, 3, 47, 52, -72, -79, -62, 31, -27, -14, -18, -80, -63; /M: SY='I'; M= 7, -78, -78, -74, -61, -81, 10, 73, -3, 1, -48, -17, -77, -68, -3, -28, -12, -11, -81, -64; /M: SY='K'; M= -10, -77, -71, -63, -66, -77, -69, 1, 48, 26, -54, -8, -77, -59, 32, 5, -61, 15, -81, -67; /M: SY='E'; M= -63, -84, -47, 82, -77, 0, -58, -80, -51, -74, 31, -61, -66, 37, -20, 8, -64, -77, -78, 12; /I: I=-38; MI=0; MD=-97; IM=0; DM=-97; /M: SY='R'; M= -72, -87, 6, -53, -82, -80, -58, -88, 30, -81, -70, -58, -78, -46, 102, -65, -69, -81, -82, -68; /M: SY='T'; M= -21, -75, 6, -15, -74, -77, -71, -19, -64, -8, 12, -60, -72, 40, -69, -18, 73, -18, -90, -71; /M: SY='Q'; M= 3, -82, -63, -14, -14, -73, 23, -79, 31, -49, -22, 22, -76, 39, 36, -1, -12, -76, -81, -10; /M: SY='E'; M= 16, -81, -8, 63, -85, 1, -66, -83, -56, -33, -74, -61, -71, -8, 12, 30, -62, -76, -87, -77; /M: SY='G'; M= 13, -82, 5, -73, -89, 81, -76, -92, -20, -90, -81, -58, -75, -70, -77, -13, -70, -84, -84, -83; /M: SY='R'; M= -72, -84, -80, -70, -64, -87, -74, 42, 38, 15, 26, -73, -81, -63, 45, -75, -69, -14, 40, -64; /M: SY='M'; M= 27, -82, -37, 8, -73, -78, -68, -24, 22, -4, 33, -70, -78, 30, 14, -65, -49, -33, -81, 1; /M: SY='A'; M= 34, -79, -67, 24, -77, -74, -70, -70, 6, 9, -65, -4, -77, -6, 15, -15, -5, -31, -87, -75; /M: SY='A'; M= 74, -76, -73, -16, -81, -65, -73, -78, 20, -78, -71, -69, -76, -62, 4, -55, -64, -67, -81, -1; /M: SY='K'; M= 12, -87, -73, -60, -86, -80, -69, -80, 58, -80, 12, -66, -80, 18, 55, -67, -70, -27, -86, -75; /M: SY='Q'; M= 40, -84, -72, -24, -87, -36, -70, -80, 23, -38, -71, -34, -80, 49, 36, -62, -69, -39, -86, -77; /M: SY='R'; M= -10, -88, -9, -8, -91, -78, -64, -89, 28, -87, -76, 30, -80, 46, 57, -64, -27, -85, -90, -77; /M: SY='G'; M= -22, -88, -76, -84, -94, 85, -82, -99, -80, -96, -86, -64, 15, -78, -88, -61, -78, -93, -86, -90; /I: E1=0; IE=-380; DE=-380;» more |
Numerical results [info]
| Total number of hits | 48 in 48 different sequences |
| Number of true positive hits | 48 in 48 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Archaea, Bacteriophages, Prokaryotes (Bacteria), Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | Resolvase/invertase-type recombinase catalytic |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
48 sequences
BIN3_STAAU (P20384), BINL_STAAU (P18358), BINR_STAAU (P19241), CIN_BPP1(P10311), CIN_BPP7(P21703), CISA_BACSU (P17867), GIN_BPD10 (Q38199), GIN_BPMU(P03015), HIN_SALAE (Q02869), HIN_SALTY (P03013), PARA4_ECOLX (P22996), PINE_ECOLI (P03014), PINH_ECOLI (P76611), PINQ_ECOLI (P77170), PINR_ECOL6 (P0ADI1), PINR_ECOLI (P0ADI0), RES4_ECOLX (P13606), RES_CLOPE (Q93MD2), RES_CLOPF (P07945), STBA_PSEUB (Q52563), TNPT_PSEPU (P30739), TNR0_ECOLX (P05823), TNR1_ECOLI (P03012), TNR2_ECOLX (P04130), TNR3_ECOLX (P0ADI2), TNR3_KLEPN (P0ADI3), TNR4_KLEPN (P21424), TNR5_PSEAI (P06691), TNR6_ENTFC (Q06237), TNR7_ECOLX (P0C1G2), TNR7_ENTFL (P06693), TNR7_PSEPU (P0C1G3), UVP1_ECOLX (P18957), Y014_METJA (Q60329), Y2886_MYCTO (P9WL34), Y2886_MYCTU (P9WL35), Y2910_MYCBO (P65046), Y4BA_SINFN (P55368), Y4CG_SINFN (P55389), Y4LS_SINFN (P55559), YBCK_ECOLI (P77698), YEFC_BACSU (O35034), YIM3_BPPH1 (P10427), YL103_MIMIV (Q5UPI1), YNEB_BACSU (Q45057), YOKA_BACSU (O32006), YR080_MIMIV (Q5UPF4), YR771_MIMIV (Q5UPQ7)» more
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| PDB [Detailed view] |
20 PDB
1GDR; 1GDT; 1GHT; 1HX7; 1ZR2; 1ZR4; 2GM4; 2GM5; 2R0Q; 2RSL; 3LHK; 3PKZ; 3UJ3; 4M6F; 5C31; 5C32; 5C34; 5C35; 5CY1; 5CY2 » more |