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Entry: PS51743

General information about the entry

Entry name [info] ALPHAVIRUS_MT
Accession [info] PS51743
Entry type [info] MATRIX
Date [info] 01-JAN-2015 CREATED;
10-MAY-2017 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC51743
Associated ProRule [info] PRU01079

Name and characterization of the entry

Description [info] Alphavirus-like methyltransferase (MT) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=181;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=176;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.0275860; R2=0.0065701; TEXT='-LogE';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=22681.8007812; R2=7.9028573; PRIORITY=1; TEXT='Heuristic 0.1%';
/CUT_OFF: LEVEL=0; SCORE=1138; H_SCORE=31675; N_SCORE=9.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=681; H_SCORE=28064; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-23; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-380; BD=-380;
/M: SY='N';  M= -17, -39, -42,   4, -27, -49,   1, -15,   7, -50, -59,  44, -45, -22,  23,  43,   9,  28,  -5, -39;
/M: SY='F';  M=  -9, -75, -68, -16,  72, -34,   3, -58, -44, -28, -57, -41,  63,   2, -12,  14, -44, -11, -61,  12;
/M: SY='T';  M= -46, -71,  -3,  14,  19,  -8,  19, -19,  -3, -28,  -9,  16, -68, -11, -21,  25,  47, -34, -69,  35;
/M: SY='S';  M=  17, -12,  11, -32, -49,   8,  29, -74, -17, -75, -66,  30,  26,  37, -32,  48,  -1, -52, -81, -45;
/M: SY='S';  M= -12, -11, -32, -24,  17,  -7, -14, -22,  -6, -34,  13,  -2, -40,  -4,  22,  42,  23,  -1, -16,   9;
/M: SY='Q';  M=  -7, -38,   6,  17, -22, -40, -28, -41,   2,  -9,  -5, -16, -24,  26,   3,  22,  24,  20, -17,   1;
/M: SY='P';  M=   6, -24, -10, -47,  -6, -37,  46, -32, -58,  -3, -57,  20,  56, -39,   9,  19, -13,   2, -75,  11;
/M: SY='H';  M= -24, -73, -55, -58, -70,  15, 108, -76, -57, -55, -34,  37, -40, -51, -20,  49, -14, -41,  16, -53;
/M: SY='P';  M=  -7, -72,  28, -29, -77, -46, -62, -68, -57, -75, -68,  10,  71, -19, -46,  59,  31, -20, -84, -71;
/M: SY='H';  M= -69, -81, -53, -53, -68, -71, 149, -86, -58, -68, -54, -43, -70, -47, -52, -59, -68, -86,-103, -37;
/M: SY='P';  M=  37, -75, -63, -41, -78,  12, -25, -22, -62, -59, -29,   6,  90, -61, -70,  24, -40, -48, -79, -74;
/M: SY='M';  M=  30, -19, -74, -42,  42, -72, -64,   2, -37,   7,  64,  -7, -26, -66, -68, -62, -58,  34, -63,  38;
/M: SY='C';  M=  63,  66, -51, -38,  -3, -60,  39, -39, -64,   6, -56, -23, -72,  -9, -66,  22, -54, -56, -75,  -8;
/M: SY='K';  M=  54, -70, -58, -53, -74, -11,  17, -73,  62, -73, -63,  23, -67, -49,  27, -38,  -2, -65, -75, -19;
/M: SY='A';  M=  66,  -8, -37, -24, -68,  -1, -26,  -6, -63, -59,  32, -60, -48, -32, -68,  -8,  32,  12, -78, -36;
/M: SY='I';  M= -45,  10, -48, -37,  18, -76,  30,  44, -69,  33,  39, -36, -75, -44, -49,  21, -21,  18, -24, -26;
/M: SY='R';  M= -46, -80, -50,  61, -77, -73,  -3, -81, -26, -59, -66, -10, -67, -22,  91,  -1, -39, -75, -78, -65;
/M: SY='N';  M=  -6, -31, -24,   8, -46, -31,  31, -17,  14,  -2, -10,  68, -70, -34,  27, -20,   8, -23, -81, -39;
/M: SY='H';  M=   3,  56, -20, -46, -15, -75,  68,  10, -42,  33,  12, -30, -77, -38,  -7, -48, -47,  12, -17,  19;
/M: SY='E';  M=  16, -12, -33,  58,  20, -55, -26,  10, -59,  30,  34, -48, -69, -36, -42, -21, -23, -27, -72, -35;
/M: SY='N';  M= -38, -69, -58,  -4, -36, -69, -28, -24, -55,  42, -49,  56, -71, -17,  19, -21,  52, -54, -76,   8;
/M: SY='Y';  M= -19, -76,  12,  30,  31, -40,  27, -62,  11,  -8, -57,  15, -71,  18,  -6, -29, -60, -20,  19,  61;
/M: SY='Y';  M= -27, -31,  11,   6,  -8, -73,   0,   5,  -9,  23,   5,  24, -73, -21,   1, -26,  -6,   5,  33,  41;
/M: SY='C';  M= -11,  44, -79, -54,  16, -79,  -6,  27, -44,  39,  37, -47, -79, -70, -50, -68, -45,  42,   9,   9;
/M: SY='Y';  M=   3, -24, -36, -12, -27,  -1,  20,   9, -12,  30,  18, -32, -73, -59,  20, -15, -21,  -1,  20,  32;
/M: SY='P';  M=   6, -15,  35, -19, -46, -13,  25, -70,   7, -26,   6,  14,  37, -53,  21,  27, -14, -48,  -6, -15;
/M: SY='H';  M= -17, -12, -21,  -6, -21, -32,  39, -20,  21,  -6,  31,  34, -36,   6,  25,  16, -33, -63,  28,  19;
/M: SY='Y';  M= -12,  37, -74, -73,  35, -34,  29,  12, -59,  32,   1, -12, -79, -45, -70, -23, -60,  21, -61,  59;
/M: SY='P';  M= -39,  15, -35, -46, -43,  28, -33,  -4,  27,  -5, -59, -15,  70, -38,   9, -20, -31,  -7, -77, -42;
/I:         I=-9; MD=-23;
/M: SY='N';  M= -39, -34,  11, -57,  -7,  18, -24, -35,  33, -40, -33,  33, -25, -15,  18,  22,   6, -35, -75,  15; D=-9;
/I:         I=-9; MD=-23;
/M: SY='R';  M= -75, -89,  -8,  27, -53, -33,  12, -80,  -2, -21, -74,  26, -57, -42,  31, -12, -29, -25, -91, -15; D=-9;
/I:         I=-9; MI=0; MD=-23; IM=0; DM=-23;
/M: SY='P';  M= -41, -93,  39, -21, -57, -29, -33, -61,   7, -57, -81, -28,  39,  23, -36,  -3, -31, -38, -96, -52; D=-9;
/I:         I=-9; DM=-23;
/M: SY='V';  M=  16, -15, -18, -37,  18, -46, -16,  -4, -74, -24, -17, -49, -47, -28, -77,   9,  -1,  39, -16, -17; D=-9;
/I:         I=-9; DM=-23;
/M: SY='P';  M= -16, -75,  -6, -16, -22, -56,  17,  -2,   4,  -5, -57, -19,  41, -24,  -8, -11,  40,   2, -16,  13; D=-9;
/I:         I=-9; DM=-23;
/M: SY='F';  M= -45,  35, -80, -77,  62, -57, -70,  27, -73,   3,   0, -45, -79, -75, -74, -36,   1,  52, -62,  35;
/M: SY='I';  M= -42, -31, -53, -70,   0, -78, -26,  47,  15,  24,  20, -69, -75, -64, -64,   4, -37,  31,  27,  44;
/M: SY='D';  M= -47, -76,  90,  26,  12,  -6, -57, -75, -39, -74, -73, -44, -67, -25, -62,  35, -54, -27,   0, -25;
/M: SY='I';  M= -24,  -9, -83, -78,  32, -83, -77,  75, -75,  -2,  42, -75, -11, -48, -77, -69, -28,  40, -71, -52;
/M: SY='G';  M= -42, -76, -61, -62, -81,  85, -66, -85,  59, -63, -71, -50, -67, -56, -27, -29, -64, -79, -73, -73;
/M: SY='G';  M=   8, -32,  -5,   7, -82,  74, -39, -82,  -5, -81, -71, -53,  43, -17,  -7, -20, -47, -77, -77, -74;
/M: SY='N';  M=  18,  28,  15, -10, -76,  -7,  -3, -40, -37, -76, -68,  80, -69, -34, -30,  48, -48, -53, -87, -69;
/M: SY='W';  M= -64, -79, -69, -26,  26, -40, -68,  10,  59, -15, -57, -65,  53, -58, -38, -27, -61,  -1,  88,  -5;
/M: SY='L';  M=   6, -10,  -4, -46,  28, -45,  -6, -12, -50,  39,  -9, -35, -47, -37,   5,  10,  -7,  23, -15, -31;
/M: SY='R';  M=   1, -39, -12,  -3,  20, -25,  23, -66,   2, -38, -61,  13, -69,  19,  35,  32,  21, -25, -72,  11;
/M: SY='H';  M= -19, -41, -38, -33,  15, -35, 103,  -5,   0,  -2, -25, -16, -73, -55,   0, -20, -45,   4, -19,  28;
/M: SY='L';  M=  -2,  -9, -77, -73,  22, -77, -67,  25, -68,  47,  47,   6, -78, -45, -10, -52, -59,  27,  10,  -9;
/M: SY='R';  M=  -5,  -9,   2, -42, -24, -22,   3, -38,  40,  -2,  -2,  17, -32,  12,  55,  -4, -44, -54, -14, -10;
/M: SY='R';  M=  22, -74, -40, -21, -23, -65,  19, -69,  22, -43,   8,  28, -50,  20,  56,   7, -15, -54,  -8,  33;
/M: SY='G';  M= -32, -75,  -9,   2, -76,  55, -12, -55,  15, -40, -34,  26,  -6,  -3,  27,  19, -57, -16, -79, -69;
/M: SY='H';  M= -28,  13,   1,   6, -13, -22,  69, -50,  -8, -27, -62,  44,  12, -17,  43,   6, -14, -43, -82, -59;
/I:         I=-23; MD=-58;
/M: SY='K';  M= -32, -37,  20, -40, -18, -14,   9, -46,  31, -42, -63,  31,   1,  11,   6,  24,  23,  -5, -78,  -1; D=-23;
/I:         I=-23; MD=-58;
/M: SY='N';  M= -42, -86,  31, -65, -43, -13,   7, -63, -24, -29, -13,  53, -20,  -9,  21, -22, -48, -20, -96, -76; D=-23;
/I:         I=-23; MI=0; MD=-58; IM=0; DM=-58;
/M: SY='W';  M= -49, -93, -31, -41,  14, -44,  15, -65, -19, -43,   5,   5, -91, -30, -17,  -3,   4, -48,  20,   5; D=-23;
/I:         I=-23; DM=-58;
/M: SY='V';  M= -20,   4,  28, -51, -11, -77, -13,   8, -50, -10, -21, -46, -75, -68, -22, -34,  -6,  72,  -9,  18;
/M: SY='H';  M= -26, -77, -30,   4, -68, -54, 128, -58, -20, -56, -56, -21, -68, -23, -19, -21,   6,  -4, -93, -25;
/M: SY='C';  M= -31,  80, -39, -70,  29, -40,  17,   6, -67,   4,  -1, -63, -77, -37, -22,  29,  -8,  20, -70,  32;
/M: SY='C';  M= -35, 124, -24, -75, -30, -28, -21,  24, -58, -15, -14, -67, -83, -47, -50, -48, -60,  12,   3,  13;
/I:         I=-2; MD=-4;
/M: SY='C';  M= -18,  86, -55, -66,  17, -46, -57, -55, -58, -32,   8,  85, -78, -61,   0,  -7,  -4, -67, -82, -12; D=-2;
/I:         I=-2; MD=-4;
/M: SY='P';  M= -11, -28, -66, -40, -53, -70, -28, -71, -37, -46, -39, -49,  98, -39,  48, -21,  -3, -43, -77,  -5; D=-2;
/I:         I=-2; MD=-4;
/M: SY='I';  M= -28,  33,   3, -68,  -5, -78, -15,  36, -19,  26,  19,  11, -30, -66,   2, -66, -10,  16, -22,   0; D=-2;
/I:         I=-2; MD=-4;
/M: SY='L';  M= -40, -36, -78, -49, -25, -57,  -1,  30, -16,  52,   2, -42, -25, -68, -32, -33, -42,  29, -72,  18; D=-2;
/I:         I=-2; MD=-4;
/M: SY='D';  M= -39,   9,  79,  15, -81, -22,  21, -76, -58, -77, -73, -12, -68, -30, -65,  22,  39, -25, -95, -70; D=-2;
/I:         I=-2; MD=-4;
/M: SY='P';  M=  27, -39, -32, -66, -29,  -8,  -6,  14, -42, -32, -12, -28,  50, -65, -72,  27, -19,  17,  11, -15; D=-2;
/I:         I=-2; MD=-4;
/M: SY='R';  M= -15, -81, -26, -18, -77, -74,  -3, -80,  70, -56, -66, -11, -71, -45,  76, -60, -63, -54, -77, -24; D=-2;
/I:         I=-2; MD=-4;
/M: SY='D';  M= -71, -84, 115, -35, -91, -68, -23, -89, -58, -88, -86, -22, -70, -57, -67, -59, -61, -86,-107, -73; D=-2;
/I:         I=-2; MD=-4;
/M: SY='A';  M=  31,  -1,  -9, -44, -11,  -1,  30, -18,  -1,  -5, -60,   3, -76, -15, -31,  -3, -19,  12, -83, -65; D=-2;
/I:         I=-2; MD=-4;
/M: SY='A';  M=  38, -37, -69, -10,  -7, -36,  19, -10, -16, -10,  -6, -30, -74,  31, -49,  -5,   5,   4, -79, -15; D=-2;
/I:         I=-2; MD=-4;
/M: SY='R';  M= -72, -88, -68, -56, -81, -82, -24, -88, -29, -80, -69, -61, -81, -45, 111, -66, -71, -81, -81, -67; D=-2;
/I:         I=-2; MD=-4;
/M: SY='Y';  M= -48, -88, -73, -54,  13, -58,  73, -51, -19, -45, -62, -30, -85,   0,  -2, -70, -26, -59,  20,  88; D=-2;
/I:         I=-2; MI=0; MD=-4; IM=0; DM=-4;
/M: SY='P';  M= -12, -89,  10,  22, -54, -83, -32,  12, -19, -76, -18, -70,  50,  -4, -75, -66,  31, -52, -93, -80; D=-2;
/I:         I=-2; DM=-4;
/M: SY='E';  M= -69, -43,  21,  48, -83, -58, -11, -43, -15, -23, -38, -14, -76,  11,  -9,   3,   7,  -5, -93, -76; D=-2;
/I:         I=-2; DM=-4;
/M: SY='R';  M=  13, -83,  33,   6, -83, -74, -62, -52, -29, -68, -72,   6, -77,  -6,  72, -32, -24, -41, -87, -46; D=-2;
/I:         I=-2; DM=-4;
/M: SY='M';  M=   9, -39, -36,   2, -28, -53, -71,  -7, -49,  -1,  40, -69,  29,   2, -54,   2,  21,  -6,  28, -14; D=-2;
/I:         I=-2; DM=-4;
/M: SY='L';  M= -10, -32, -27, -13, -57, -62, -69,   5, -22,  43,  22, -51, -76, -64,  13, -29,  20,  27, -80, -39; D=-2;
/I:         I=-2; DM=-4;
/M: SY='H';  M=  -5, -37,   7, -32,  -9, -63,  56, -53,   5, -53,  29,  17, -30, -35,  19,  56, -52,  -8, -22, -36; D=-2;
/I:         I=-2; MI=0; MD=-4; IM=0; DM=-4;
/M: SY='R';  M= -60,-100, -76,  -3, -39, -93,  38,-102, -33, -98, -89,  30, -95, -72,  44, -56,   6, -97,-108, -85; D=-2;
/I:         I=-2; DM=-4;
/M: SY='N';  M= -80, -90, -48, -71, -41, -78,  31, -89,   8, -49, -17,  72, -89, -64,  36, -29, -71, -89, -97, -18; D=-2;
/I:         I=-2; DM=-4;
/M: SY='P';  M= -45, -10, -12,   7, -24, -34, -75, -32, -58,  12,   5, -78,  35,   7, -79, -17, -40, -30, -83,  18; D=-2;
/I:         I=-2; DM=-4;
/M: SY='H';  M= -21, -85,   5, -17, -49, -38,  34,   8, -17,  19, -61, -33, -83, -17, -13,  15, -68, -50, -85,   8; D=-2;
/I:         I=-2; DM=-4;
/M: SY='N';  M= -86, -42,   0, -27, -30, -27, -86, -22,  -6, -19, -83,  12, -48, -50, -26, -20,  -6, -55, -25, -43; D=-2;
/I:         I=-2; MI=0; MD=-4; IM=0; DM=-4;
/M: SY='H';  M= -76, -92, -15, -18, -59,  -1,  22, -74, -10, -67, -25, -48,   7,   0, -18, -53,  14,  17, -96, -21; D=-2;
/I:         I=-2; DM=-4;
/M: SY='S';  M=  40,  -7, -10, -64, -85, -44, -71, -61, -34, -83, -75, -61,  32,   1, -71,  63, -55, -72, -88, -47; D=-2;
/I:         I=-2; MI=0; MD=-4; IM=0; DM=-4;
/M: SY='C';  M= -90, 124,-107,-109,-100,-104,-108,-107,-104, -98, -98, -45,-120,-112,-111, -92, -89, -95,-130,-110; D=-2;
/I:         I=-2; DM=-4;
/M: SY='F';  M= -56,   4, -41, -33,  12, -44,  -1, -87, -88, -17, -84, -12, -34,  -7, -56, -23,   7, -48,-101, -49; D=-2;
/I:         I=-2; DM=-4;
/M: SY='H';  M= -68,-101,   7, -18,-100, -68,  53,-102, -13, -47, -26,  52, -97, -76, -37, -54, -83,-102,-117, -87; D=-2;
/I:         I=-2; DM=-4;
/M: SY='R';  M= -83, -99, -13, -60, -98,  11, -88, -64,   3, -55, -88, -40, -57, -79,  26, -40,  19, -26,-105, -92; D=-2;
/I:         I=-2; DM=-4;
/M: SY='F';  M=   3, -45, -12, -92,  40, -17, -92, -34, -93, -40, -79, -87, -99, -93, -96, -18, -24,  -1, -89, -22; D=-2;
/I:         I=-2; DM=-4;
/M: SY='Q';  M= -44,-100, -72,  36, -99,  -8, -79, -54, -49, -46, -83, -26, -51,  56, -40, -16, -80, -32,-100, -89; D=-2;
/I:         I=-2; DM=-4;
/M: SY='N';  M= -40, -92,  27,  19, -43, -16,  10, -91, -27, -93, -87,  39, -86, -41, -55, -30,   4, -34,-105, -85; D=-2;
/I:         I=-2; DM=-4;
/M: SY='C';  M= -74, 134, -89, -86, -51, -87, -89, -88, -18, -65, -79, -78,   8, -89, -46, -75, -73, -78,-106, -90; D=-2;
/I:         I=-2; DM=-4;
/M: SY='S';  M= -26, -38,   7,   6, -18, -13,  14, -59,  13, -62, -71,  12,  -8, -33,  -2,  23,   9,  -5, -86, -24; D=-2;
/I:         I=-2; DM=-4;
/M: SY='H';  M= -66,  39, -48, -47,  23, -83,  62,  23, -35, -45, -53, -44, -81, -37, -35, -68,  -8,  51, -16,  36; D=-2;
/I:         I=-2; DM=-4;
/M: SY='K';  M= -13,  -5, -26,   8, -76, -56,  -6, -28,  53, -70,   7, -13,   8,  49,  44,   0,   9, -67, -77, -65;
/I:         I=-26; MI=0; MD=-67; IM=0; DM=-67;
/M: SY='S';  M=  41,  14, -20, -25, -72,   7, -63, -44,   1, -70, -64,  -6,  -2, -38, -21,  52,  22, -14, -78, -15;
/M: SY='D';  M= -24, -41,  50,  26, -49, -18, -15, -76,  32, -56, -35,  -1,  36,   5,  16,  13,   5, -72, -80, -33;
/M: SY='Y';  M=   8,   5, -51, -48,   0, -69,  24,  -4, -24, -10, -22,  17, -73, -39,  19,  -1,  29,  24,  11,  44;
/M: SY='A';  M=  50,  13, -50, -70,  -7,  26, -71,  26, -69,  19,   8, -65, -33, -66, -73,  -9, -57,   0,   6, -37;
/M: SY='F';  M= -63, -71, -53, -33,  72, -81, -70,  40, -55,   0,  16, -71, -77, -73, -73, -33,  14,  42, -60,  20;
/I:         I=-29; MD=-75;
/M: SY='M';  M= -20, -35, -35, -89,  37, -93, -82,  23, -86,   1,  58, -86, -92, -84, -43, -38, -30, -17, -80,  -6; D=-29;
/I:         I=-29; MD=-75;
/M: SY='H';  M= -87,-103, -10, -78, -21, -14,  81, -99, -37, -90,   2, -74, -95,  20, -39, -16, -87, -99,-100,   2; D=-29;
/I:         I=-29; MD=-75;
/M: SY='D';  M= -31,-104,  77, -65, -56, -60, -83, -65, -81,-102, -44, -50, -94, -82, -30, -25, -58, -74,-119, -94; D=-29;
/I:         I=-29; MI=0; MD=-75; IM=0; DM=-75;
/M: SY='E';  M=  33,  10, -68,  37, -86, -34, -77, -80, -71, -57, -78, -36, -79, -66, -77,  32,   1, -26, -93, -36; D=-29;
/I:         I=-29; DM=-75;
/M: SY='L';  M=  -7,  -9, -79, -50, -34, -61, -70,  37, -73,  55,  54, -27, -78, -69, -73, -68, -37,  37, -75, -27;
/M: SY='H';  M= -65, -77,  28, -20, -63, -72, 122, -43, -43, -30, -14, -26, -71,   9, -57, -38, -62,  26, -88,  10;
/M: SY='Y';  M= -11, -27,  16,   6,  29, -31,  44, -67, -58, -65, -61, -53, -70,   9, -42,  56, -11, -46, -61,  67;
/M: SY='W';  M=  -3, -74, -81, -74, -16, -28, -76,  17, -71,  26,  20, -75,  -2, -70, -74, -48,   6,  41, 108,  -6;
/M: SY='Y';  M= -59, -74, -34, -45, -14, -15,  -1, -63, -18, -62, -57, -31, -34, -24, -42,  44,  23, -44,   0, 102;
/M: SY='D';  M= -65, -80,  92, -31, -46, -67,   0, -73,  -8, -14, -40, -46,  55, -56, -22, -11,  -8, -55, -14, -44;
/M: SY='M';  M= -10, -27, -12,  -2, -27, -38, -20,  57, -21,   3,  79, -21, -45, -38, -40, -14, -29, -10, -25, -16;
/M: SY='D';  M= -25, -75,  51,   2, -26, -22, -13, -52, -11, -58, -66, -50,  41,  34, -16,  33,  29, -37, -77,  10;
/M: SY='L';  M= -12, -30, -78, -50,  13, -59,   3,  11, -71,  56,  40, -46,  29, -68, -49, -68, -42,  22, -71, -10;
/M: SY='Q';  M=   3,   4,   9,  19,  -7, -42,  -8, -26,  11,  -7,   4,  -7, -69,  28,   5,  16,   6,   1, -22,  -1;
/M: SY='D';  M=   7, -74,  58,  44, -51, -12,  -1, -58,  -7, -64, -22,  15, -40,  11, -38,   5,  23, -39, -14, -44;
/I:         I=-23; MD=-58;
/M: SY='M';  M= -56, -78, -45, -82,  16, -89, -77,  26, -81,  48,  53, -82, -86, -77, -51, -25, -36,  17, -79, -59; D=-23;
/I:         I=-23; MD=-58;
/M: SY='C';  M=  31,  52, -96, -91, -22,  -7, -93, -17, -90, -12,  -8, -88, -96, -38, -93, -76, -78,   4, -97, -84; D=-23;
/I:         I=-23; MD=-58;
/M: SY='D';  M= -17,   7,  23, -13, -99, -31, -16, -97,   5, -96, -39,  23, -24,  -1,  -8, -16, -31, -93,-105, -89; D=-23;
/I:         I=-23; MI=0; MD=-58; IM=0; DM=-58;
/M: SY='F';  M=  48,   7, -78, -75,  71,  -2, -41, -14, -45, -37, -26, -70, -79, -73, -75, -16, -26, -45, -63,  14; D=-23;
/I:         I=-23; DM=-58;
/M: SY='M';  M= -29,   9, -50,  -9, -10, -79, -35,   2, -42,  36, 104, -72, -76, -45, -37, -36, -21, -47, -74, -10; D=-23;
/I:         I=-23; DM=-58;
/M: SY='D';  M= -11, -35,  34,  21, -18, -21,   3,  -9, -14,   3, -59,  16, -72, -20,  27,  -6,  -9,   1, -81, -38; D=-23;
/I:         I=-23; DM=-58;
/M: SY='R';  M=  -2,  27, -10, -11, -73, -42,   3, -24,  16, -27, -63,  36, -43,  -2,  45,  37,  -6, -32, -83, -66; D=-23;
/I:         I=-23; DM=-58;
/M: SY='H';  M=   7, -41, -59, -38, -20, -67,  79, -27,  53, -59, -28,  -7,  45, -35,   9, -14,  -2, -24, -79, -39;
/M: SY='G';  M= -58, -76,  29,   1, -79,  51,  -5, -54,  48, -62, -69,  47, -48, -32,  13, -25, -18, -76, -80, -69;
/M: SY='V';  M=  31,  10, -53, -68, -35, -51, -72,  31, -69,  15,  28, -68,  32, -67, -72,  -1,  12,  36, -78, -63;
/M: SY='H';  M= -43, -75,  -3,  23, -69, -70,  44, -14,  42, -19, -16,   2, -31,  14,  34,  -5,  22, -11, -79, -18;
/M: SY='T';  M= -59, -19, -47,  -1, -42, -74,  11,  10,  23,  -5,   2, -10, -69,   9,  33, -10,  41,  31, -80, -61;
/I:         I=-25; MI=0; MD=-63; IM=0; DM=-63;
/M: SY='L';  M=  18,  14, -80, -75,  34, -18, -69,  -8, -72,  47,  32, -74, -79, -71, -41, -65, -22,  27, -68,   9; D=-25;
/I:         I=-25; DM=-63;
/M: SY='Y';  M= -65, -19,   0, -38,   6, -76,  34,  21,   3,   6,  -8, -41, -52, -38, -17, -10, -29,   5,  51,  75;
/M: SY='A';  M=  54,  27, -71, -45,  16,  37,  10,   5, -68, -12,   2, -63, -73, -36, -71, -54, -60,  -9, -68,  21;
/M: SY='T';  M=  28,  50, -63, -64, -10, -16, -30, -24, -62, -65, -62, -21, -67, -62, -68,  40,  71, -24,  21, -22;
/M: SY='M';  M= -49,   5, -38, -76,  60, -80, -38,  31, -73,  33,  81, -43, -78, -71, -73, -42, -27,  14, -65, -26;
/M: SY='H';  M= -59, -33, -21, -29, -34, -78,  66,  44, -68,  12,  48, -65, -74, -64, -43,  -6, -12,  51, -82, -54;
/M: SY='F';  M= -34, -20, -77, -74,  69, -60, -10,  22, -70,  28,  19, -44,  -1, -36, -44, -66,  14, -19,  12,  43;
/M: SY='P';  M= -20, -12,  20, -39, -40, -65,  -1, -73, -60, -79, -69, -36, 106, -37, -38,  20,  -3, -74, -80, -28;
/M: SY='P';  M= -19, -35,  -2,  12, -46,  12, -67,  -4, -23, -67, -62, -26,  79, -14, -67,  11, -11,  25, -80, -71;
/M: SY='E';  M=   6, -77,  13,  90,  -6, -51, -56, -25,  -6, -60, -67,   9, -44, -42, -32, -43, -58, -32, -77, -40;
/M: SY='M';  M=  12, -70, -48, -56, -50, -75, -18,  49, -43,  43,  72, -33, -74, -29, -70, -21, -44,   0, -72,  -1;
/M: SY='L';  M= -15,  -3, -56, -37,  30, -78,  -6,  -4, -71,  61,  35, -72, -77, -67, -46, -14,   9,  -3,  21, -50;
/M: SY='D';  M=  11, -73,  32,   6,  16, -58,  16,   8, -37,   8,  -2, -37, -23, -30, -14,  11,  -7,  -6,  15,  27;
/I:         I=-22; MI=0; MD=-55; IM=0; DM=-55;
/M: SY='K';  M=   4, -35,  27,  19, -72,  36, -11, -76,  39, -75, -31,  -4, -10,  -1,   0, -20,  -1, -57, -74,  19; D=-22;
/I:         I=-22; MI=0; MD=-55; IM=0; DM=-55;
/M: SY='D';  M= -19, -18,  49,   9, -49, -32,   9, -63,  18,  -8,  33,  13,  -1, -13,   6,  -3,  23, -18, -83, -64;
/M: SY='E';  M=   7,  13, -17,  46, -32,   6,  -4, -71,   5, -37, -64, -11,   8,  -9,  -7,  32,  11, -36, -76,  -3;
/M: SY='S';  M= -11, -32,  -4, -37, -12,  59, -65, -11, -42, -69, -20, -16, -68, -40, -68,  62, -51,   3, -77, -66;
/M: SY='L';  M= -32, -12,   6, -17,  24, -55,   2,   0,   3,  32, -16, -39, -11,   1, -41,  12, -10,   4, -67,  32;
/M: SY='N';  M= -44,  -5, -16, -21,  13, -73,  20,  26, -50,  33, -11,  50, -77, -62, -27, -24, -45, -10,  28,  46;
/M: SY='P';  M= -20, -82,   1,  -3,   8, -68,  -1, -54, -18, -21, -37,   0,  99, -35,  -2, -26, -42, -50,  -9, -66;
/M: SY='W';  M= -12, -76,  40,  36,  11, -10,  27, -50, -13, -23, -64,   1,  -6, -33, -14,  15,  -8, -25,  66, -16;
/M: SY='L';  M=  -2,  22, -28, -41,  12, -18, -24,  24, -54,  43,  16,   2, -76, -67, -71, -19, -13,  19, -71,   8;
/M: SY='Y';  M= -29, -75,  24,   6, -28,  20, -48, -69, -24, -42, -61,  54, -72, -16, -31,  -4, -26, -69, -56,  88;
/M: SY='C';  M=  -5,  61, -12,   9, -45,  21, -22, -38, -34, -39,  -8,  -6, -69,  22,  -5,   6,  40, -18,  16,   3;
/M: SY='F';  M= -31, -17, -46,  -5,  53, -46,  28,   7, -17,   6, -51,  11, -74, -24,  25, -34,  19,  -5, -64,  31;
/M: SY='W';  M= -34, -26, -10,  26,   9, -73, -13,   0,  16, -19, -59, -22, -72, -27, -11, -22, -33,   0, 121,  24;
/M: SY='Y';  M= -16,   0, -30,  15,   7, -74,   4,  27,   8, -18,  -9, -36, -72, -13,  12,  -7, -16,  22, -64,  56;
/M: SY='H';  M= -42, -75,  17, -22, -26, -72,  45,  21,  43, -18, -55,  -3, -70, -13,  28, -20,   8,  13,  12, -11;
/M: SY='D';  M= -48, -76,  54,  29,  -9,   5,  -7, -32,  14, -39, -65,   6,   1, -34,  19,   5,   7, -18, -80, -33;
/M: SY='D';  M= -40, -35,  48,   2, -27,  34,  13, -57,  24, -53, -68,  42, -19, -23,  10,   1,   1, -55, -82, -66;
/M: SY='D';  M= -47, -41,  50,   0, -52,  48,  17, -56,   5, -73, -67,  18, -42, -26,  23,  -6, -33,   6, -28, -43;
/I:         I=-8; MD=-21;
/M: SY='D';  M= -37, -29,  29, -11, -29, -10, -72, -83,  22, -18, -76,  -7, -34, -40,  20,  -2, -11, -61, -91, -45; D=-8;
/I:         I=-8; MI=0; MD=-21; IM=0; DM=-21;
/M: SY='I';  M= -39, -36, -39, -51,  43, -25, -78,  54, -44,  23, -47, -51, -82, -77, -79, -52, -64,  25,  23,  -1; D=-8;
/I:         I=-8; DM=-21;
/M: SY='H';  M= -28,  19, -66, -22, -19, -52,  43,  14,  13,   3,   7, -17, -34,   4,  -3,  10,  12,  27,  27, -12;
/M: SY='F';  M= -68, -75, -50, -53,  82, -78, -29, -24, -37, -32,  -8, -49, -79, -12, -12, -34,   8, -15,  54,  79;
/M: SY='Y';  M= -12, -33,   3, -40,  35,  -9,   2,  -8, -13, -24,  -2, -59, -72, -41, -22,  22,  29, -20,  40,  63;
/M: SY='F';  M= -42, -77, -72, -35,  80, -41, -32, -42, -66, -33, -56, -28,  76,  -5, -52, -26, -30, -15, -55,  37;
/M: SY='D';  M= -37, -76,  54,   8,  -9,  24, -24,  -6, -25,  12, -57, -23, -25, -20,  12, -34, -43,  -6, -72,  29;
/I:         I=-38; MD=-97;
/M: SY='G';  M= -18, -76,  39, -16, -82,  67, -63, -80, -36, -57, -74,  54, -71, -61, -45, -17, -18, -36, -85, -75; D=-38;
/I:         I=-38; MD=-97;
/M: SY='D';  M= -27,  29,  63,  17, -78,   0,  47, -70, -13, -49, -69,  23, -72, -20, -45,   2, -59,  11, -92, -68; D=-38;
/I:         I=-38; MD=-97;
/M: SY='S';  M=  15, -10, -45,   7,  -9,  -9, -38, -73,  -7, -60, -27, -17,  28, -45, -15,  41,  22, -41,  20, -20; D=-38;
/I:         I=-38; MI=-97; IM=-97; DM=-97;
/M: SY='S';  M=   4,  -4,  -8, -14, -76,  44, -61, -73, -58, -75, -68,  24, -65,  14, -64,  58,  40, -50, -82, -70;
/M: SY='E';  M=   9,   0,  12,  50, -22,   7,   1, -46, -43,   3,  24,   2,  -2, -53, -42,   1,  -7, -12,   9, -63;
/M: SY='S';  M=  38,  16, -61, -37, -73,  45,   6, -52, -41, -38, -65,  -6,  -8, -58, -48,  56, -26, -24, -78, -35;
/M: SY='Y';  M= -70, -81, -70, -73,  -1, -77, -38, -35, -46, -53, -27, -49, -82, -61, -62, -49, -44, -60, -29, 131;
/M: SY='T';  M= -58,   3,  -5,  46, -12, -71, -21,  -5, -18, -32,  -6,   9, -23,   0,  -5,  -2,  51,  18, -22, -29;
/M: SY='H';  M= -41, -80, -52,  -6, -21, -69, 125, -60, -50, -69, -56,   9, -69,  73, -11, -40, -64, -79, -87, -45;
/M: SY='D';  M= -58, -31,  55,  -5, -79, -48,  14, -77,  19, -53, -70,  29,  55, -51,  -4,  50, -23, -74, -86, -69;
/M: SY='W';  M= -33,   2, -75, -42,  32, -78, -33,   2, -11,  38, -22, -71, -21, -42,  17, -17, -34,  15,  52,  47;
/M: SY='N';  M=  15, -72,  45,  30, -39, -60,  -6, -75,  13, -58, -68,  46, -29,   5,   0,  35, -12, -70, -16, -66;
/I:         I=-26; MD=-67;
/M: SY='T';  M=  -7,  21,  22, -32, -71, -68, -15, -19, -16, -26, -18,  45, -48,  -5, -65,   7,  51,  -6, -88, -19; D=-26;
/I:         I=-26; MD=-67;
/M: SY='W';  M= -42, -83, -90, -84, -49, -69, -75,  11, -62,  46, -50, -86, -88, -78, -81, -78,  -6,   4,  77,  53; D=-26;
/I:         I=-26; MI=0; MD=-67; IM=0; DM=-67;
/M: SY='R';  M= -13, -36, -17, -67, -11, -22, -29, -22,   9,  24,  16, -68, -81,  11,  25,  12, -30, -49, -83, -67; D=-26;
/I:         I=-26; DM=-67;
/M: SY='S';  M=  -4, -74,  20,  17, -38,   1,  18, -33,  28, -45,  -1,   0,  -4,  33, -25,  44, -24, -56, -18, -37;
/M: SY='W';  M= -56, -85, -85, -77,  31, -78, -65,  20, -70, -12, -54, -81, -80, -42, -52, -74, -72, -40, 138,  85;
/M: SY='L';  M= -30, -70, -77, -71,  35, -79,  18,  15, -71,  58,  56, -49, -48,  -7, -70, -24,   1,  -3, -70, -49;
/I:         E1=0; IE=-380; DE=-380;
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 131 in 131 different sequences
Number of true positive hits 131 in 131 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Taxonomic range [info] Eukaryotic viruses
Maximum number of repetitions [info] 1
Feature key [info] DOMAIN
Feature description [info] Alphavirus-like MT
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
131 sequences

194K_TRVSY  (P05080    ), 1A_AMVLE    (P03589    ), 1A_BBMV     (Q00020    ), 
1A_BMV      (P03588    ), 1A_CCMV     (P27752    ), 1A_CMVFN    (P17769    ), 
1A_CMVII    (Q83270    ), 1A_CMVIX    (Q66121    ), 1A_CMVNT    (O40976    ), 
1A_CMVO     (P20122    ), 1A_CMVQ     (P06011    ), 1A_CMVY     (Q83264    ), 
1A_OLV2I    (Q83943    ), 1A_PSVJ     (P28726    ), 1A_PZSVT    (Q9DUT3    ), 
1A_TAV      (P28931    ), 1A_TOBSV    (P89680    ), ALPHA_BSMV  (P17595    ), 
POLG_ASGVK  (Q6PLS1    ), POLG_ASGVP  (P36309    ), POLG_CILVC  (Q1KZ59    ), 
POLG_MRFVC  (Q91TW9    ), POLN_AHEV   (Q6QLN1    ), POLN_AURAV  (Q86924    ), 
POLN_BFV    (P87515    ), POLN_CHIK3  (Q5XXP4    ), POLN_CHIKS  (Q8JUX6    ), 
POLN_EEEV1  (Q306W6    ), POLN_EEEV8  (Q306W8    ), POLN_EEEVF  (Q4QXJ8    ), 
POLN_EEVV3  (P36327    ), POLN_EEVVC  (Q8V294    ), POLN_EEVVM  (Q9WJC7    ), 
POLN_EEVVP  (P36328    ), POLN_EEVVT  (P27282    ), POLN_GETV   (Q5Y389    ), 
POLN_HEVBU  (P29324    ), POLN_HEVCH  (Q81862    ), POLN_HEVCT  (Q9IVZ9    ), 
POLN_HEVHY  (Q9WC28    ), POLN_HEVME  (Q03495    ), POLN_HEVMG  (Q6J8G2    ), 
POLN_HEVMY  (Q04610    ), POLN_HEVPA  (P33424    ), POLN_HEVUS  (Q9YLR1    ), 
POLN_MAYAB  (Q8QZ73    ), POLN_ONNVG  (P13886    ), POLN_ONNVI  (O90370    ), 
POLN_ONNVS  (O90368    ), POLN_RRVN   (P13887    ), POLN_RUBVB  (Q6X2U4    ), 
POLN_RUBVC  (Q6X2U2    ), POLN_RUBVD  (Q9J6K9    ), POLN_RUBVM  (Q86500    ), 
POLN_RUBVN  (Q8BCR0    ), POLN_RUBVO  (Q99IE7    ), POLN_RUBVR  (O40955    ), 
POLN_RUBVT  (P13889    ), POLN_RUBVV  (Q99IE5    ), POLN_SAGV   (Q9JGL0    ), 
POLN_SFV    (P08411    ), POLN_SINDO  (P27283    ), POLN_SINDV  (P03317    ), 
POLN_SLDV   (Q8QL53    ), POLN_SPDV   (Q8JJX1    ), POLN_WEEV   (P13896    ), 
POLR_ELV    (P35928    ), POLR_EPMV   (P20126    ), POLR_KYMVJ  (P36304    ), 
POLR_OYMV   (P20127    ), POLR_TYMV   (P10358    ), POLR_TYMVA  (P20128    ), 
POLR_TYMVC  (P28477    ), R1AB_BYVU   (Q08534    ), R1AB_GLRV3  (O71189    ), 
R1AB_LIYV9  (Q83045    ), R1A_GLRV3   (O71188    ), R1A_LIYV9   (Q83044    ), 
RDRP_ACLSA  (P54891    ), RDRP_ACLSP  (P27738    ), RDRP_ASPVP  (Q64962    ), 
RDRP_BBSCV  (Q65652    ), RDRP_BNYVS  (Q65667    ), RDRP_BOTVF  (Q9DRA1    ), 
RDRP_BOTVX  (Q6YNQ7    ), RDRP_CGMVS  (P69514    ), RDRP_CLBVS  (Q91QZ3    ), 
RDRP_FXMV   (P22168    ), RDRP_GFKVM  (Q8UZB6    ), RDRP_GVAIS  (Q67704    ), 
RDRP_HASV   (Q67724    ), RDRP_ICRSV  (Q918W3    ), RDRP_LOLV   (B1PS76    ), 
RDRP_NCBVS  (Q9YRB3    ), RDRP_NMV    (P15095    ), RDRP_ORSVC  (P89659    ), 
RDRP_ORSVS  (Q84133    ), RDRP_P1AMV  (Q07518    ), RDRP_PCV87  (Q84687    ), 
RDRP_PMMVJ  (P89657    ), RDRP_PMMVS  (P29098    ), RDRP_PMTVS  (Q9QBU0    ), 
RDRP_PMV    (P20951    ), RDRP_PVMR   (P17965    ), RDRP_PVX    (P09395    ), 
RDRP_PVXCP  (P22591    ), RDRP_PVXHB  (Q07630    ), RDRP_PVXX3  (P17779    ), 
RDRP_RBDVR  (Q05983    ), RDRP_SBWMN  (Q89249    ), RDRP_SHMV   (P89202    ), 
RDRP_SHVX   (Q04575    ), RDRP_SMYEA  (P28897    ), RDRP_SSDRV  (Q6YI57    ), 
RDRP_TBRFV  (A0A0S2T050), RDRP_TMGMV  (P18339    ), RDRP_TMOB   (P90211    ), 
RDRP_TMV    (P03586    ), RDRP_TMVB   (Q9YQ08    ), RDRP_TMVKR  (P30738    ), 
RDRP_TMVOM  (O93058    ), RDRP_TMVRA  (Q98745    ), RDRP_TOMK1  (Q9Q1T8    ), 
RDRP_TOMK2  (P89676    ), RDRP_TOML   (P03587    ), RDRP_TOMS1  (Q9YKD6    ), 
RDRP_TRVPP  (Q9J942    ), RDRP_TVCV   (Q88920    ), RDRP_WCMVM  (P09498    ), 
RDRP_WCMVO  (P15402    ), RDRP_YOMV   (Q66220    )
» more


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