PROSITE logo

PROSITE entry PS51879


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS51879

Direct ScanProsite submission
General information about the entry

Entry name [info] RST
Accession [info] PS51879
Entry type [info] MATRIX
Date [info] 13-FEB-2019 CREATED;
26-FEB-2020 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51879
Associated ProRule [info] PRU01227

Name and characterization of the entry

Description [info] RST domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=72;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=67;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.6216993; R2=0.0081038; TEXT='-LogE';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=9288.8437500; R2=6.3417087; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=849; H_SCORE=14673; N_SCORE=9.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=479; H_SCORE=12327; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-73; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 8 in 8 different sequences
Number of true positive hits 8 in 8 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] RST
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
8 sequences

RCD1_ARATH  (Q8RY59), SRO1_ARATH  (O82289), SRO2_ARATH  (Q9ZUD9), 
» more

PDB
[Detailed view]
3 PDB

5N9Q; 5OAO; 7AC1